RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 C7orf33Q8WU49 177 aa10.05□□□□□ -0.8
HDHD3-202ENST00000374180 IGKCP01834 107 aa10.04□□□□□ -0.8
HDHD3-202ENST00000374180 RPL37AP61513 92 aaKnown RBP10.04□□□□□ -0.8
HDHD3-202ENST00000374180 ANKRD39Q53RE8 183 aa10.04□□□□□ -0.8
HDHD3-202ENST00000374180 INAFM2P0DMQ5 153 aa10.03□□□□□ -0.8
HDHD3-202ENST00000374180 HSD52Q0P140 79 aa10.02□□□□□ -0.81
HDHD3-202ENST00000374180 C2orf91Q6ZV80 131 aa10.02□□□□□ -0.81
HDHD3-202ENST00000374180 FAM168BA1KXE4 195 aa10.01□□□□□ -0.81
HDHD3-202ENST00000374180 SFTA2Q6UW10 78 aa10.01□□□□□ -0.81
HDHD3-202ENST00000374180 A6NDN8 102 aa10□□□□□ -0.81
HDHD3-202ENST00000374180 KRTAP10-4P60372 401 aaPredicted RBP10□□□□□ -0.81
HDHD3-202ENST00000374180 C9orf129Q5T035 196 aaKnown RBP10□□□□□ -0.81
HDHD3-202ENST00000374180 XAGE1AQ9HD64 81 aa10□□□□□ -0.81
HDHD3-202ENST00000374180 NMUP48645 174 aa9.99□□□□□ -0.81
HDHD3-202ENST00000374180 UBE2V1Q13404 147 aa9.99□□□□□ -0.81
HDHD3-202ENST00000374180 FAM19A5Q7Z5A7 132 aaPredicted RBP9.99□□□□□ -0.81
HDHD3-202ENST00000374180 ZNF625Q96I27 306 aaPredicted RBP9.99□□□□□ -0.81
HDHD3-202ENST00000374180 HIGD1BQ9P298 99 aa9.99□□□□□ -0.81
HDHD3-202ENST00000374180 PFN2P35080 140 aa9.98□□□□□ -0.81
HDHD3-202ENST00000374180 TAX1BP3O14907 124 aa9.98□□□□□ -0.81
HDHD3-202ENST00000374180 HERVK_113P61574 105 aa9.98□□□□□ -0.81
HDHD3-202ENST00000374180 PHF5AQ7RTV0 110 aaKnown RBP9.98□□□□□ -0.81
HDHD3-202ENST00000374180 ERG28Q9UKR5 140 aa9.98□□□□□ -0.81
HDHD3-202ENST00000374180 FLG2Q5D862 2391 aaPredicted RBP9.97□□□□□ -0.81
HDHD3-202ENST00000374180 COX17Q14061 63 aa9.97□□□□□ -0.81
HDHD3-202ENST00000374180 VAMP3Q15836 100 aa9.97□□□□□ -0.81
HDHD3-202ENST00000374180 TP73-AS1Q9UF72 201 aa9.97□□□□□ -0.81
HDHD3-202ENST00000374180 LEPROTO15243 131 aa9.95□□□□□ -0.82
HDHD3-202ENST00000374180 KRTAP7-1Q8IUC3 87 aa9.95□□□□□ -0.82
HDHD3-202ENST00000374180 PLEKHB2Q96CS7 222 aa9.95□□□□□ -0.82
HDHD3-202ENST00000374180 M0QXV9 152 aa9.94□□□□□ -0.82
HDHD3-202ENST00000374180 PCP2Q8IVA1 136 aa9.94□□□□□ -0.82
HDHD3-202ENST00000374180 NDUFA12Q9UI09 145 aa9.94□□□□□ -0.82
HDHD3-202ENST00000374180 HERV-K104P63124 156 aa9.93□□□□□ -0.82
HDHD3-202ENST00000374180 PRR3P79522 188 aaKnown RBP9.93□□□□□ -0.82
HDHD3-202ENST00000374180 SERTAD4-AS1Q5TG53 156 aa9.93□□□□□ -0.82
HDHD3-202ENST00000374180 MYMXA0A1B0GTQ4 84 aa9.92□□□□□ -0.82
HDHD3-202ENST00000374180 E9PLD3 99 aa9.92□□□□□ -0.82
HDHD3-202ENST00000374180 J3QQQ9 107 aa9.92□□□□□ -0.82
HDHD3-202ENST00000374180 LINC00158P58513 81 aa9.92□□□□□ -0.82
HDHD3-202ENST00000374180 TAL2Q16559 108 aa9.92□□□□□ -0.82
HDHD3-202ENST00000374180 TSPEAR-AS2P59090 65 aa9.91□□□□□ -0.82
HDHD3-202ENST00000374180 C22orf24Q9Y442 160 aa9.91□□□□□ -0.82
HDHD3-202ENST00000374180 MYCBP2O75592 4640 aa9.91□□□□□ -0.82
HDHD3-202ENST00000374180 A0A0U1RRA0 63 aa9.91□□□□□ -0.82
HDHD3-202ENST00000374180 LGALS3P17931 250 aaKnown RBP9.91□□□□□ -0.82
HDHD3-202ENST00000374180 MEIG1Q5JSS6 88 aa9.91□□□□□ -0.82
HDHD3-202ENST00000374180 Q6ZVH6 145 aa9.91□□□□□ -0.82
HDHD3-202ENST00000374180 SND1-IT1Q9HBX3 110 aa9.91□□□□□ -0.82
HDHD3-202ENST00000374180 PKHD1L1Q86WI1 4243 aa9.9□□□□□ -0.82
HDHD3-202ENST00000374180 IGKV2D-26A0A0A0MRZ7 120 aa9.9□□□□□ -0.83
HDHD3-202ENST00000374180 C9orf118A6NHY6 69 aa9.9□□□□□ -0.83
HDHD3-202ENST00000374180 UBE2BP63146 152 aa9.9□□□□□ -0.83
HDHD3-202ENST00000374180 PSORS1C2Q9UIG4 136 aa9.9□□□□□ -0.83
HDHD3-202ENST00000374180 PLA2G2DQ9UNK4 145 aa9.9□□□□□ -0.83
HDHD3-202ENST00000374180 SMIM13P0DJ93 91 aa9.89□□□□□ -0.83
HDHD3-202ENST00000374180 GTF2H5Q6ZYL4 71 aa9.89□□□□□ -0.83
HDHD3-202ENST00000374180 MRPL55Q7Z7F7 128 aaKnown RBP9.87□□□□□ -0.83
HDHD3-202ENST00000374180 KRTAP11-1Q8IUC1 163 aa9.87□□□□□ -0.83
HDHD3-202ENST00000374180 C1orf137Q5JT78 98 aa9.86□□□□□ -0.83
HDHD3-202ENST00000374180 CEND1Q8N111 149 aa9.86□□□□□ -0.83
HDHD3-202ENST00000374180 NKAPP1Q8N9T2 125 aa9.86□□□□□ -0.83
HDHD3-202ENST00000374180 IGLV5-37A0A075B6J1 123 aa9.85□□□□□ -0.83
HDHD3-202ENST00000374180 RPL24P83731 157 aaKnown RBP9.85□□□□□ -0.83
HDHD3-202ENST00000374180 GAGE10A6NGK3 116 aa9.85□□□□□ -0.83
HDHD3-202ENST00000374180 MIR7-3HGQ8N6C7 128 aa9.85□□□□□ -0.83
HDHD3-202ENST00000374180 LINC00167Q96N53 147 aa9.84□□□□□ -0.83
HDHD3-202ENST00000374180 VPREB1P12018 145 aa9.83□□□□□ -0.84
HDHD3-202ENST00000374180 H3BUT2 72 aa9.82□□□□□ -0.84
HDHD3-202ENST00000374180 SRSF9Q13242 221 aaKnown RBP eCLIP9.82□□□□□ -0.844e-6■□□□□ 8.5
HDHD3-202ENST00000374180 HIST1H4GQ99525 98 aa9.82□□□□□ -0.84
HDHD3-202ENST00000374180 TTTY13Q9BZ97 58 aa9.82□□□□□ -0.84
HDHD3-202ENST00000374180 DMBT1Q9UGM3 2413 aaPredicted RBP9.81□□□□□ -0.84
HDHD3-202ENST00000374180 RPL37AP8A6NKH3 93 aa9.81□□□□□ -0.84
HDHD3-202ENST00000374180 K7EP34 96 aa9.81□□□□□ -0.84
HDHD3-202ENST00000374180 FABP2P12104 132 aa9.81□□□□□ -0.84
HDHD3-202ENST00000374180 SPINK6Q6UWN8 80 aa9.81□□□□□ -0.84
HDHD3-202ENST00000374180 CBY1Q9Y3M2 126 aa9.81□□□□□ -0.84
HDHD3-202ENST00000374180 A0A0J9YXY3 114 aa9.8□□□□□ -0.84
HDHD3-202ENST00000374180 A0A1W2PPM0 123 aa9.8□□□□□ -0.84
HDHD3-202ENST00000374180 ZNF815PA8K554 130 aa9.8□□□□□ -0.84
HDHD3-202ENST00000374180 IGLV7-43P04211 117 aa9.8□□□□□ -0.84
HDHD3-202ENST00000374180 FXYD2P54710 66 aa9.8□□□□□ -0.84
HDHD3-202ENST00000374180 DAND5Q8N907 189 aa9.8□□□□□ -0.84
HDHD3-202ENST00000374180 Q8NDZ9 215 aa9.8□□□□□ -0.84
HDHD3-202ENST00000374180 RAB37Q96AX2 223 aa9.79□□□□□ -0.84
HDHD3-202ENST00000374180 LRP1Q07954 4544 aaKnown RBP9.79□□□□□ -0.84
HDHD3-202ENST00000374180 TMEM238LA0A1B0GVL6 79 aa9.79□□□□□ -0.84
HDHD3-202ENST00000374180 A6NJY4 79 aa9.79□□□□□ -0.84
HDHD3-202ENST00000374180 KRTAP29-1A8MX34 341 aaPredicted RBP9.79□□□□□ -0.84
HDHD3-202ENST00000374180 OXTP01178 125 aa9.79□□□□□ -0.84
HDHD3-202ENST00000374180 NHP2Q9NX24 153 aaKnown RBP9.78□□□□□ -0.84
HDHD3-202ENST00000374180 IGKV2-28A0A075B6P5 120 aa9.77□□□□□ -0.85
HDHD3-202ENST00000374180 J3QL48 77 aa9.77□□□□□ -0.85
HDHD3-202ENST00000374180 IGKV2D-28P01615 120 aa9.77□□□□□ -0.85
HDHD3-202ENST00000374180 SCGB1D4Q6XE38 83 aa9.77□□□□□ -0.85
HDHD3-202ENST00000374180 SPCS1Q9Y6A9 102 aa9.77□□□□□ -0.85
HDHD3-202ENST00000374180 FAT3Q8TDW7 4589 aa9.76□□□□□ -0.85
HDHD3-202ENST00000374180 LOC107984156A0A0G2JMH3 177 aa9.76□□□□□ -0.85
HDHD3-202ENST00000374180 ADAMTSL4-AS1Q5T5F5 129 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms