RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 C11orf72Q8NBR9 251 aa8.51□□□□□ -1.05
C9orf3-203ENST00000375315 LINC00167Q96N53 147 aa8.5□□□□□ -1.05
C9orf3-203ENST00000375315 LINC00482Q8N8I6 264 aa8.5□□□□□ -1.05
C9orf3-203ENST00000375315 CDC42SE2Q9NRR3 84 aa8.49□□□□□ -1.05
C9orf3-203ENST00000375315 IBA57-AS1B1ANH7 110 aa8.49□□□□□ -1.05
C9orf3-203ENST00000375315 MGAM2Q2M2H8 2515 aa8.48□□□□□ -1.05
C9orf3-203ENST00000375315 TRBV6-4A0A1B0GX49 114 aa8.48□□□□□ -1.05
C9orf3-203ENST00000375315 TRAV10A0A0B4J240 114 aa8.48□□□□□ -1.05
C9orf3-203ENST00000375315 Q8N814 137 aa8.48□□□□□ -1.05
C9orf3-203ENST00000375315 HAMPP81172 84 aa8.47□□□□□ -1.05
C9orf3-203ENST00000375315 LINC01547P58512 204 aaPredicted RBP8.47□□□□□ -1.05
C9orf3-203ENST00000375315 KRTAP24-1Q3LI83 254 aa8.47□□□□□ -1.05
C9orf3-203ENST00000375315 K7EQD1 137 aa8.46□□□□□ -1.06
C9orf3-203ENST00000375315 MIFP14174 115 aa8.46□□□□□ -1.06
C9orf3-203ENST00000375315 Q6ZTI0 123 aa8.45□□□□□ -1.06
C9orf3-203ENST00000375315 UBE2L6O14933 153 aa8.45□□□□□ -1.06
C9orf3-203ENST00000375315 NBEAL1Q6ZS30 2694 aa8.45□□□□□ -1.06
C9orf3-203ENST00000375315 MPLKIPQ8TAP9 179 aa8.45□□□□□ -1.06
C9orf3-203ENST00000375315 OXLD1Q5BKU9 147 aa8.44□□□□□ -1.06
C9orf3-203ENST00000375315 IGLV1-51P01701 117 aa8.43□□□□□ -1.06
C9orf3-203ENST00000375315 CXCL6P80162 114 aa8.43□□□□□ -1.06
C9orf3-203ENST00000375315 Q6ZQT0 140 aa8.43□□□□□ -1.06
C9orf3-203ENST00000375315 NTM-AS1Q6ZSK4 140 aa8.43□□□□□ -1.06
C9orf3-203ENST00000375315 Q6ZVQ6 151 aa8.43□□□□□ -1.06
C9orf3-203ENST00000375315 TRBV7-4A0A0J9YYF1 115 aa8.42□□□□□ -1.06
C9orf3-203ENST00000375315 Q8N3U1 123 aa8.42□□□□□ -1.06
C9orf3-203ENST00000375315 LOC110117498A0A087WWA1 95 aa8.41□□□□□ -1.06
C9orf3-203ENST00000375315 TRBV10-1A0A0K0K1A3 114 aa8.41□□□□□ -1.06
C9orf3-203ENST00000375315 DEFB4AO15263 64 aa8.41□□□□□ -1.06
C9orf3-203ENST00000375315 TM2D3Q9BRN9 247 aa8.41□□□□□ -1.06
C9orf3-203ENST00000375315 PRB2P02812 416 aaPredicted RBP8.4□□□□□ -1.06
C9orf3-203ENST00000375315 INSP01308 110 aa8.4□□□□□ -1.07
C9orf3-203ENST00000375315 TMEM254Q8TBM7 123 aa8.4□□□□□ -1.07
C9orf3-203ENST00000375315 LAMTOR3Q9UHA4 124 aa8.4□□□□□ -1.07
C9orf3-203ENST00000375315 IGKV3OR2-268A0A0C4DH90 116 aa8.39□□□□□ -1.07
C9orf3-203ENST00000375315 TRGV1A0A0A0MS02 117 aa8.39□□□□□ -1.07
C9orf3-203ENST00000375315 ZNF561-AS1K7EIQ3 104 aa8.39□□□□□ -1.07
C9orf3-203ENST00000375315 NREPQ16612 68 aa8.39□□□□□ -1.07
C9orf3-203ENST00000375315 ESRGQ1W209 222 aa8.39□□□□□ -1.07
C9orf3-203ENST00000375315 FAM229BQ4G0N7 80 aa8.38□□□□□ -1.07
C9orf3-203ENST00000375315 C11orf68Q9H3H3 251 aaKnown RBP8.38□□□□□ -1.07
C9orf3-203ENST00000375315 ERC2-IT1O76042 136 aa8.38□□□□□ -1.07
C9orf3-203ENST00000375315 PDE6GP18545 87 aa8.38□□□□□ -1.07
C9orf3-203ENST00000375315 PMAIP1Q13794 54 aa8.38□□□□□ -1.07
C9orf3-203ENST00000375315 C1orf158Q8N1D5 194 aa8.38□□□□□ -1.07
C9orf3-203ENST00000375315 A8MTW9 85 aa8.38□□□□□ -1.07
C9orf3-203ENST00000375315 PLAC8L1A1L4L8 177 aa8.37□□□□□ -1.07
C9orf3-203ENST00000375315 C6orf226Q5I0X4 101 aa8.37□□□□□ -1.07
C9orf3-203ENST00000375315 NOP10Q9NPE3 64 aaKnown RBP8.37□□□□□ -1.07
C9orf3-203ENST00000375315 IGHV3OR16-9A0A0B4J2B5 98 aa8.36□□□□□ -1.07
C9orf3-203ENST00000375315 NANOS2P60321 138 aaKnown RBP8.36□□□□□ -1.07
C9orf3-203ENST00000375315 C6orf223Q8N319 242 aa8.36□□□□□ -1.07
C9orf3-203ENST00000375315 A0A087WZ39 114 aa8.36□□□□□ -1.07
C9orf3-203ENST00000375315 FUSP35637 526 aaKnown RBP eCLIP8.36□□□□□ -1.07
C9orf3-203ENST00000375315 DEFB135Q30KP9 77 aa8.36□□□□□ -1.07
C9orf3-203ENST00000375315 C19orf73Q9NVV2 129 aa8.36□□□□□ -1.07
C9orf3-203ENST00000375315 DEFB130BP0DP73 79 aa8.35□□□□□ -1.07
C9orf3-203ENST00000375315 DEFB130AP0DP74 79 aa8.35□□□□□ -1.07
C9orf3-203ENST00000375315 C9orf66Q5T8R8 295 aa8.35□□□□□ -1.07
C9orf3-203ENST00000375315 PRR15Q8IV56 129 aa8.35□□□□□ -1.07
C9orf3-203ENST00000375315 M0R2N4 97 aa8.34□□□□□ -1.07
C9orf3-203ENST00000375315 BPY2O14599 106 aa8.34□□□□□ -1.07
C9orf3-203ENST00000375315 PRYO14603 147 aa8.34□□□□□ -1.07
C9orf3-203ENST00000375315 GIG44P09565 113 aaPredicted RBP8.34□□□□□ -1.07
C9orf3-203ENST00000375315 C6orf99Q4VX62 202 aa8.34□□□□□ -1.08
C9orf3-203ENST00000375315 LINC00575Q6W349 94 aa8.34□□□□□ -1.08
C9orf3-203ENST00000375315 IL17DQ8TAD2 202 aa8.33□□□□□ -1.08
C9orf3-203ENST00000375315 TRGV2A0A075B6R0 118 aa8.33□□□□□ -1.08
C9orf3-203ENST00000375315 PRR3P79522 188 aaKnown RBP8.32□□□□□ -1.08
C9orf3-203ENST00000375315 H3BQ85 93 aa8.32□□□□□ -1.08
C9orf3-203ENST00000375315 SCXQ7RTU7 201 aa8.32□□□□□ -1.08
C9orf3-203ENST00000375315 Q6ZRU5 148 aa8.31□□□□□ -1.08
C9orf3-203ENST00000375315 IGLV4-60A0A075B6I1 120 aa8.29□□□□□ -1.08
C9orf3-203ENST00000375315 MUC7Q8TAX7 377 aa8.29□□□□□ -1.08
C9orf3-203ENST00000375315 HTN3P15516 51 aa8.29□□□□□ -1.08
C9orf3-203ENST00000375315 Q6ZTC4 211 aa8.28□□□□□ -1.08
C9orf3-203ENST00000375315 Q8IZM0 81 aa8.28□□□□□ -1.08
C9orf3-203ENST00000375315 A0A096LPF7 62 aa8.28□□□□□ -1.08
C9orf3-203ENST00000375315 RETNQ9HD89 108 aa8.28□□□□□ -1.08
C9orf3-203ENST00000375315 TENM3Q9P273 2699 aa8.28□□□□□ -1.08
C9orf3-203ENST00000375315 IGHV4-30-4P0DP06 118 aa8.27□□□□□ -1.08
C9orf3-203ENST00000375315 LOC100131303A0A0U1RQF7 123 aa8.27□□□□□ -1.09
C9orf3-203ENST00000375315 CMC4P56277 68 aaPredicted RBP8.27□□□□□ -1.09
C9orf3-203ENST00000375315 KRTAP10-11P60412 298 aa8.26□□□□□ -1.09
C9orf3-203ENST00000375315 DAD1P61803 113 aa8.26□□□□□ -1.09
C9orf3-203ENST00000375315 LINC00959A0A1B0GUT2 108 aa8.26□□□□□ -1.09
C9orf3-203ENST00000375315 COX17Q14061 63 aa8.25□□□□□ -1.09
C9orf3-203ENST00000375315 Q6ZQY7 126 aa8.25□□□□□ -1.09
C9orf3-203ENST00000375315 MDFIQ99750 246 aa8.25□□□□□ -1.09
C9orf3-203ENST00000375315 TRGV4A0A0C4DH28 118 aa8.25□□□□□ -1.09
C9orf3-203ENST00000375315 CSNK1G2-AS1Q8NCQ2 148 aa8.25□□□□□ -1.09
C9orf3-203ENST00000375315 TRBV6-8A0A0A6YYG3 113 aa8.24□□□□□ -1.09
C9orf3-203ENST00000375315 OCR1Q9BZK8 76 aa8.24□□□□□ -1.09
C9orf3-203ENST00000375315 CD164Q04900 197 aa8.24□□□□□ -1.09
C9orf3-203ENST00000375315 Q1T7F1 81 aa8.24□□□□□ -1.09
C9orf3-203ENST00000375315 hDV103S1A0JD37 113 aa8.23□□□□□ -1.09
C9orf3-203ENST00000375315 HIGD2AQ9BW72 106 aa8.22□□□□□ -1.09
C9orf3-203ENST00000375315 CD164L2Q6UWJ8 174 aa8.22□□□□□ -1.09
C9orf3-203ENST00000375315 C16orf74Q96GX8 76 aa8.21□□□□□ -1.09
C9orf3-203ENST00000375315 X6R8D5 127 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms