RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 H3BNG1 76 aa10.25□□□□□ -0.77
CPSF7-202ENST00000394888 SNCGO76070 127 aa10.25□□□□□ -0.77
CPSF7-202ENST00000394888 F8P00451 2351 aa10.25□□□□□ -0.77
CPSF7-202ENST00000394888 IGLV6-57P01721 117 aa10.24□□□□□ -0.77
CPSF7-202ENST00000394888 Q8N814 137 aa10.23□□□□□ -0.77
CPSF7-202ENST00000394888 C15orf56Q8N910 161 aa10.23□□□□□ -0.77
CPSF7-202ENST00000394888 NBEAL1Q6ZS30 2694 aa10.23□□□□□ -0.77
CPSF7-202ENST00000394888 NCR3O14931 201 aa10.23□□□□□ -0.77
CPSF7-202ENST00000394888 SPAG11BQ08648 103 aa10.23□□□□□ -0.77
CPSF7-202ENST00000394888 FLNBO75369 2602 aaKnown RBP10.23□□□□□ -0.77
CPSF7-202ENST00000394888 GAGE2BQ13066 116 aa10.22□□□□□ -0.77
CPSF7-202ENST00000394888 GAGE2EQ4V326 116 aa10.22□□□□□ -0.77
CPSF7-202ENST00000394888 GAGE2DQ9UEU5 116 aa10.22□□□□□ -0.77
CPSF7-202ENST00000394888 ACYP1P07311 99 aa10.22□□□□□ -0.77
CPSF7-202ENST00000394888 KPRPQ5T749 579 aaPredicted RBP10.22□□□□□ -0.77
CPSF7-202ENST00000394888 C14orf132Q9NPU4 83 aa10.22□□□□□ -0.77
CPSF7-202ENST00000394888 ESRGQ1W209 222 aa10.21□□□□□ -0.77
CPSF7-202ENST00000394888 OR13C6PQ8NH95 151 aa10.2□□□□□ -0.78
CPSF7-202ENST00000394888 CFAP161Q6P656 301 aa10.19□□□□□ -0.78
CPSF7-202ENST00000394888 LINC00846Q9NV44 126 aa10.18□□□□□ -0.78
CPSF7-202ENST00000394888 CCDC179H3BU77 68 aa10.18□□□□□ -0.78
CPSF7-202ENST00000394888 C6orf99Q4VX62 202 aa10.18□□□□□ -0.78
CPSF7-202ENST00000394888 TMEM126AQ9H061 195 aa10.18□□□□□ -0.78
CPSF7-202ENST00000394888 LINC00575Q6W349 94 aa10.17□□□□□ -0.78
CPSF7-202ENST00000394888 ANAPC13Q9BS18 74 aa10.17□□□□□ -0.78
CPSF7-202ENST00000394888 HIST1H4AP62805 103 aaKnown RBP10.17□□□□□ -0.78
CPSF7-202ENST00000394888 A0A1B0GX51 115 aa10.16□□□□□ -0.78
CPSF7-202ENST00000394888 LINC00643Q86TS7 51 aa10.16□□□□□ -0.78
CPSF7-202ENST00000394888 INAFM2P0DMQ5 153 aa10.15□□□□□ -0.78
CPSF7-202ENST00000394888 GAGE2AQ6NT46 116 aa10.15□□□□□ -0.78
CPSF7-202ENST00000394888 MUC7Q8TAX7 377 aa10.15□□□□□ -0.78
CPSF7-202ENST00000394888 PLECQ15149 4684 aaKnown RBP10.15□□□□□ -0.79
CPSF7-202ENST00000394888 VPREB1P12018 145 aa10.14□□□□□ -0.79
CPSF7-202ENST00000394888 IMUPQ9GZP8 106 aa10.14□□□□□ -0.79
CPSF7-202ENST00000394888 NOTCH1P46531 2555 aa10.14□□□□□ -0.79
CPSF7-202ENST00000394888 PRKDCP78527 4128 aaKnown RBP10.14□□□□□ -0.79
CPSF7-202ENST00000394888 ORMDL1Q9P0S3 153 aa10.13□□□□□ -0.79
CPSF7-202ENST00000394888 DNAL4O96015 105 aa10.13□□□□□ -0.79
CPSF7-202ENST00000394888 Q6ZRU5 148 aa10.13□□□□□ -0.79
CPSF7-202ENST00000394888 M0R2N4 97 aa10.12□□□□□ -0.79
CPSF7-202ENST00000394888 XAGE1AQ9HD64 81 aa10.12□□□□□ -0.79
CPSF7-202ENST00000394888 TRBV10-3A0A0K0K1G6 114 aa10.12□□□□□ -0.79
CPSF7-202ENST00000394888 RPL18AQ02543 176 aaKnown RBP10.12□□□□□ -0.79
CPSF7-202ENST00000394888 HIGD2BQ4VC39 106 aa10.12□□□□□ -0.79
CPSF7-202ENST00000394888 CCKP06307 115 aa10.11□□□□□ -0.79
CPSF7-202ENST00000394888 LINC01556Q5JQF7 62 aa10.1□□□□□ -0.79
CPSF7-202ENST00000394888 Q6ZRP5 223 aa10.09□□□□□ -0.79
CPSF7-202ENST00000394888 KRTAP7-1Q8IUC3 87 aa10.08□□□□□ -0.8
CPSF7-202ENST00000394888 FAM236AA0A1B0GUQ0 79 aa10.08□□□□□ -0.8
CPSF7-202ENST00000394888 FAM236BA0A1B0GV22 79 aa10.08□□□□□ -0.8
CPSF7-202ENST00000394888 C2orf48Q96LS8 159 aa10.07□□□□□ -0.8
CPSF7-202ENST00000394888 CASC10Q5T4H9 136 aa10.07□□□□□ -0.8
CPSF7-202ENST00000394888 STARD9Q9P2P6 4700 aa10.07□□□□□ -0.8
CPSF7-202ENST00000394888 DNAH10OSP0CZ25 163 aa10.06□□□□□ -0.8
CPSF7-202ENST00000394888 Q6ZQT0 140 aa10.05□□□□□ -0.8
CPSF7-202ENST00000394888 DEFB131BA0A096LNP1 70 aa10.05□□□□□ -0.8
CPSF7-202ENST00000394888 TMEM256-PLSCR3K7ERE1 68 aa10.05□□□□□ -0.8
CPSF7-202ENST00000394888 ELOF1P60002 83 aaKnown RBP10.05□□□□□ -0.8
CPSF7-202ENST00000394888 Q6JHZ5 121 aa10.05□□□□□ -0.8
CPSF7-202ENST00000394888 TRAV23DV6A0A075B6W5 121 aa10.04□□□□□ -0.8
CPSF7-202ENST00000394888 hADV29S1A0JD25 119 aa10.04□□□□□ -0.8
CPSF7-202ENST00000394888 TM2D3Q9BRN9 247 aa10.04□□□□□ -0.8
CPSF7-202ENST00000394888 NDUFC2-KCTD14E9PQ53 114 aa10.03□□□□□ -0.8
CPSF7-202ENST00000394888 PRB2P02812 416 aaPredicted RBP10.03□□□□□ -0.8
CPSF7-202ENST00000394888 S100A7L2Q5SY68 101 aa10.03□□□□□ -0.8
CPSF7-202ENST00000394888 B5MCH6 92 aa10.03□□□□□ -0.8
CPSF7-202ENST00000394888 C11orf45Q8TAV5 145 aa10.03□□□□□ -0.8
CPSF7-202ENST00000394888 LINC00588Q9Y4M8 146 aa10.03□□□□□ -0.8
CPSF7-202ENST00000394888 LOC110117498A0A087WWA1 95 aa10.02□□□□□ -0.8
CPSF7-202ENST00000394888 COL6A5A8TX70 2615 aa10.02□□□□□ -0.81
CPSF7-202ENST00000394888 HECTD4Q9Y4D8 3996 aa10.02□□□□□ -0.81
CPSF7-202ENST00000394888 SERTAD4-AS1Q5TG53 156 aa10.01□□□□□ -0.81
CPSF7-202ENST00000394888 CAMK2N2Q96S95 79 aa10.01□□□□□ -0.81
CPSF7-202ENST00000394888 K7EIL1 84 aa10.01□□□□□ -0.81
CPSF7-202ENST00000394888 ZNF73O43830 326 aaPredicted RBP10.01□□□□□ -0.81
CPSF7-202ENST00000394888 LINC00528Q8N1L1 170 aa10.01□□□□□ -0.81
CPSF7-202ENST00000394888 VPS13DQ5THJ4 4388 aa10.01□□□□□ -0.81
CPSF7-202ENST00000394888 A0A087WVE0 104 aa10□□□□□ -0.81
CPSF7-202ENST00000394888 JMJD7-PLA2G4BH0Y9G9 81 aa10□□□□□ -0.81
CPSF7-202ENST00000394888 Q6ZQY7 126 aa10□□□□□ -0.81
CPSF7-202ENST00000394888 CYSTM1Q9H1C7 97 aa10□□□□□ -0.81
CPSF7-202ENST00000394888 IGKV3D-7A0A0C4DH55 119 aa9.99□□□□□ -0.81
CPSF7-202ENST00000394888 TRBV7-6A0A0J9YX20 115 aa9.99□□□□□ -0.81
CPSF7-202ENST00000394888 ZNF561-AS1K7EIQ3 104 aa9.99□□□□□ -0.81
CPSF7-202ENST00000394888 C3orf56Q8N813 242 aa9.98□□□□□ -0.81
CPSF7-202ENST00000394888 DNAH2Q9P225 4427 aa9.98□□□□□ -0.81
CPSF7-202ENST00000394888 KRTAP4-16G5E9R7 235 aaPredicted RBP9.98□□□□□ -0.81
CPSF7-202ENST00000394888 SS18L2Q9UHA2 77 aa9.97□□□□□ -0.81
CPSF7-202ENST00000394888 TRBV7-4A0A0J9YYF1 115 aa9.97□□□□□ -0.81
CPSF7-202ENST00000394888 DIRC1Q969H9 104 aa9.96□□□□□ -0.81
CPSF7-202ENST00000394888 M0R378 163 aa9.96□□□□□ -0.82
CPSF7-202ENST00000394888 TLX1NBP0CAT3 122 aa9.95□□□□□ -0.82
CPSF7-202ENST00000394888 LINC01547P58512 204 aaPredicted RBP9.95□□□□□ -0.82
CPSF7-202ENST00000394888 KMT2AQ03164 3969 aa9.95□□□□□ -0.82
CPSF7-202ENST00000394888 TENM2Q9NT68 2774 aa9.94□□□□□ -0.82
CPSF7-202ENST00000394888 C1orf43Q9BWL3 253 aa9.94□□□□□ -0.82
CPSF7-202ENST00000394888 FAM168BA1KXE4 195 aa9.94□□□□□ -0.82
CPSF7-202ENST00000394888 KRTAP1-5Q9BYS1 174 aa9.94□□□□□ -0.82
CPSF7-202ENST00000394888 FBN3Q75N90 2809 aa9.94□□□□□ -0.82
CPSF7-202ENST00000394888 IGKV2D-24A0A075B6R9 120 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms