RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 CCL18P55774 89 aa12.5□□□□□ -0.41
RXRB-202ENST00000374685 BAALC-AS2P0C853 105 aa12.49□□□□□ -0.41
RXRB-202ENST00000374685 LINC00337Q8N6G1 96 aa12.49□□□□□ -0.41
RXRB-202ENST00000374685 COPS9Q8WXC6 57 aa12.49□□□□□ -0.41
RXRB-202ENST00000374685 CRPP02741 224 aa12.48□□□□□ -0.41
RXRB-202ENST00000374685 HRCT1Q6UXD1 115 aa12.48□□□□□ -0.41
RXRB-202ENST00000374685 DSCR8Q96T75 97 aa12.48□□□□□ -0.41
RXRB-202ENST00000374685 A0A0J9YWU9 116 aa12.48□□□□□ -0.41
RXRB-202ENST00000374685 NANOS2P60321 138 aaKnown RBP12.47□□□□□ -0.41
RXRB-202ENST00000374685 CMYA5Q8N3K9 4069 aa12.47□□□□□ -0.41
RXRB-202ENST00000374685 PRR3P79522 188 aaKnown RBP12.47□□□□□ -0.41
RXRB-202ENST00000374685 KPRPQ5T749 579 aaPredicted RBP12.47□□□□□ -0.41
RXRB-202ENST00000374685 CD164L2Q6UWJ8 174 aa12.47□□□□□ -0.41
RXRB-202ENST00000374685 C6orf223Q8N319 242 aa12.47□□□□□ -0.41
RXRB-202ENST00000374685 LELP1Q5T871 98 aa12.46□□□□□ -0.41
RXRB-202ENST00000374685 IGKV2-28A0A075B6P5 120 aa12.46□□□□□ -0.42
RXRB-202ENST00000374685 IGKV2D-28P01615 120 aa12.46□□□□□ -0.42
RXRB-202ENST00000374685 IBA57-AS1B1ANH7 110 aa12.45□□□□□ -0.42
RXRB-202ENST00000374685 LYPD5Q6UWN5 251 aa12.45□□□□□ -0.42
RXRB-202ENST00000374685 WFDC10BQ8IUB3 73 aa12.45□□□□□ -0.42
RXRB-202ENST00000374685 Q6JHZ5 121 aa12.44□□□□□ -0.42
RXRB-202ENST00000374685 Q8IZM0 81 aa12.43□□□□□ -0.42
RXRB-202ENST00000374685 FAM218AQ96MZ4 157 aa12.42□□□□□ -0.42
RXRB-202ENST00000374685 Q9HAA7 133 aa12.42□□□□□ -0.42
RXRB-202ENST00000374685 TRAV13-2A0A0B4J235 113 aa12.4□□□□□ -0.42
RXRB-202ENST00000374685 C10orf25Q5T742 122 aa12.4□□□□□ -0.42
RXRB-202ENST00000374685 EGFEM1PQ0D2K5 195 aa12.4□□□□□ -0.42
RXRB-202ENST00000374685 UNQ6190/PRO20217Q6UXQ8 127 aa12.4□□□□□ -0.42
RXRB-202ENST00000374685 SPAG11BQ08648 103 aa12.39□□□□□ -0.43
RXRB-202ENST00000374685 KIAA0087Q14695 138 aa12.39□□□□□ -0.43
RXRB-202ENST00000374685 ENHOQ6UWT2 76 aa12.39□□□□□ -0.43
RXRB-202ENST00000374685 SMIM11BQ8TCY0 68 aa12.39□□□□□ -0.43
RXRB-202ENST00000374685 NDUFC2-KCTD14E9PQ53 114 aa12.38□□□□□ -0.43
RXRB-202ENST00000374685 USP17L23D6RBM5 183 aa12.38□□□□□ -0.43
RXRB-202ENST00000374685 LINC01561Q8N1V8 128 aa12.38□□□□□ -0.43
RXRB-202ENST00000374685 C11orf45Q8TAV5 145 aa12.38□□□□□ -0.43
RXRB-202ENST00000374685 DEFB131BA0A096LNP1 70 aa12.38□□□□□ -0.43
RXRB-202ENST00000374685 IGKV3D-7A0A0C4DH55 119 aa12.37□□□□□ -0.43
RXRB-202ENST00000374685 DNAL4O96015 105 aa12.36□□□□□ -0.43
RXRB-202ENST00000374685 HIGD2BQ4VC39 106 aa12.36□□□□□ -0.43
RXRB-202ENST00000374685 ESRGQ1W209 222 aa12.35□□□□□ -0.43
RXRB-202ENST00000374685 NCR3O14931 201 aa12.34□□□□□ -0.43
RXRB-202ENST00000374685 A0A087WVE0 104 aa12.34□□□□□ -0.43
RXRB-202ENST00000374685 NDUFC2O95298 119 aa12.34□□□□□ -0.43
RXRB-202ENST00000374685 PRO0628Q9UI54 55 aa12.34□□□□□ -0.43
RXRB-202ENST00000374685 A0A087WYN8 130 aa12.33□□□□□ -0.44
RXRB-202ENST00000374685 LINC00846Q9NV44 126 aa12.33□□□□□ -0.44
RXRB-202ENST00000374685 OBSCN-AS1Q96MR7 158 aa12.33□□□□□ -0.44
RXRB-202ENST00000374685 STAB2Q8WWQ8 2551 aa12.32□□□□□ -0.44
RXRB-202ENST00000374685 EPM2AB3EWF7 344 aa12.32□□□□□ -0.44
RXRB-202ENST00000374685 PRR34Q9NV39 138 aa12.31□□□□□ -0.44
RXRB-202ENST00000374685 RPL28P46779 137 aaKnown RBP12.31□□□□□ -0.44
RXRB-202ENST00000374685 SLPIP03973 132 aa12.3□□□□□ -0.44
RXRB-202ENST00000374685 Q8NDZ9 215 aa12.3□□□□□ -0.44
RXRB-202ENST00000374685 XAGE1AQ9HD64 81 aa12.3□□□□□ -0.44
RXRB-202ENST00000374685 C14orf132Q9NPU4 83 aa12.29□□□□□ -0.44
RXRB-202ENST00000374685 LECT2O14960 151 aa12.29□□□□□ -0.44
RXRB-202ENST00000374685 IGKV2D-24A0A075B6R9 120 aa12.27□□□□□ -0.44
RXRB-202ENST00000374685 C9orf129Q5T035 196 aaKnown RBP12.27□□□□□ -0.44
RXRB-202ENST00000374685 F8WDY8 70 aa12.27□□□□□ -0.45
RXRB-202ENST00000374685 ZNF561-AS1K7EIQ3 104 aa12.26□□□□□ -0.45
RXRB-202ENST00000374685 LINC00336Q6ZUF6 198 aa12.25□□□□□ -0.45
RXRB-202ENST00000374685 K7EIL1 84 aa12.24□□□□□ -0.45
RXRB-202ENST00000374685 S100A7L2Q5SY68 101 aa12.24□□□□□ -0.45
RXRB-202ENST00000374685 FAM236DA0A1B0GTK5 79 aa12.24□□□□□ -0.45
RXRB-202ENST00000374685 FAM236CP0DP71 79 aa12.24□□□□□ -0.45
RXRB-202ENST00000374685 SERP1Q9Y6X1 66 aa12.24□□□□□ -0.45
RXRB-202ENST00000374685 CAMK2N2Q96S95 79 aa12.24□□□□□ -0.45
RXRB-202ENST00000374685 C6orf48Q9UBA6 75 aa12.23□□□□□ -0.45
RXRB-202ENST00000374685 GHRHP01286 108 aa12.23□□□□□ -0.45
RXRB-202ENST00000374685 COX17Q14061 63 aa12.23□□□□□ -0.45
RXRB-202ENST00000374685 C1orf43Q9BWL3 253 aa12.22□□□□□ -0.45
RXRB-202ENST00000374685 DNAH3Q8TD57 4116 aa12.22□□□□□ -0.45
RXRB-202ENST00000374685 H3BNG1 76 aa12.21□□□□□ -0.46
RXRB-202ENST00000374685 COL7A1Q02388 2944 aa12.2□□□□□ -0.46
RXRB-202ENST00000374685 ATP5EP2Q5VTU8 51 aa12.2□□□□□ -0.46
RXRB-202ENST00000374685 HUWE1Q7Z6Z7 4374 aaKnown RBP12.2□□□□□ -0.46
RXRB-202ENST00000374685 TENM2Q9NT68 2774 aa12.2□□□□□ -0.46
RXRB-202ENST00000374685 C6orf99Q4VX62 202 aa12.19□□□□□ -0.46
RXRB-202ENST00000374685 H0YGX0 51 aa12.18□□□□□ -0.46
RXRB-202ENST00000374685 Q6ZRU5 148 aa12.18□□□□□ -0.46
RXRB-202ENST00000374685 C20orf197Q8N268 126 aa12.17□□□□□ -0.46
RXRB-202ENST00000374685 CCKP06307 115 aa12.16□□□□□ -0.46
RXRB-202ENST00000374685 C15orf56Q8N910 161 aa12.15□□□□□ -0.46
RXRB-202ENST00000374685 H7BZZ5 65 aa12.15□□□□□ -0.46
RXRB-202ENST00000374685 TRAV10A0A0B4J240 114 aa12.15□□□□□ -0.47
RXRB-202ENST00000374685 TRAV23DV6A0A075B6W5 121 aa12.14□□□□□ -0.47
RXRB-202ENST00000374685 KRTAP26-1Q6PEX3 210 aa12.14□□□□□ -0.47
RXRB-202ENST00000374685 MDFIQ99750 246 aa12.14□□□□□ -0.47
RXRB-202ENST00000374685 LINC00588Q9Y4M8 146 aa12.14□□□□□ -0.47
RXRB-202ENST00000374685 LINC01556Q5JQF7 62 aa12.14□□□□□ -0.47
RXRB-202ENST00000374685 LYSTQ99698 3801 aa12.13□□□□□ -0.47
RXRB-202ENST00000374685 TRBV10-3A0A0K0K1G6 114 aa12.13□□□□□ -0.47
RXRB-202ENST00000374685 SMIM26A0A096LP01 95 aa12.12□□□□□ -0.47
RXRB-202ENST00000374685 BCE1O60756 84 aa12.12□□□□□ -0.47
RXRB-202ENST00000374685 TM2D3Q9BRN9 247 aa12.12□□□□□ -0.47
RXRB-202ENST00000374685 CASC10Q5T4H9 136 aa12.11□□□□□ -0.47
RXRB-202ENST00000374685 FAM19A1Q7Z5A9 133 aa12.1□□□□□ -0.47
RXRB-202ENST00000374685 FP248Q71RG6 208 aaPredicted RBP12.1□□□□□ -0.47
RXRB-202ENST00000374685 ORMDL1Q9P0S3 153 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms