RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 IGLV5-37A0A075B6J1 123 aa11.63□□□□□ -0.55
SSU72-203ENST00000378725 VPS13BQ7Z7G8 4022 aa11.63□□□□□ -0.55
SSU72-203ENST00000378725 INAFM2P0DMQ5 153 aa11.62□□□□□ -0.55
SSU72-203ENST00000378725 ANKRD39Q53RE8 183 aa11.62□□□□□ -0.55
SSU72-203ENST00000378725 MIR7-3HGQ8N6C7 128 aa11.62□□□□□ -0.55
SSU72-203ENST00000378725 A0A0J9YXY3 114 aa11.61□□□□□ -0.55
SSU72-203ENST00000378725 PRR3P79522 188 aaKnown RBP11.61□□□□□ -0.55
SSU72-203ENST00000378725 LBHQ53QV2 105 aaPredicted RBP11.61□□□□□ -0.55
SSU72-203ENST00000378725 KRTAP11-1Q8IUC1 163 aa11.6□□□□□ -0.55
SSU72-203ENST00000378725 LOC107984156A0A0G2JMH3 177 aa11.59□□□□□ -0.55
SSU72-203ENST00000378725 VPREB1P12018 145 aa11.59□□□□□ -0.55
SSU72-203ENST00000378725 RPL24P83731 157 aaKnown RBP11.59□□□□□ -0.55
SSU72-203ENST00000378725 MRPL55Q7Z7F7 128 aaKnown RBP11.59□□□□□ -0.55
SSU72-203ENST00000378725 ARL17AQ8IVW1 177 aa11.59□□□□□ -0.55
SSU72-203ENST00000378725 PSORS1C2Q9UIG4 136 aa11.59□□□□□ -0.55
SSU72-203ENST00000378725 ZNF815PA8K554 130 aa11.58□□□□□ -0.56
SSU72-203ENST00000378725 SCGB1D1O95968 90 aa11.58□□□□□ -0.56
SSU72-203ENST00000378725 Q8NDZ9 215 aa11.58□□□□□ -0.56
SSU72-203ENST00000378725 TTTY13Q9BZ97 58 aa11.58□□□□□ -0.56
SSU72-203ENST00000378725 LINC00167Q96N53 147 aa11.57□□□□□ -0.56
SSU72-203ENST00000378725 ABCA13Q86UQ4 5058 aa11.56□□□□□ -0.56
SSU72-203ENST00000378725 TIMM17BO60830 172 aa11.56□□□□□ -0.56
SSU72-203ENST00000378725 HNRNPA3P51991 378 aaKnown RBP11.56□□□□□ -0.56
SSU72-203ENST00000378725 UBE2BP63146 152 aa11.56□□□□□ -0.56
SSU72-203ENST00000378725 ADAMTSL4-AS1Q5T5F5 129 aa11.56□□□□□ -0.56
SSU72-203ENST00000378725 NKAPP1Q8N9T2 125 aa11.56□□□□□ -0.56
SSU72-203ENST00000378725 SRRM2Q9UQ35 2752 aaKnown RBP11.56□□□□□ -0.56
SSU72-203ENST00000378725 TMA7Q9Y2S6 64 aaKnown RBP11.56□□□□□ -0.56
SSU72-203ENST00000378725 DAND5Q8N907 189 aa11.55□□□□□ -0.56
SSU72-203ENST00000378725 LITAFQ99732 161 aa11.55□□□□□ -0.56
SSU72-203ENST00000378725 HSBP1L1C9JCN9 74 aa11.53□□□□□ -0.56
SSU72-203ENST00000378725 C1orf137Q5JT78 98 aa11.53□□□□□ -0.56
SSU72-203ENST00000378725 PCP2Q8IVA1 136 aa11.53□□□□□ -0.56
SSU72-203ENST00000378725 BOD1L2Q8IYS8 172 aa11.53□□□□□ -0.56
SSU72-203ENST00000378725 SRSF9Q13242 221 aaKnown RBP eCLIP11.52□□□□□ -0.57
SSU72-203ENST00000378725 JOSD1Q15040 202 aaPredicted RBP11.52□□□□□ -0.57
SSU72-203ENST00000378725 GAGE10A6NGK3 116 aa11.51□□□□□ -0.57
SSU72-203ENST00000378725 RPL37AP8A6NKH3 93 aa11.51□□□□□ -0.57
SSU72-203ENST00000378725 PCLOQ9Y6V0 5065 aa11.51□□□□□ -0.57
SSU72-203ENST00000378725 IGLV1-50A0A075B6I6 118 aa11.5□□□□□ -0.57
SSU72-203ENST00000378725 M0R378 163 aa11.49□□□□□ -0.57
SSU72-203ENST00000378725 IGLV7-43P04211 117 aa11.49□□□□□ -0.57
SSU72-203ENST00000378725 SOSTDC1Q6X4U4 206 aa11.49□□□□□ -0.57
SSU72-203ENST00000378725 EIF4EBP3O60516 100 aaPredicted RBP11.48□□□□□ -0.57
SSU72-203ENST00000378725 SPINK6Q6UWN8 80 aa11.48□□□□□ -0.57
SSU72-203ENST00000378725 SCGB1D4Q6XE38 83 aa11.48□□□□□ -0.57
SSU72-203ENST00000378725 NDUFC2O95298 119 aa11.47□□□□□ -0.57
SSU72-203ENST00000378725 LINC00308Q8TCZ7 52 aa11.47□□□□□ -0.57
SSU72-203ENST00000378725 MIEN1Q9BRT3 115 aa11.47□□□□□ -0.57
SSU72-203ENST00000378725 SPANXDQ9BXN6 97 aa11.46□□□□□ -0.57
SSU72-203ENST00000378725 SPANXCQ9NY87 97 aa11.46□□□□□ -0.57
SSU72-203ENST00000378725 IGKV2-28A0A075B6P5 120 aa11.45□□□□□ -0.58
SSU72-203ENST00000378725 TRBV10-2A0A0K0K1G8 114 aa11.45□□□□□ -0.58
SSU72-203ENST00000378725 TMEM238C9JI98 176 aa11.45□□□□□ -0.58
SSU72-203ENST00000378725 IGKV2D-28P01615 120 aa11.45□□□□□ -0.58
SSU72-203ENST00000378725 NPC2P61916 151 aa11.45□□□□□ -0.58
SSU72-203ENST00000378725 NCR3O14931 201 aa11.44□□□□□ -0.58
SSU72-203ENST00000378725 BCE1O60756 84 aa11.43□□□□□ -0.58
SSU72-203ENST00000378725 Q6ZVH6 145 aa11.43□□□□□ -0.58
SSU72-203ENST00000378725 SPANXB1Q9NS25 103 aaPredicted RBP11.43□□□□□ -0.58
SSU72-203ENST00000378725 PPDPFQ9H3Y8 114 aa11.42□□□□□ -0.58
SSU72-203ENST00000378725 COX8AP10176 69 aa11.41□□□□□ -0.58
SSU72-203ENST00000378725 PYY3Q5JQD4 70 aa11.41□□□□□ -0.58
SSU72-203ENST00000378725 PKHD1L1Q86WI1 4243 aa11.4□□□□□ -0.58
SSU72-203ENST00000378725 KRTAP29-1A8MX34 341 aaPredicted RBP11.4□□□□□ -0.58
SSU72-203ENST00000378725 ZNF861PO60384 105 aa11.4□□□□□ -0.58
SSU72-203ENST00000378725 IFITM1P13164 125 aa11.4□□□□□ -0.58
SSU72-203ENST00000378725 REG3GQ6UW15 175 aa11.4□□□□□ -0.58
SSU72-203ENST00000378725 TMEM126AQ9H061 195 aa11.4□□□□□ -0.58
SSU72-203ENST00000378725 KCNQ1DNQ9H478 68 aa11.4□□□□□ -0.58
SSU72-203ENST00000378725 DLEU1O43261 78 aa11.39□□□□□ -0.59
SSU72-203ENST00000378725 OXTP01178 125 aa11.39□□□□□ -0.59
SSU72-203ENST00000378725 SPATA45Q537H7 98 aa11.39□□□□□ -0.59
SSU72-203ENST00000378725 VAMP8Q9BV40 100 aa11.39□□□□□ -0.59
SSU72-203ENST00000378725 PAM16Q9Y3D7 125 aa11.39□□□□□ -0.59
SSU72-203ENST00000378725 TRBV10-3A0A0K0K1G6 114 aa11.38□□□□□ -0.59
SSU72-203ENST00000378725 COPS9Q8WXC6 57 aa11.38□□□□□ -0.59
SSU72-203ENST00000378725 DIRC1Q969H9 104 aa11.38□□□□□ -0.59
SSU72-203ENST00000378725 IGLV6-57P01721 117 aa11.37□□□□□ -0.59
SSU72-203ENST00000378725 KRTAP13-1Q8IUC0 172 aa11.37□□□□□ -0.59
SSU72-203ENST00000378725 MUSTN1Q8IVN3 82 aa11.37□□□□□ -0.59
SSU72-203ENST00000378725 FLG2Q5D862 2391 aaPredicted RBP11.36□□□□□ -0.59
SSU72-203ENST00000378725 PRYO14603 147 aa11.36□□□□□ -0.59
SSU72-203ENST00000378725 DDTP30046 118 aa11.36□□□□□ -0.59
SSU72-203ENST00000378725 RPL28P46779 137 aaKnown RBP11.36□□□□□ -0.59
SSU72-203ENST00000378725 H0Y9J4 135 aa11.35□□□□□ -0.59
SSU72-203ENST00000378725 SPRR1AP35321 89 aa11.35□□□□□ -0.59
SSU72-203ENST00000378725 C14orf144Q96I85 54 aa11.35□□□□□ -0.59
SSU72-203ENST00000378725 S100A7L2Q5SY68 101 aa11.34□□□□□ -0.59
SSU72-203ENST00000378725 LINC00518Q8N0U6 118 aa11.34□□□□□ -0.59
SSU72-203ENST00000378725 UBE2AP49459 152 aa11.33□□□□□ -0.6
SSU72-203ENST00000378725 MYCBP2O75592 4640 aa11.32□□□□□ -0.6
SSU72-203ENST00000378725 KRTAP4-16G5E9R7 235 aaPredicted RBP11.32□□□□□ -0.6
SSU72-203ENST00000378725 S100A12P80511 92 aa11.32□□□□□ -0.6
SSU72-203ENST00000378725 FAM19A1Q7Z5A9 133 aa11.32□□□□□ -0.6
SSU72-203ENST00000378725 LINC00337Q8N6G1 96 aa11.32□□□□□ -0.6
SSU72-203ENST00000378725 LINC01600Q96MT4 127 aa11.31□□□□□ -0.6
SSU72-203ENST00000378725 SLC25A34Q6PIV7 304 aa11.3□□□□□ -0.6
SSU72-203ENST00000378725 PRLHP81277 87 aa11.29□□□□□ -0.6
SSU72-203ENST00000378725 HIGD1BQ9P298 99 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms