RNA–Protein interactions for RNA: ENST00000380874.3

FOXC1-201, Transcript of forkhead box C1, humanhuman

APPRIS P1 BASIC

Gene FOXC1, Length 3,926 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1-201ENST00000380874 NHLRC4P0CG21 123 aaPredicted RBP13.33□□□□□ -0.28
FOXC1-201ENST00000380874 Q6ZTC4 211 aa13.33□□□□□ -0.28
FOXC1-201ENST00000380874 COX17Q14061 63 aa13.32□□□□□ -0.28
FOXC1-201ENST00000380874 Q8N814 137 aa13.32□□□□□ -0.28
FOXC1-201ENST00000380874 LYPD5Q6UWN5 251 aa13.31□□□□□ -0.28
FOXC1-201ENST00000380874 hADV29S1A0JD25 119 aa13.31□□□□□ -0.28
FOXC1-201ENST00000380874 KIAA0087Q14695 138 aa13.31□□□□□ -0.28
FOXC1-201ENST00000380874 LINC00846Q9NV44 126 aa13.31□□□□□ -0.28
FOXC1-201ENST00000380874 HAMPP81172 84 aa13.3□□□□□ -0.28
FOXC1-201ENST00000380874 JMJD7-PLA2G4BH0Y9G9 81 aa13.3□□□□□ -0.28
FOXC1-201ENST00000380874 UBL5Q9BZL1 73 aa13.3□□□□□ -0.28
FOXC1-201ENST00000380874 LINC01600Q96MT4 127 aa13.29□□□□□ -0.28
FOXC1-201ENST00000380874 A0A087WVE0 104 aa13.28□□□□□ -0.28
FOXC1-201ENST00000380874 NANOS2P60321 138 aaKnown RBP13.28□□□□□ -0.28
FOXC1-201ENST00000380874 A0A1B0GX51 115 aa13.28□□□□□ -0.28
FOXC1-201ENST00000380874 Q6ZQY7 126 aa13.28□□□□□ -0.28
FOXC1-201ENST00000380874 KLK5Q9Y337 293 aaPredicted RBP13.28□□□□□ -0.28
FOXC1-201ENST00000380874 TRBV7-7A0A0K0K1E9 115 aa13.27□□□□□ -0.29
FOXC1-201ENST00000380874 DSCR8Q96T75 97 aa13.27□□□□□ -0.29
FOXC1-201ENST00000380874 TENM1Q9UKZ4 2725 aa13.27□□□□□ -0.29
FOXC1-201ENST00000380874 RBM3P98179 157 aaKnown RBP13.27□□□□□ -0.29
FOXC1-201ENST00000380874 WFDC9Q8NEX5 89 aa13.27□□□□□ -0.29
FOXC1-201ENST00000380874 DIRC1Q969H9 104 aa13.27□□□□□ -0.29
FOXC1-201ENST00000380874 DEFB131BA0A096LNP1 70 aa13.26□□□□□ -0.29
FOXC1-201ENST00000380874 TRBV10-3A0A0K0K1G6 114 aa13.26□□□□□ -0.29
FOXC1-201ENST00000380874 IMUPQ9GZP8 106 aa13.26□□□□□ -0.29
FOXC1-201ENST00000380874 LINC01561Q8N1V8 128 aa13.25□□□□□ -0.29
FOXC1-201ENST00000380874 NDUFC2O95298 119 aa13.25□□□□□ -0.29
FOXC1-201ENST00000380874 ENHOQ6UWT2 76 aa13.25□□□□□ -0.29
FOXC1-201ENST00000380874 A0A0J9YWU9 116 aa13.24□□□□□ -0.29
FOXC1-201ENST00000380874 C11orf45Q8TAV5 145 aa13.24□□□□□ -0.29
FOXC1-201ENST00000380874 OTOGQ6ZRI0 2925 aa13.22□□□□□ -0.29
FOXC1-201ENST00000380874 DEFB105AQ8NG35 78 aa13.22□□□□□ -0.29
FOXC1-201ENST00000380874 PPDPFQ9H3Y8 114 aa13.22□□□□□ -0.29
FOXC1-201ENST00000380874 TRAV23DV6A0A075B6W5 121 aa13.22□□□□□ -0.29
FOXC1-201ENST00000380874 J3KT08 172 aa13.21□□□□□ -0.29
FOXC1-201ENST00000380874 NKAPP1Q8N9T2 125 aa13.21□□□□□ -0.29
FOXC1-201ENST00000380874 C6orf48Q9UBA6 75 aa13.2□□□□□ -0.3
FOXC1-201ENST00000380874 COX7BP24311 80 aa13.2□□□□□ -0.3
FOXC1-201ENST00000380874 CCKP06307 115 aa13.2□□□□□ -0.3
FOXC1-201ENST00000380874 UQCRQO14949 82 aa13.2□□□□□ -0.3
FOXC1-201ENST00000380874 C22orf24Q9Y442 160 aa13.2□□□□□ -0.3
FOXC1-201ENST00000380874 ATOX1O00244 68 aa13.19□□□□□ -0.3
FOXC1-201ENST00000380874 LINC00575Q6W349 94 aa13.18□□□□□ -0.3
FOXC1-201ENST00000380874 Q6ZRU5 148 aa13.16□□□□□ -0.3
FOXC1-201ENST00000380874 Q8NDZ9 215 aa13.16□□□□□ -0.3
FOXC1-201ENST00000380874 ZNF73O43830 326 aaPredicted RBP13.16□□□□□ -0.3
FOXC1-201ENST00000380874 C3orf22Q8N5N4 141 aa13.16□□□□□ -0.3
FOXC1-201ENST00000380874 ESRGQ1W209 222 aa13.16□□□□□ -0.3
FOXC1-201ENST00000380874 GHRHP01286 108 aa13.14□□□□□ -0.31
FOXC1-201ENST00000380874 Q6JHZ5 121 aa13.14□□□□□ -0.31
FOXC1-201ENST00000380874 SCXQ7RTU7 201 aa13.13□□□□□ -0.31
FOXC1-201ENST00000380874 USP17L23D6RBM5 183 aa13.12□□□□□ -0.31
FOXC1-201ENST00000380874 KRTAP10-11P60412 298 aa13.12□□□□□ -0.31
FOXC1-201ENST00000380874 SYCNQ0VAF6 134 aa13.12□□□□□ -0.31
FOXC1-201ENST00000380874 PRR34Q9NV39 138 aa13.11□□□□□ -0.31
FOXC1-201ENST00000380874 FAM19A1Q7Z5A9 133 aa13.1□□□□□ -0.31
FOXC1-201ENST00000380874 UPK3BQ9BT76 320 aa13.1□□□□□ -0.31
FOXC1-201ENST00000380874 AKAP9Q99996 3911 aa13.09□□□□□ -0.31
FOXC1-201ENST00000380874 EGFEM1PQ0D2K5 195 aa13.08□□□□□ -0.32
FOXC1-201ENST00000380874 KRTAP24-1Q3LI83 254 aa13.08□□□□□ -0.32
FOXC1-201ENST00000380874 COX7CP15954 63 aa13.07□□□□□ -0.32
FOXC1-201ENST00000380874 M0R378 163 aa13.07□□□□□ -0.32
FOXC1-201ENST00000380874 ANK3Q12955 4377 aaKnown RBP13.07□□□□□ -0.32
FOXC1-201ENST00000380874 C5orf47Q569G3 176 aa13.06□□□□□ -0.32
FOXC1-201ENST00000380874 MUC7Q8TAX7 377 aa13.06□□□□□ -0.32
FOXC1-201ENST00000380874 KMT2BQ9UMN6 2715 aaPredicted RBP13.05□□□□□ -0.32
FOXC1-201ENST00000380874 RPL37AP8A6NKH3 93 aa13.05□□□□□ -0.32
FOXC1-201ENST00000380874 NDUFC2-KCTD14E9PQ53 114 aa13.05□□□□□ -0.32
FOXC1-201ENST00000380874 IGLV6-57P01721 117 aa13.03□□□□□ -0.32
FOXC1-201ENST00000380874 PSCAO43653 123 aa13.01□□□□□ -0.33
FOXC1-201ENST00000380874 ETDCA0A1B0GVM5 59 aa13□□□□□ -0.33
FOXC1-201ENST00000380874 SERP2Q8N6R1 65 aa13□□□□□ -0.33
FOXC1-201ENST00000380874 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13□□□□□ -0.33
FOXC1-201ENST00000380874 UBE2DNLQ8IWF7 75 aa13□□□□□ -0.33
FOXC1-201ENST00000380874 OBSCN-AS1Q96MR7 158 aa12.99□□□□□ -0.33
FOXC1-201ENST00000380874 FAM19A5Q7Z5A7 132 aaPredicted RBP12.98□□□□□ -0.33
FOXC1-201ENST00000380874 C20orf197Q8N268 126 aa12.98□□□□□ -0.33
FOXC1-201ENST00000380874 UBE2BP63146 152 aa12.97□□□□□ -0.33
FOXC1-201ENST00000380874 ATP5EP2Q5VTU8 51 aa12.97□□□□□ -0.33
FOXC1-201ENST00000380874 Q6ZRP5 223 aa12.97□□□□□ -0.33
FOXC1-201ENST00000380874 DPH3Q96FX2 82 aa12.97□□□□□ -0.33
FOXC1-201ENST00000380874 GVQW2A0A096LPI5 108 aaPredicted RBP12.97□□□□□ -0.33
FOXC1-201ENST00000380874 LOC107984640A0A0U1RRK4 108 aa12.97□□□□□ -0.33
FOXC1-201ENST00000380874 VPREB1P12018 145 aa12.97□□□□□ -0.33
FOXC1-201ENST00000380874 C3orf84H3BNL1 204 aa12.97□□□□□ -0.33
FOXC1-201ENST00000380874 M0R2N4 97 aa12.97□□□□□ -0.33
FOXC1-201ENST00000380874 PDE6GP18545 87 aa12.97□□□□□ -0.33
FOXC1-201ENST00000380874 C15orf56Q8N910 161 aa12.97□□□□□ -0.33
FOXC1-201ENST00000380874 TRAV10A0A0B4J240 114 aa12.96□□□□□ -0.33
FOXC1-201ENST00000380874 Q6ZQT0 140 aa12.96□□□□□ -0.33
FOXC1-201ENST00000380874 IGKV2-24A0A0C4DH68 120 aa12.96□□□□□ -0.34
FOXC1-201ENST00000380874 C2orf48Q96LS8 159 aa12.95□□□□□ -0.34
FOXC1-201ENST00000380874 LINC00167Q96N53 147 aa12.95□□□□□ -0.34
FOXC1-201ENST00000380874 TRRAPQ9Y4A5 3859 aa12.95□□□□□ -0.34
FOXC1-201ENST00000380874 LINC01556Q5JQF7 62 aa12.95□□□□□ -0.34
FOXC1-201ENST00000380874 Q6ZVQ6 151 aa12.95□□□□□ -0.34
FOXC1-201ENST00000380874 RMI2Q96E14 147 aa12.95□□□□□ -0.34
FOXC1-201ENST00000380874 H3BNG1 76 aa12.94□□□□□ -0.34
FOXC1-201ENST00000380874 NREPQ16612 68 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms