RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 C11orf72Q8NBR9 251 aa9.72□□□□□ -0.85
SNPH-201ENST00000381867 FAM218AQ96MZ4 157 aa9.72□□□□□ -0.85
SNPH-201ENST00000381867 PRLHP81277 87 aa9.72□□□□□ -0.85
SNPH-201ENST00000381867 ZFYVE26Q68DK2 2539 aa9.72□□□□□ -0.85
SNPH-201ENST00000381867 IGLV5-45A0A087WSX0 123 aa9.72□□□□□ -0.85
SNPH-201ENST00000381867 SMCR5Q8TEV8 140 aa9.71□□□□□ -0.86
SNPH-201ENST00000381867 COL27A1Q8IZC6 1860 aaPredicted RBP9.71□□□□□ -0.86
SNPH-201ENST00000381867 ABCA12Q86UK0 2595 aa9.71□□□□□ -0.86
SNPH-201ENST00000381867 GOLGB1Q14789 3259 aaKnown RBP9.7□□□□□ -0.86
SNPH-201ENST00000381867 A0A1B0GW54 56 aa9.7□□□□□ -0.86
SNPH-201ENST00000381867 C22orf24Q9Y442 160 aa9.7□□□□□ -0.86
SNPH-201ENST00000381867 FAM19A4Q96LR4 140 aa9.7□□□□□ -0.86
SNPH-201ENST00000381867 TP53AIP1Q9HCN2 124 aa9.7□□□□□ -0.86
SNPH-201ENST00000381867 A0A1B0GU69 56 aa9.69□□□□□ -0.86
SNPH-201ENST00000381867 CENPFP49454 3210 aa9.69□□□□□ -0.86
SNPH-201ENST00000381867 LRRK2Q5S007 2527 aa9.68□□□□□ -0.86
SNPH-201ENST00000381867 Q6ZQT0 140 aa9.68□□□□□ -0.86
SNPH-201ENST00000381867 LOC110117498A0A087WWA1 95 aa9.67□□□□□ -0.86
SNPH-201ENST00000381867 AGRNO00468 2067 aa9.67□□□□□ -0.86
SNPH-201ENST00000381867 KRTAP24-1Q3LI83 254 aa9.67□□□□□ -0.86
SNPH-201ENST00000381867 A0A096LNT2 108 aa9.67□□□□□ -0.86
SNPH-201ENST00000381867 SPAG11AQ6PDA7 123 aa9.66□□□□□ -0.86
SNPH-201ENST00000381867 USP9YO00507 2555 aaPredicted RBP9.66□□□□□ -0.86
SNPH-201ENST00000381867 H3BPC8 53 aa9.66□□□□□ -0.86
SNPH-201ENST00000381867 TLN2Q9Y4G6 2542 aa9.65□□□□□ -0.86
SNPH-201ENST00000381867 ACYP2P14621 99 aa9.65□□□□□ -0.86
SNPH-201ENST00000381867 SERTAD4-AS1Q5TG53 156 aa9.65□□□□□ -0.86
SNPH-201ENST00000381867 H3BNG1 76 aa9.64□□□□□ -0.87
SNPH-201ENST00000381867 ELOF1P60002 83 aaKnown RBP9.64□□□□□ -0.87
SNPH-201ENST00000381867 TET2Q6N021 2002 aaPredicted RBP9.64□□□□□ -0.87
SNPH-201ENST00000381867 IGKV2D-30A0A075B6S6 120 aa9.63□□□□□ -0.87
SNPH-201ENST00000381867 IGKV2-30P06310 120 aa9.63□□□□□ -0.87
SNPH-201ENST00000381867 C7orf65Q6ZTY9 151 aa9.63□□□□□ -0.87
SNPH-201ENST00000381867 MDFIQ99750 246 aa9.62□□□□□ -0.87
SNPH-201ENST00000381867 C6orf48Q9UBA6 75 aa9.62□□□□□ -0.87
SNPH-201ENST00000381867 TM2D3Q9BRN9 247 aa9.61□□□□□ -0.87
SNPH-201ENST00000381867 LINC00167Q96N53 147 aa9.61□□□□□ -0.87
SNPH-201ENST00000381867 Q8NBF4 154 aa9.6□□□□□ -0.87
SNPH-201ENST00000381867 FN1P02751 2386 aaKnown RBP9.59□□□□□ -0.87
SNPH-201ENST00000381867 ANKRD17O75179 2603 aaKnown RBP9.58□□□□□ -0.88
SNPH-201ENST00000381867 SETD2Q9BYW2 2564 aaPredicted RBP9.57□□□□□ -0.88
SNPH-201ENST00000381867 TRAV22A0A0B4J277 110 aa9.56□□□□□ -0.88
SNPH-201ENST00000381867 FASNP49327 2511 aaKnown RBP9.56□□□□□ -0.88
SNPH-201ENST00000381867 EPG5Q9HCE0 2579 aa9.56□□□□□ -0.88
SNPH-201ENST00000381867 C8orf87E5RJ46 101 aa9.55□□□□□ -0.88
SNPH-201ENST00000381867 LINC00476Q8WZB0 136 aa9.55□□□□□ -0.88
SNPH-201ENST00000381867 ATP11AUNQ6ZP68 121 aa9.55□□□□□ -0.88
SNPH-201ENST00000381867 Q6ZRX8 168 aa9.55□□□□□ -0.88
SNPH-201ENST00000381867 LITAFQ99732 161 aa9.54□□□□□ -0.88
SNPH-201ENST00000381867 MOBPQ13875 183 aa9.53□□□□□ -0.88
SNPH-201ENST00000381867 ERC2-IT1O76042 136 aa9.53□□□□□ -0.88
SNPH-201ENST00000381867 KRTAP1-3Q8IUG1 177 aa9.48□□□□□ -0.89
SNPH-201ENST00000381867 FAM229AH3BQW9 127 aa9.47□□□□□ -0.89
SNPH-201ENST00000381867 CYP4F30PQ9H0H9 118 aa9.47□□□□□ -0.89
SNPH-201ENST00000381867 Q8NAQ8 132 aa9.47□□□□□ -0.89
SNPH-201ENST00000381867 ST20-AS1Q8NBB2 130 aa9.47□□□□□ -0.89
SNPH-201ENST00000381867 SPACA4Q8TDM5 124 aa9.47□□□□□ -0.89
SNPH-201ENST00000381867 TRBV7-4A0A0J9YYF1 115 aa9.46□□□□□ -0.89
SNPH-201ENST00000381867 VPREB1P12018 145 aa9.45□□□□□ -0.9
SNPH-201ENST00000381867 RPL37AP61513 92 aaKnown RBP9.45□□□□□ -0.9
SNPH-201ENST00000381867 A8MUN3 132 aa9.45□□□□□ -0.9
SNPH-201ENST00000381867 GVQW2A0A096LPI5 108 aaPredicted RBP9.45□□□□□ -0.9
SNPH-201ENST00000381867 LOC101927531A0A1B0GV80 90 aa9.44□□□□□ -0.9
SNPH-201ENST00000381867 IGLV6-57P01721 117 aa9.44□□□□□ -0.9
SNPH-201ENST00000381867 EPM2AB3EWF7 344 aa9.43□□□□□ -0.9
SNPH-201ENST00000381867 MTORP42345 2549 aa9.43□□□□□ -0.9
SNPH-201ENST00000381867 LINC00313P59037 77 aa9.43□□□□□ -0.9
SNPH-201ENST00000381867 COA5Q86WW8 74 aa9.42□□□□□ -0.9
SNPH-201ENST00000381867 C16orf90A8MZG2 172 aa9.42□□□□□ -0.9
SNPH-201ENST00000381867 PHF5AQ7RTV0 110 aaKnown RBP9.42□□□□□ -0.9
SNPH-201ENST00000381867 MUC4Q99102 2169 aa9.42□□□□□ -0.9
SNPH-201ENST00000381867 A8MWP4 228 aa9.41□□□□□ -0.9
SNPH-201ENST00000381867 POLQO75417 2590 aa9.41□□□□□ -0.9
SNPH-201ENST00000381867 K7EQZ3 153 aa9.41□□□□□ -0.9
SNPH-201ENST00000381867 KLKP1Q107X0 134 aa9.41□□□□□ -0.9
SNPH-201ENST00000381867 IGLV8-61A0A075B6I0 122 aa9.41□□□□□ -0.9
SNPH-201ENST00000381867 NBDYA0A0U1RRE5 68 aa9.4□□□□□ -0.9
SNPH-201ENST00000381867 WWC2-AS2Q96NR7 200 aa9.4□□□□□ -0.9
SNPH-201ENST00000381867 RTL8CO15255 209 aa9.4□□□□□ -0.9
SNPH-201ENST00000381867 KRTAP1-1Q07627 177 aa9.4□□□□□ -0.91
SNPH-201ENST00000381867 SPINT4Q6UDR6 99 aa9.4□□□□□ -0.91
SNPH-201ENST00000381867 C19orf73Q9NVV2 129 aa9.38□□□□□ -0.91
SNPH-201ENST00000381867 Q6ZRP5 223 aa9.36□□□□□ -0.91
SNPH-201ENST00000381867 CSNK1G2-AS1Q8NCQ2 148 aa9.36□□□□□ -0.91
SNPH-201ENST00000381867 F8P00451 2351 aa9.36□□□□□ -0.91
SNPH-201ENST00000381867 LINC01600Q96MT4 127 aa9.36□□□□□ -0.91
SNPH-201ENST00000381867 DNAH12Q6ZR08 3092 aa9.35□□□□□ -0.91
SNPH-201ENST00000381867 MRPL34Q9BQ48 92 aaKnown RBP9.35□□□□□ -0.91
SNPH-201ENST00000381867 ACANP16112 2415 aa9.35□□□□□ -0.91
SNPH-201ENST00000381867 LINC00588Q9Y4M8 146 aa9.35□□□□□ -0.91
SNPH-201ENST00000381867 UQCR11O14957 56 aa9.34□□□□□ -0.91
SNPH-201ENST00000381867 LINC00336Q6ZUF6 198 aa9.34□□□□□ -0.91
SNPH-201ENST00000381867 CHD9Q3L8U1 2897 aa9.33□□□□□ -0.92
SNPH-201ENST00000381867 CD164Q04900 197 aa9.32□□□□□ -0.92
SNPH-201ENST00000381867 TYMSOSQ8TAI1 123 aa9.32□□□□□ -0.92
SNPH-201ENST00000381867 LINC00528Q8N1L1 170 aa9.32□□□□□ -0.92
SNPH-201ENST00000381867 H7BZZ5 65 aa9.32□□□□□ -0.92
SNPH-201ENST00000381867 EIF4EBP3O60516 100 aaPredicted RBP9.31□□□□□ -0.92
SNPH-201ENST00000381867 CHTF8P0CG12 524 aa9.31□□□□□ -0.92
SNPH-201ENST00000381867 DNAH10OSP0CZ25 163 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms