RNA–Protein interactions for RNA: ENST00000378518.5

RER1-204, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-204ENST00000378518 C5orf52A6NGY3 159 aa12.45□□□□□ -0.42
RER1-204ENST00000378518 TP73-AS1Q9UF72 201 aa12.45□□□□□ -0.42
RER1-204ENST00000378518 ABCA13Q86UQ4 5058 aa12.45□□□□□ -0.42
RER1-204ENST00000378518 NKAPP1Q8N9T2 125 aa12.44□□□□□ -0.42
RER1-204ENST00000378518 RPL24P83731 157 aaKnown RBP12.43□□□□□ -0.42
RER1-204ENST00000378518 SRRM2Q9UQ35 2752 aaKnown RBP12.43□□□□□ -0.42
RER1-204ENST00000378518 MRPL55Q7Z7F7 128 aaKnown RBP12.42□□□□□ -0.42
RER1-204ENST00000378518 MIR7-3HGQ8N6C7 128 aa12.42□□□□□ -0.42
RER1-204ENST00000378518 PSORS1C2Q9UIG4 136 aa12.42□□□□□ -0.42
RER1-204ENST00000378518 IGLV5-37A0A075B6J1 123 aa12.41□□□□□ -0.42
RER1-204ENST00000378518 ATOH7Q8N100 152 aa12.41□□□□□ -0.42
RER1-204ENST00000378518 C1orf137Q5JT78 98 aa12.4□□□□□ -0.42
RER1-204ENST00000378518 PCLOQ9Y6V0 5065 aa12.38□□□□□ -0.43
RER1-204ENST00000378518 IGKV2D-26A0A0A0MRZ7 120 aa12.38□□□□□ -0.43
RER1-204ENST00000378518 A0A0J9YXY3 114 aa12.38□□□□□ -0.43
RER1-204ENST00000378518 ZNF815PA8K554 130 aa12.37□□□□□ -0.43
RER1-204ENST00000378518 VPREB1P12018 145 aa12.37□□□□□ -0.43
RER1-204ENST00000378518 HNRNPA3P51991 378 aaKnown RBP12.37□□□□□ -0.43
RER1-204ENST00000378518 HSBP1L1C9JCN9 74 aa12.36□□□□□ -0.43
RER1-204ENST00000378518 ANKRD39Q53RE8 183 aa12.36□□□□□ -0.43
RER1-204ENST00000378518 LINC00167Q96N53 147 aa12.36□□□□□ -0.43
RER1-204ENST00000378518 SCGB1D1O95968 90 aa12.35□□□□□ -0.43
RER1-204ENST00000378518 KRTAP11-1Q8IUC1 163 aa12.35□□□□□ -0.43
RER1-204ENST00000378518 MIEN1Q9BRT3 115 aa12.35□□□□□ -0.43
RER1-204ENST00000378518 GAGE10A6NGK3 116 aa12.34□□□□□ -0.43
RER1-204ENST00000378518 BOD1L2Q8IYS8 172 aa12.34□□□□□ -0.43
RER1-204ENST00000378518 DAND5Q8N907 189 aa12.34□□□□□ -0.43
RER1-204ENST00000378518 RPL37AP8A6NKH3 93 aa12.33□□□□□ -0.44
RER1-204ENST00000378518 SPINK6Q6UWN8 80 aa12.33□□□□□ -0.44
RER1-204ENST00000378518 TTTY13Q9BZ97 58 aa12.32□□□□□ -0.44
RER1-204ENST00000378518 TIMM17BO60830 172 aa12.31□□□□□ -0.44
RER1-204ENST00000378518 IGLV7-43P04211 117 aa12.31□□□□□ -0.44
RER1-204ENST00000378518 LOC107984156A0A0G2JMH3 177 aa12.3□□□□□ -0.44
RER1-204ENST00000378518 SCGB1D4Q6XE38 83 aa12.3□□□□□ -0.44
RER1-204ENST00000378518 ARL17AQ8IVW1 177 aa12.3□□□□□ -0.44
RER1-204ENST00000378518 Q8NDZ9 215 aa12.3□□□□□ -0.44
RER1-204ENST00000378518 TMA7Q9Y2S6 64 aaKnown RBP12.3□□□□□ -0.44
RER1-204ENST00000378518 PKHD1L1Q86WI1 4243 aa12.29□□□□□ -0.44
RER1-204ENST00000378518 M0R378 163 aa12.29□□□□□ -0.44
RER1-204ENST00000378518 IGKV2-28A0A075B6P5 120 aa12.28□□□□□ -0.44
RER1-204ENST00000378518 IGKV2D-28P01615 120 aa12.28□□□□□ -0.44
RER1-204ENST00000378518 FLG2Q5D862 2391 aaPredicted RBP12.27□□□□□ -0.44
RER1-204ENST00000378518 TMEM238C9JI98 176 aa12.27□□□□□ -0.45
RER1-204ENST00000378518 NCR3O14931 201 aa12.27□□□□□ -0.45
RER1-204ENST00000378518 NPC2P61916 151 aa12.27□□□□□ -0.45
RER1-204ENST00000378518 SRSF9Q13242 221 aaKnown RBP eCLIP12.27□□□□□ -0.452e-6■□□□□ 8.7
RER1-204ENST00000378518 ADAMTSL4-AS1Q5T5F5 129 aa12.27□□□□□ -0.45
RER1-204ENST00000378518 IGLV1-50A0A075B6I6 118 aa12.26□□□□□ -0.45
RER1-204ENST00000378518 PCP2Q8IVA1 136 aa12.26□□□□□ -0.45
RER1-204ENST00000378518 BCE1O60756 84 aa12.25□□□□□ -0.45
RER1-204ENST00000378518 OXTP01178 125 aa12.25□□□□□ -0.45
RER1-204ENST00000378518 LITAFQ99732 161 aa12.25□□□□□ -0.45
RER1-204ENST00000378518 NDUFC2O95298 119 aa12.24□□□□□ -0.45
RER1-204ENST00000378518 REG3GQ6UW15 175 aa12.24□□□□□ -0.45
RER1-204ENST00000378518 DIRC1Q969H9 104 aa12.24□□□□□ -0.45
RER1-204ENST00000378518 KRTAP29-1A8MX34 341 aaPredicted RBP12.23□□□□□ -0.45
RER1-204ENST00000378518 SPANXB1Q9NS25 103 aaPredicted RBP12.23□□□□□ -0.45
RER1-204ENST00000378518 TRBV10-2A0A0K0K1G8 114 aa12.22□□□□□ -0.45
RER1-204ENST00000378518 S100A12P80511 92 aa12.22□□□□□ -0.45
RER1-204ENST00000378518 SOSTDC1Q6X4U4 206 aa12.22□□□□□ -0.45
RER1-204ENST00000378518 LINC00308Q8TCZ7 52 aa12.22□□□□□ -0.45
RER1-204ENST00000378518 COPS9Q8WXC6 57 aa12.22□□□□□ -0.45
RER1-204ENST00000378518 J3QL48 77 aa12.21□□□□□ -0.45
RER1-204ENST00000378518 ZNF861PO60384 105 aa12.21□□□□□ -0.45
RER1-204ENST00000378518 RPL28P46779 137 aaKnown RBP12.21□□□□□ -0.45
RER1-204ENST00000378518 SPANXDQ9BXN6 97 aa12.21□□□□□ -0.45
RER1-204ENST00000378518 TMEM126AQ9H061 195 aa12.21□□□□□ -0.45
RER1-204ENST00000378518 SPANXCQ9NY87 97 aa12.21□□□□□ -0.45
RER1-204ENST00000378518 UBE2AP49459 152 aa12.2□□□□□ -0.46
RER1-204ENST00000378518 JOSD1Q15040 202 aaPredicted RBP12.2□□□□□ -0.46
RER1-204ENST00000378518 H0Y9J4 135 aa12.19□□□□□ -0.46
RER1-204ENST00000378518 PRYO14603 147 aa12.19□□□□□ -0.46
RER1-204ENST00000378518 Q6ZVH6 145 aa12.19□□□□□ -0.46
RER1-204ENST00000378518 S100A7L2Q5SY68 101 aa12.18□□□□□ -0.46
RER1-204ENST00000378518 FAM19A1Q7Z5A9 133 aa12.18□□□□□ -0.46
RER1-204ENST00000378518 MYCBP2O75592 4640 aa12.17□□□□□ -0.46
RER1-204ENST00000378518 EIF4EBP3O60516 100 aaPredicted RBP12.17□□□□□ -0.46
RER1-204ENST00000378518 IFITM1P13164 125 aa12.17□□□□□ -0.46
RER1-204ENST00000378518 DDTP30046 118 aa12.17□□□□□ -0.46
RER1-204ENST00000378518 TRBV10-3A0A0K0K1G6 114 aa12.16□□□□□ -0.46
RER1-204ENST00000378518 VAMP8Q9BV40 100 aa12.16□□□□□ -0.46
RER1-204ENST00000378518 KCNQ1DNQ9H478 68 aa12.15□□□□□ -0.46
RER1-204ENST00000378518 PAM16Q9Y3D7 125 aa12.14□□□□□ -0.47
RER1-204ENST00000378518 COX8AP10176 69 aa12.13□□□□□ -0.47
RER1-204ENST00000378518 SPATA45Q537H7 98 aa12.13□□□□□ -0.47
RER1-204ENST00000378518 PPDPFQ9H3Y8 114 aa12.13□□□□□ -0.47
RER1-204ENST00000378518 CBY1Q9Y3M2 126 aa12.13□□□□□ -0.47
RER1-204ENST00000378518 PRLHP81277 87 aa12.12□□□□□ -0.47
RER1-204ENST00000378518 LINC00518Q8N0U6 118 aa12.12□□□□□ -0.47
RER1-204ENST00000378518 LINC01600Q96MT4 127 aa12.12□□□□□ -0.47
RER1-204ENST00000378518 KRTAP13-1Q8IUC0 172 aa12.11□□□□□ -0.47
RER1-204ENST00000378518 FAT3Q8TDW7 4589 aa12.1□□□□□ -0.47
RER1-204ENST00000378518 ETDCA0A1B0GVM5 59 aa12.1□□□□□ -0.47
RER1-204ENST00000378518 IGLV6-57P01721 117 aa12.1□□□□□ -0.47
RER1-204ENST00000378518 MUSTN1Q8IVN3 82 aa12.1□□□□□ -0.47
RER1-204ENST00000378518 LINC00337Q8N6G1 96 aa12.1□□□□□ -0.47
RER1-204ENST00000378518 OR13C6PQ8NH95 151 aa12.1□□□□□ -0.47
RER1-204ENST00000378518 DLEU1O43261 78 aa12.09□□□□□ -0.47
RER1-204ENST00000378518 SPRR1AP35321 89 aa12.09□□□□□ -0.47
RER1-204ENST00000378518 LRP1Q07954 4544 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms