RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 KRTAP7-1Q8IUC3 87 aa13.5□□□□□ -0.25
CBWD3-202ENST00000377342 LINC00474Q9P2X8 69 aa13.5□□□□□ -0.25
CBWD3-202ENST00000377342 Q8NDZ9 215 aa13.49□□□□□ -0.25
CBWD3-202ENST00000377342 NPC2P61916 151 aa13.48□□□□□ -0.25
CBWD3-202ENST00000377342 SPANXB1Q9NS25 103 aaPredicted RBP13.48□□□□□ -0.25
CBWD3-202ENST00000377342 UQCR10Q9UDW1 63 aa13.48□□□□□ -0.25
CBWD3-202ENST00000377342 HIGD1BQ9P298 99 aa13.47□□□□□ -0.25
CBWD3-202ENST00000377342 A0A087WYN8 130 aa13.47□□□□□ -0.25
CBWD3-202ENST00000377342 LOC107984156A0A0G2JMH3 177 aa13.47□□□□□ -0.25
CBWD3-202ENST00000377342 A0A1W2PNN7 141 aa13.47□□□□□ -0.25
CBWD3-202ENST00000377342 HAMPP81172 84 aa13.47□□□□□ -0.25
CBWD3-202ENST00000377342 SERTAD4-AS1Q5TG53 156 aa13.47□□□□□ -0.25
CBWD3-202ENST00000377342 ARL17AQ8IVW1 177 aa13.47□□□□□ -0.25
CBWD3-202ENST00000377342 LINC00308Q8TCZ7 52 aa13.46□□□□□ -0.26
CBWD3-202ENST00000377342 SCXQ7RTU7 201 aa13.45□□□□□ -0.26
CBWD3-202ENST00000377342 EPM2AB3EWF7 344 aa13.44□□□□□ -0.26
CBWD3-202ENST00000377342 FAM19A5Q7Z5A7 132 aaPredicted RBP13.44□□□□□ -0.26
CBWD3-202ENST00000377342 CIRBP-AS1Q8TBR5 109 aa13.44□□□□□ -0.26
CBWD3-202ENST00000377342 PLAC8Q9NZF1 115 aa13.44□□□□□ -0.26
CBWD3-202ENST00000377342 VPREB1P12018 145 aa13.43□□□□□ -0.26
CBWD3-202ENST00000377342 Q6ZVH6 145 aa13.43□□□□□ -0.26
CBWD3-202ENST00000377342 PLA2G2DQ9UNK4 145 aa13.43□□□□□ -0.26
CBWD3-202ENST00000377342 MIEN1Q9BRT3 115 aa13.42□□□□□ -0.26
CBWD3-202ENST00000377342 XGP55808 180 aa13.4□□□□□ -0.26
CBWD3-202ENST00000377342 SRSF9Q13242 221 aaKnown RBP eCLIP13.4□□□□□ -0.26
CBWD3-202ENST00000377342 DPH3Q96FX2 82 aa13.4□□□□□ -0.26
CBWD3-202ENST00000377342 IGLV5-37A0A075B6J1 123 aa13.4□□□□□ -0.26
CBWD3-202ENST00000377342 IFITM1P13164 125 aa13.4□□□□□ -0.26
CBWD3-202ENST00000377342 MUSTN1Q8IVN3 82 aa13.4□□□□□ -0.26
CBWD3-202ENST00000377342 HIST1H4GQ99525 98 aa13.39□□□□□ -0.27
CBWD3-202ENST00000377342 PPDPFQ9H3Y8 114 aa13.39□□□□□ -0.27
CBWD3-202ENST00000377342 TSTD3H0UI37 97 aa13.37□□□□□ -0.27
CBWD3-202ENST00000377342 HNRNPA3P51991 378 aaKnown RBP13.37□□□□□ -0.27
CBWD3-202ENST00000377342 M0QXV9 152 aa13.37□□□□□ -0.27
CBWD3-202ENST00000377342 PRR3P79522 188 aaKnown RBP13.37□□□□□ -0.27
CBWD3-202ENST00000377342 HSPG2P98160 4391 aa13.36□□□□□ -0.27
CBWD3-202ENST00000377342 NDUFC2O95298 119 aa13.35□□□□□ -0.27
CBWD3-202ENST00000377342 RPL24P83731 157 aaKnown RBP13.35□□□□□ -0.27
CBWD3-202ENST00000377342 C22orf24Q9Y442 160 aa13.35□□□□□ -0.27
CBWD3-202ENST00000377342 NCR3O14931 201 aa13.34□□□□□ -0.27
CBWD3-202ENST00000377342 PHF5AQ7RTV0 110 aaKnown RBP13.34□□□□□ -0.27
CBWD3-202ENST00000377342 TAL2Q16559 108 aa13.34□□□□□ -0.27
CBWD3-202ENST00000377342 COPS9Q8WXC6 57 aa13.34□□□□□ -0.27
CBWD3-202ENST00000377342 IGKV2-28A0A075B6P5 120 aa13.33□□□□□ -0.28
CBWD3-202ENST00000377342 CDK2AP2O75956 126 aa13.33□□□□□ -0.28
CBWD3-202ENST00000377342 IGKV2D-28P01615 120 aa13.33□□□□□ -0.28
CBWD3-202ENST00000377342 NKAPP1Q8N9T2 125 aa13.33□□□□□ -0.28
CBWD3-202ENST00000377342 KIAA1109Q2LD37 5005 aa13.32□□□□□ -0.28
CBWD3-202ENST00000377342 HSD52Q0P140 79 aa13.32□□□□□ -0.28
CBWD3-202ENST00000377342 MRPL55Q7Z7F7 128 aaKnown RBP13.32□□□□□ -0.28
CBWD3-202ENST00000377342 C7orf33Q8WU49 177 aa13.32□□□□□ -0.28
CBWD3-202ENST00000377342 A4D1N5 150 aa13.31□□□□□ -0.28
CBWD3-202ENST00000377342 CEND1Q8N111 149 aa13.31□□□□□ -0.28
CBWD3-202ENST00000377342 RYR1P21817 5038 aa13.3□□□□□ -0.28
CBWD3-202ENST00000377342 BIRC6Q9NR09 4857 aa13.3□□□□□ -0.28
CBWD3-202ENST00000377342 KRTAP11-1Q8IUC1 163 aa13.3□□□□□ -0.28
CBWD3-202ENST00000377342 GAGE10A6NGK3 116 aa13.29□□□□□ -0.28
CBWD3-202ENST00000377342 TRBV10-2A0A0K0K1G8 114 aa13.28□□□□□ -0.28
CBWD3-202ENST00000377342 FXYD2P54710 66 aa13.28□□□□□ -0.28
CBWD3-202ENST00000377342 LINC00167Q96N53 147 aa13.28□□□□□ -0.28
CBWD3-202ENST00000377342 M0R378 163 aa13.28□□□□□ -0.28
CBWD3-202ENST00000377342 LINC00337Q8N6G1 96 aa13.28□□□□□ -0.28
CBWD3-202ENST00000377342 CTAG1AP78358 180 aa13.27□□□□□ -0.29
CBWD3-202ENST00000377342 DDTP30046 118 aa13.26□□□□□ -0.29
CBWD3-202ENST00000377342 RPL37AP8A6NKH3 93 aa13.24□□□□□ -0.29
CBWD3-202ENST00000377342 LBHQ53QV2 105 aaPredicted RBP13.24□□□□□ -0.29
CBWD3-202ENST00000377342 FAT1Q14517 4588 aa13.24□□□□□ -0.29
CBWD3-202ENST00000377342 TRBV10-3A0A0K0K1G6 114 aa13.24□□□□□ -0.29
CBWD3-202ENST00000377342 IGLV1-50A0A075B6I6 118 aa13.23□□□□□ -0.29
CBWD3-202ENST00000377342 SMR3BP02814 79 aaPredicted RBP13.23□□□□□ -0.29
CBWD3-202ENST00000377342 IGLV6-57P01721 117 aa13.22□□□□□ -0.29
CBWD3-202ENST00000377342 UBE2BP63146 152 aa13.21□□□□□ -0.29
CBWD3-202ENST00000377342 VPS13BQ7Z7G8 4022 aa13.21□□□□□ -0.3
CBWD3-202ENST00000377342 CFC1BP0CG36 223 aa13.2□□□□□ -0.3
CBWD3-202ENST00000377342 CFC1P0CG37 223 aa13.2□□□□□ -0.3
CBWD3-202ENST00000377342 BVES-AS1Q5T3Y7 98 aa13.2□□□□□ -0.3
CBWD3-202ENST00000377342 LINC00528Q8N1L1 170 aa13.2□□□□□ -0.3
CBWD3-202ENST00000377342 KRTAP17-1Q9BYP8 105 aa13.2□□□□□ -0.3
CBWD3-202ENST00000377342 TMEM238LA0A1B0GVL6 79 aa13.18□□□□□ -0.3
CBWD3-202ENST00000377342 A6NJY4 79 aa13.18□□□□□ -0.3
CBWD3-202ENST00000377342 HINT1P49773 126 aaPredicted RBP13.18□□□□□ -0.3
CBWD3-202ENST00000377342 S100A7L2Q5SY68 101 aa13.18□□□□□ -0.3
CBWD3-202ENST00000377342 A0A0B4J2C4 111 aa13.18□□□□□ -0.3
CBWD3-202ENST00000377342 OR13C6PQ8NH95 151 aa13.18□□□□□ -0.3
CBWD3-202ENST00000377342 PSORS1C2Q9UIG4 136 aa13.18□□□□□ -0.3
CBWD3-202ENST00000377342 TRAV13-2A0A0B4J235 113 aa13.16□□□□□ -0.3
CBWD3-202ENST00000377342 TMEM126AQ9H061 195 aa13.16□□□□□ -0.3
CBWD3-202ENST00000377342 KCNQ1DNQ9H478 68 aa13.16□□□□□ -0.3
CBWD3-202ENST00000377342 A6NDN8 102 aa13.15□□□□□ -0.3
CBWD3-202ENST00000377342 NHP2Q9NX24 153 aaKnown RBP13.15□□□□□ -0.3
CBWD3-202ENST00000377342 K7ERJ3 54 aa13.15□□□□□ -0.31
CBWD3-202ENST00000377342 M0R143 59 aa13.15□□□□□ -0.31
CBWD3-202ENST00000377342 A0A1B0GWB2 263 aa13.14□□□□□ -0.31
CBWD3-202ENST00000377342 PRYO14603 147 aa13.14□□□□□ -0.31
CBWD3-202ENST00000377342 TRAV23DV6A0A075B6W5 121 aa13.13□□□□□ -0.31
CBWD3-202ENST00000377342 RPL13AP40429 203 aaKnown RBP13.13□□□□□ -0.31
CBWD3-202ENST00000377342 SPRR1AP35321 89 aa13.12□□□□□ -0.31
CBWD3-202ENST00000377342 KRTAP10-4P60372 401 aaPredicted RBP13.12□□□□□ -0.31
CBWD3-202ENST00000377342 REG3GQ6UW15 175 aa13.12□□□□□ -0.31
CBWD3-202ENST00000377342 RAB37Q96AX2 223 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms