RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 STAB1Q9NY15 2570 aa13.49□□□□□ -0.25
EBF1-202ENST00000380654 A0A0J9YWU9 116 aa13.48□□□□□ -0.25
EBF1-202ENST00000380654 S100A7L2Q5SY68 101 aa13.48□□□□□ -0.25
EBF1-202ENST00000380654 KPRPQ5T749 579 aaPredicted RBP13.48□□□□□ -0.25
EBF1-202ENST00000380654 LINC00167Q96N53 147 aa13.48□□□□□ -0.25
EBF1-202ENST00000380654 Q6ZTC4 211 aa13.47□□□□□ -0.25
EBF1-202ENST00000380654 FAM236AA0A1B0GUQ0 79 aa13.47□□□□□ -0.25
EBF1-202ENST00000380654 FAM236BA0A1B0GV22 79 aa13.47□□□□□ -0.25
EBF1-202ENST00000380654 B5MCH6 92 aa13.47□□□□□ -0.25
EBF1-202ENST00000380654 IMUPQ9GZP8 106 aa13.45□□□□□ -0.26
EBF1-202ENST00000380654 C6orf48Q9UBA6 75 aa13.45□□□□□ -0.26
EBF1-202ENST00000380654 RPL18AQ02543 176 aaKnown RBP13.45□□□□□ -0.26
EBF1-202ENST00000380654 LINC00846Q9NV44 126 aa13.45□□□□□ -0.26
EBF1-202ENST00000380654 XAGE1AQ9HD64 81 aa13.44□□□□□ -0.26
EBF1-202ENST00000380654 A0A1B0GX51 115 aa13.42□□□□□ -0.26
EBF1-202ENST00000380654 HIGD2BQ4VC39 106 aa13.42□□□□□ -0.26
EBF1-202ENST00000380654 FLNBO75369 2602 aaKnown RBP13.41□□□□□ -0.26
EBF1-202ENST00000380654 LINC00575Q6W349 94 aa13.4□□□□□ -0.26
EBF1-202ENST00000380654 GVQW2A0A096LPI5 108 aaPredicted RBP13.39□□□□□ -0.27
EBF1-202ENST00000380654 KRTAP24-1Q3LI83 254 aa13.39□□□□□ -0.27
EBF1-202ENST00000380654 TMEM256-PLSCR3K7ERE1 68 aa13.39□□□□□ -0.27
EBF1-202ENST00000380654 IGLV6-57P01721 117 aa13.39□□□□□ -0.27
EBF1-202ENST00000380654 ESRGQ1W209 222 aa13.39□□□□□ -0.27
EBF1-202ENST00000380654 KRTAP26-1Q6PEX3 210 aa13.39□□□□□ -0.27
EBF1-202ENST00000380654 SS18L2Q9UHA2 77 aa13.39□□□□□ -0.27
EBF1-202ENST00000380654 MUC7Q8TAX7 377 aa13.38□□□□□ -0.27
EBF1-202ENST00000380654 DNAH3Q8TD57 4116 aa13.37□□□□□ -0.27
EBF1-202ENST00000380654 IGKV3D-7A0A0C4DH55 119 aa13.37□□□□□ -0.27
EBF1-202ENST00000380654 H3BNG1 76 aa13.37□□□□□ -0.27
EBF1-202ENST00000380654 MAST4O15021 2626 aa13.36□□□□□ -0.27
EBF1-202ENST00000380654 TRBV10-3A0A0K0K1G6 114 aa13.36□□□□□ -0.27
EBF1-202ENST00000380654 ZNF561-AS1K7EIQ3 104 aa13.36□□□□□ -0.27
EBF1-202ENST00000380654 CCKP06307 115 aa13.36□□□□□ -0.27
EBF1-202ENST00000380654 NOTCH1P46531 2555 aa13.35□□□□□ -0.27
EBF1-202ENST00000380654 EGFEM1PQ0D2K5 195 aa13.35□□□□□ -0.27
EBF1-202ENST00000380654 CAMK2N2Q96S95 79 aa13.35□□□□□ -0.27
EBF1-202ENST00000380654 hADV29S1A0JD25 119 aa13.34□□□□□ -0.27
EBF1-202ENST00000380654 JMJD7-PLA2G4BH0Y9G9 81 aa13.34□□□□□ -0.27
EBF1-202ENST00000380654 C15orf56Q8N910 161 aa13.33□□□□□ -0.28
EBF1-202ENST00000380654 Q6ZRU5 148 aa13.33□□□□□ -0.28
EBF1-202ENST00000380654 C3orf56Q8N813 242 aa13.31□□□□□ -0.28
EBF1-202ENST00000380654 TRAV23DV6A0A075B6W5 121 aa13.3□□□□□ -0.28
EBF1-202ENST00000380654 DEFB131BA0A096LNP1 70 aa13.3□□□□□ -0.28
EBF1-202ENST00000380654 Q6JHZ5 121 aa13.3□□□□□ -0.28
EBF1-202ENST00000380654 Q6ZQY7 126 aa13.29□□□□□ -0.28
EBF1-202ENST00000380654 A0A087WVE0 104 aa13.28□□□□□ -0.28
EBF1-202ENST00000380654 C11orf45Q8TAV5 145 aa13.28□□□□□ -0.28
EBF1-202ENST00000380654 IGKV2D-24A0A075B6R9 120 aa13.27□□□□□ -0.29
EBF1-202ENST00000380654 VPREB1P12018 145 aa13.27□□□□□ -0.29
EBF1-202ENST00000380654 C1orf43Q9BWL3 253 aa13.27□□□□□ -0.29
EBF1-202ENST00000380654 DIRC1Q969H9 104 aa13.26□□□□□ -0.29
EBF1-202ENST00000380654 ZNF73O43830 326 aaPredicted RBP13.25□□□□□ -0.29
EBF1-202ENST00000380654 LAMTOR3Q9UHA4 124 aa13.25□□□□□ -0.29
EBF1-202ENST00000380654 HIST1H4AP62805 103 aaKnown RBP13.25□□□□□ -0.29
EBF1-202ENST00000380654 LINC01556Q5JQF7 62 aa13.24□□□□□ -0.29
EBF1-202ENST00000380654 RBM3P98179 157 aaKnown RBP13.23□□□□□ -0.29
EBF1-202ENST00000380654 NDUFC2-KCTD14E9PQ53 114 aa13.23□□□□□ -0.29
EBF1-202ENST00000380654 M0R2N4 97 aa13.23□□□□□ -0.29
EBF1-202ENST00000380654 PRB2P02812 416 aaPredicted RBP13.23□□□□□ -0.29
EBF1-202ENST00000380654 Q6ZRP5 223 aa13.22□□□□□ -0.29
EBF1-202ENST00000380654 NBEAL1Q6ZS30 2694 aa13.22□□□□□ -0.29
EBF1-202ENST00000380654 Q6ZQT0 140 aa13.22□□□□□ -0.29
EBF1-202ENST00000380654 C2orf48Q96LS8 159 aa13.21□□□□□ -0.29
EBF1-202ENST00000380654 COX7BP24311 80 aa13.2□□□□□ -0.3
EBF1-202ENST00000380654 ELOF1P60002 83 aaKnown RBP13.19□□□□□ -0.3
EBF1-202ENST00000380654 C3orf22Q8N5N4 141 aa13.19□□□□□ -0.3
EBF1-202ENST00000380654 COL6A5A8TX70 2615 aa13.19□□□□□ -0.3
EBF1-202ENST00000380654 M0R378 163 aa13.18□□□□□ -0.3
EBF1-202ENST00000380654 DNAH1Q9P2D7 4330 aa13.18□□□□□ -0.3
EBF1-202ENST00000380654 BAHCC1Q9P281 2608 aa13.18□□□□□ -0.3
EBF1-202ENST00000380654 HUWE1Q7Z6Z7 4374 aaKnown RBP13.17□□□□□ -0.3
EBF1-202ENST00000380654 ATOX1O00244 68 aa13.16□□□□□ -0.3
EBF1-202ENST00000380654 UQCRQO14949 82 aa13.16□□□□□ -0.3
EBF1-202ENST00000380654 C9orf153Q5TBE3 101 aa13.16□□□□□ -0.3
EBF1-202ENST00000380654 LOC110117498A0A087WWA1 95 aa13.16□□□□□ -0.3
EBF1-202ENST00000380654 SYCNQ0VAF6 134 aa13.16□□□□□ -0.3
EBF1-202ENST00000380654 DNAH10OSP0CZ25 163 aa13.14□□□□□ -0.31
EBF1-202ENST00000380654 COX7CP15954 63 aa13.14□□□□□ -0.31
EBF1-202ENST00000380654 FAM19A1Q7Z5A9 133 aa13.14□□□□□ -0.31
EBF1-202ENST00000380654 DSCR8Q96T75 97 aa13.14□□□□□ -0.31
EBF1-202ENST00000380654 UBL5Q9BZL1 73 aa13.14□□□□□ -0.31
EBF1-202ENST00000380654 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.13□□□□□ -0.31
EBF1-202ENST00000380654 LINC00588Q9Y4M8 146 aa13.12□□□□□ -0.31
EBF1-202ENST00000380654 USP17L23D6RBM5 183 aa13.12□□□□□ -0.31
EBF1-202ENST00000380654 CASC10Q5T4H9 136 aa13.12□□□□□ -0.31
EBF1-202ENST00000380654 TRBV7-6A0A0J9YX20 115 aa13.11□□□□□ -0.31
EBF1-202ENST00000380654 SERTAD4-AS1Q5TG53 156 aa13.11□□□□□ -0.31
EBF1-202ENST00000380654 MRAPQ8TCY5 172 aa13.11□□□□□ -0.31
EBF1-202ENST00000380654 LINC00528Q8N1L1 170 aa13.11□□□□□ -0.31
EBF1-202ENST00000380654 LYSTQ99698 3801 aa13.1□□□□□ -0.31
EBF1-202ENST00000380654 ATP5EP2Q5VTU8 51 aa13.09□□□□□ -0.31
EBF1-202ENST00000380654 TRAV10A0A0B4J240 114 aa13.07□□□□□ -0.32
EBF1-202ENST00000380654 H3BQ85 93 aa13.06□□□□□ -0.32
EBF1-202ENST00000380654 Q6ZVQ6 151 aa13.06□□□□□ -0.32
EBF1-202ENST00000380654 TRBV7-4A0A0J9YYF1 115 aa13.05□□□□□ -0.32
EBF1-202ENST00000380654 NKAPP1Q8N9T2 125 aa13.05□□□□□ -0.32
EBF1-202ENST00000380654 CYSTM1Q9H1C7 97 aa13.05□□□□□ -0.32
EBF1-202ENST00000380654 F8WDY8 70 aa13.05□□□□□ -0.32
EBF1-202ENST00000380654 C7orf33Q8WU49 177 aa13.05□□□□□ -0.32
EBF1-202ENST00000380654 UPK3BQ9BT76 320 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms