RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 LGALS3P17931 250 aaKnown RBP11.72□□□□□ -0.53
PDLIM7-204ENST00000393546 TSPEAR-AS2P59090 65 aa11.72□□□□□ -0.53
PDLIM7-204ENST00000393546 MRPL55Q7Z7F7 128 aaKnown RBP11.72□□□□□ -0.53
PDLIM7-204ENST00000393546 MYCBP2O75592 4640 aa11.72□□□□□ -0.53
PDLIM7-204ENST00000393546 E9PLD3 99 aa11.71□□□□□ -0.53
PDLIM7-204ENST00000393546 NMUP48645 174 aa11.71□□□□□ -0.53
PDLIM7-204ENST00000393546 KRTAP11-1Q8IUC1 163 aa11.71□□□□□ -0.53
PDLIM7-204ENST00000393546 NKAPP1Q8N9T2 125 aa11.71□□□□□ -0.53
PDLIM7-204ENST00000393546 IGLV5-37A0A075B6J1 123 aa11.7□□□□□ -0.54
PDLIM7-204ENST00000393546 C20orf202A1L168 122 aa11.7□□□□□ -0.54
PDLIM7-204ENST00000393546 KRTAP29-1A8MX34 341 aaPredicted RBP11.7□□□□□ -0.54
PDLIM7-204ENST00000393546 S100A2P29034 98 aa11.7□□□□□ -0.54
PDLIM7-204ENST00000393546 RPL24P83731 157 aaKnown RBP11.7□□□□□ -0.54
PDLIM7-204ENST00000393546 SPINK6Q6UWN8 80 aa11.7□□□□□ -0.54
PDLIM7-204ENST00000393546 OXTP01178 125 aa11.69□□□□□ -0.54
PDLIM7-204ENST00000393546 SRSF9Q13242 221 aaKnown RBP eCLIP11.69□□□□□ -0.54
PDLIM7-204ENST00000393546 HIST3H2BBQ8N257 126 aa11.69□□□□□ -0.54
PDLIM7-204ENST00000393546 J3QL48 77 aa11.68□□□□□ -0.54
PDLIM7-204ENST00000393546 LINC00167Q96N53 147 aa11.68□□□□□ -0.54
PDLIM7-204ENST00000393546 MIR7-3HGQ8N6C7 128 aa11.67□□□□□ -0.54
PDLIM7-204ENST00000393546 GAGE10A6NGK3 116 aa11.66□□□□□ -0.54
PDLIM7-204ENST00000393546 IGLV7-43P04211 117 aa11.66□□□□□ -0.54
PDLIM7-204ENST00000393546 VPREB1P12018 145 aa11.66□□□□□ -0.54
PDLIM7-204ENST00000393546 AKR1D1P51857 326 aa11.66□□□□□ -0.54
PDLIM7-204ENST00000393546 HIST1H2BLQ99880 126 aa11.65□□□□□ -0.54
PDLIM7-204ENST00000393546 RPL37AP8A6NKH3 93 aa11.64□□□□□ -0.55
PDLIM7-204ENST00000393546 FAT3Q8TDW7 4589 aa11.63□□□□□ -0.55
PDLIM7-204ENST00000393546 DMBT1Q9UGM3 2413 aaPredicted RBP11.62□□□□□ -0.55
PDLIM7-204ENST00000393546 LRP1Q07954 4544 aaKnown RBP11.62□□□□□ -0.55
PDLIM7-204ENST00000393546 SNRPEP62304 92 aaKnown RBP11.62□□□□□ -0.55
PDLIM7-204ENST00000393546 REG3GQ6UW15 175 aa11.61□□□□□ -0.55
PDLIM7-204ENST00000393546 BOD1L2Q8IYS8 172 aa11.61□□□□□ -0.55
PDLIM7-204ENST00000393546 A0A0J9YXY3 114 aa11.6□□□□□ -0.55
PDLIM7-204ENST00000393546 Q8NDZ9 215 aa11.6□□□□□ -0.55
PDLIM7-204ENST00000393546 ATOH7Q8N100 152 aa11.59□□□□□ -0.55
PDLIM7-204ENST00000393546 DAND5Q8N907 189 aa11.59□□□□□ -0.55
PDLIM7-204ENST00000393546 DIRC1Q969H9 104 aa11.59□□□□□ -0.55
PDLIM7-204ENST00000393546 IGKV2-28A0A075B6P5 120 aa11.58□□□□□ -0.56
PDLIM7-204ENST00000393546 IGKV2D-26A0A0A0MRZ7 120 aa11.58□□□□□ -0.56
PDLIM7-204ENST00000393546 C5orf52A6NGY3 159 aa11.58□□□□□ -0.56
PDLIM7-204ENST00000393546 M0R378 163 aa11.58□□□□□ -0.56
PDLIM7-204ENST00000393546 IGKV2D-28P01615 120 aa11.58□□□□□ -0.56
PDLIM7-204ENST00000393546 IGLV1-50A0A075B6I6 118 aa11.57□□□□□ -0.56
PDLIM7-204ENST00000393546 LOC107984156A0A0G2JMH3 177 aa11.57□□□□□ -0.56
PDLIM7-204ENST00000393546 ZNF815PA8K554 130 aa11.57□□□□□ -0.56
PDLIM7-204ENST00000393546 BCE1O60756 84 aa11.57□□□□□ -0.56
PDLIM7-204ENST00000393546 ARL17AQ8IVW1 177 aa11.57□□□□□ -0.56
PDLIM7-204ENST00000393546 MIEN1Q9BRT3 115 aa11.57□□□□□ -0.56
PDLIM7-204ENST00000393546 ZNF861PO60384 105 aa11.56□□□□□ -0.56
PDLIM7-204ENST00000393546 ANKRD39Q53RE8 183 aa11.55□□□□□ -0.56
PDLIM7-204ENST00000393546 H0Y9J4 135 aa11.54□□□□□ -0.56
PDLIM7-204ENST00000393546 ADAMTSL4-AS1Q5T5F5 129 aa11.54□□□□□ -0.56
PDLIM7-204ENST00000393546 LINC01600Q96MT4 127 aa11.54□□□□□ -0.56
PDLIM7-204ENST00000393546 TTTY13Q9BZ97 58 aa11.54□□□□□ -0.56
PDLIM7-204ENST00000393546 TIMM17BO60830 172 aa11.53□□□□□ -0.56
PDLIM7-204ENST00000393546 RPL28P46779 137 aaKnown RBP11.53□□□□□ -0.56
PDLIM7-204ENST00000393546 NCR3O14931 201 aa11.52□□□□□ -0.57
PDLIM7-204ENST00000393546 TMEM126AQ9H061 195 aa11.51□□□□□ -0.57
PDLIM7-204ENST00000393546 TMEM238C9JI98 176 aa11.5□□□□□ -0.57
PDLIM7-204ENST00000393546 UBE2AP49459 152 aa11.5□□□□□ -0.57
PDLIM7-204ENST00000393546 NPC2P61916 151 aa11.5□□□□□ -0.57
PDLIM7-204ENST00000393546 TRBV10-2A0A0K0K1G8 114 aa11.49□□□□□ -0.57
PDLIM7-204ENST00000393546 HSBP1L1C9JCN9 74 aa11.49□□□□□ -0.57
PDLIM7-204ENST00000393546 NDUFC2O95298 119 aa11.49□□□□□ -0.57
PDLIM7-204ENST00000393546 SCGB1D1O95968 90 aa11.49□□□□□ -0.57
PDLIM7-204ENST00000393546 MT1HL1P0DM35 61 aa11.49□□□□□ -0.57
PDLIM7-204ENST00000393546 SCGB1D4Q6XE38 83 aa11.49□□□□□ -0.57
PDLIM7-204ENST00000393546 LITAFQ99732 161 aa11.49□□□□□ -0.57
PDLIM7-204ENST00000393546 SOSTDC1Q6X4U4 206 aa11.48□□□□□ -0.57
PDLIM7-204ENST00000393546 SPANXB1Q9NS25 103 aaPredicted RBP11.48□□□□□ -0.57
PDLIM7-204ENST00000393546 FAM19A1Q7Z5A9 133 aa11.47□□□□□ -0.57
PDLIM7-204ENST00000393546 LINC00308Q8TCZ7 52 aa11.47□□□□□ -0.57
PDLIM7-204ENST00000393546 HERC1Q15751 4861 aa11.47□□□□□ -0.57
PDLIM7-204ENST00000393546 S100A12P80511 92 aa11.46□□□□□ -0.57
PDLIM7-204ENST00000393546 PCP2Q8IVA1 136 aa11.46□□□□□ -0.57
PDLIM7-204ENST00000393546 TRBV10-3A0A0K0K1G6 114 aa11.45□□□□□ -0.58
PDLIM7-204ENST00000393546 PRYO14603 147 aa11.45□□□□□ -0.58
PDLIM7-204ENST00000393546 EIF4EBP3O60516 100 aaPredicted RBP11.45□□□□□ -0.58
PDLIM7-204ENST00000393546 KRTAP13-1Q8IUC0 172 aa11.45□□□□□ -0.58
PDLIM7-204ENST00000393546 KCNQ1DNQ9H478 68 aa11.45□□□□□ -0.58
PDLIM7-204ENST00000393546 DDTP30046 118 aa11.44□□□□□ -0.58
PDLIM7-204ENST00000393546 KRTAP10-8P60410 259 aa11.44□□□□□ -0.58
PDLIM7-204ENST00000393546 PRLHP81277 87 aa11.43□□□□□ -0.58
PDLIM7-204ENST00000393546 S100A7L2Q5SY68 101 aa11.43□□□□□ -0.58
PDLIM7-204ENST00000393546 SPANXDQ9BXN6 97 aa11.42□□□□□ -0.58
PDLIM7-204ENST00000393546 SPANXCQ9NY87 97 aa11.42□□□□□ -0.58
PDLIM7-204ENST00000393546 TNXBP22105 4242 aa11.42□□□□□ -0.58
PDLIM7-204ENST00000393546 KRTAP1-4P0C5Y4 121 aa11.41□□□□□ -0.58
PDLIM7-204ENST00000393546 COPS9Q8WXC6 57 aa11.41□□□□□ -0.58
PDLIM7-204ENST00000393546 Q6ZVH6 145 aa11.4□□□□□ -0.58
PDLIM7-204ENST00000393546 LINC00337Q8N6G1 96 aa11.4□□□□□ -0.58
PDLIM7-204ENST00000393546 ETDCA0A1B0GVM5 59 aa11.39□□□□□ -0.59
PDLIM7-204ENST00000393546 IGLV6-57P01721 117 aa11.39□□□□□ -0.59
PDLIM7-204ENST00000393546 IFITM1P13164 125 aa11.39□□□□□ -0.59
PDLIM7-204ENST00000393546 SPRR1AP35321 89 aa11.39□□□□□ -0.59
PDLIM7-204ENST00000393546 PRR26Q8N8Z3 221 aa11.39□□□□□ -0.59
PDLIM7-204ENST00000393546 LINC00518Q8N0U6 118 aa11.37□□□□□ -0.59
PDLIM7-204ENST00000393546 CBY1Q9Y3M2 126 aa11.37□□□□□ -0.59
PDLIM7-204ENST00000393546 OR13C6PQ8NH95 151 aa11.36□□□□□ -0.59
PDLIM7-204ENST00000393546 HIGD2AQ9BW72 106 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms