RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 TMEM126AQ9H061 195 aa15.99■□□□□ 0.15
CDK9-201ENST00000373264 XAGE1AQ9HD64 81 aa15.98■□□□□ 0.15
CDK9-201ENST00000373264 C6orf48Q9UBA6 75 aa15.97■□□□□ 0.15
CDK9-201ENST00000373264 Q8N814 137 aa15.96■□□□□ 0.15
CDK9-201ENST00000373264 RPL18AQ02543 176 aaKnown RBP15.96■□□□□ 0.15
CDK9-201ENST00000373264 S100A7L2Q5SY68 101 aa15.95■□□□□ 0.14
CDK9-201ENST00000373264 OBSCN-AS1Q96MR7 158 aa15.95■□□□□ 0.14
CDK9-201ENST00000373264 ORMDL1Q9P0S3 153 aa15.95■□□□□ 0.14
CDK9-201ENST00000373264 TRBV7-7A0A0K0K1E9 115 aa15.95■□□□□ 0.14
CDK9-201ENST00000373264 A0A0J9YWU9 116 aa15.94■□□□□ 0.14
CDK9-201ENST00000373264 SDIM1Q6ZPB5 146 aa15.94■□□□□ 0.14
CDK9-201ENST00000373264 ESRGQ1W209 222 aa15.94■□□□□ 0.14
CDK9-201ENST00000373264 CCDC179H3BU77 68 aa15.93■□□□□ 0.14
CDK9-201ENST00000373264 LINC00643Q86TS7 51 aa15.91■□□□□ 0.14
CDK9-201ENST00000373264 COL6A5A8TX70 2615 aa15.91■□□□□ 0.14
CDK9-201ENST00000373264 PRB2P02812 416 aaPredicted RBP15.9■□□□□ 0.14
CDK9-201ENST00000373264 KRTAP26-1Q6PEX3 210 aa15.9■□□□□ 0.14
CDK9-201ENST00000373264 NBEAL1Q6ZS30 2694 aa15.9■□□□□ 0.14
CDK9-201ENST00000373264 LINC00167Q96N53 147 aa15.9■□□□□ 0.14
CDK9-201ENST00000373264 LINC00846Q9NV44 126 aa15.9■□□□□ 0.14
CDK9-201ENST00000373264 C3orf56Q8N813 242 aa15.89■□□□□ 0.13
CDK9-201ENST00000373264 EGFEM1PQ0D2K5 195 aa15.89■□□□□ 0.13
CDK9-201ENST00000373264 FAM236AA0A1B0GUQ0 79 aa15.88■□□□□ 0.13
CDK9-201ENST00000373264 FAM236BA0A1B0GV22 79 aa15.88■□□□□ 0.13
CDK9-201ENST00000373264 DNAH3Q8TD57 4116 aa15.88■□□□□ 0.13
CDK9-201ENST00000373264 B5MCH6 92 aa15.86■□□□□ 0.13
CDK9-201ENST00000373264 TRBV10-3A0A0K0K1G6 114 aa15.85■□□□□ 0.13
CDK9-201ENST00000373264 IGLV6-57P01721 117 aa15.84■□□□□ 0.13
CDK9-201ENST00000373264 LINC00575Q6W349 94 aa15.84■□□□□ 0.13
CDK9-201ENST00000373264 C15orf56Q8N910 161 aa15.84■□□□□ 0.13
CDK9-201ENST00000373264 ZNF561-AS1K7EIQ3 104 aa15.84■□□□□ 0.13
CDK9-201ENST00000373264 CAMK2N2Q96S95 79 aa15.84■□□□□ 0.13
CDK9-201ENST00000373264 DEFB131BA0A096LNP1 70 aa15.83■□□□□ 0.12
CDK9-201ENST00000373264 Q6ZRU5 148 aa15.83■□□□□ 0.12
CDK9-201ENST00000373264 GVQW2A0A096LPI5 108 aaPredicted RBP15.83■□□□□ 0.12
CDK9-201ENST00000373264 H3BNG1 76 aa15.83■□□□□ 0.12
CDK9-201ENST00000373264 IGKV3D-7A0A0C4DH55 119 aa15.82■□□□□ 0.12
CDK9-201ENST00000373264 C11orf45Q8TAV5 145 aa15.8■□□□□ 0.12
CDK9-201ENST00000373264 BAHCC1Q9P281 2608 aa15.8■□□□□ 0.12
CDK9-201ENST00000373264 A0A1B0GX51 115 aa15.79■□□□□ 0.12
CDK9-201ENST00000373264 TMEM256-PLSCR3K7ERE1 68 aa15.78■□□□□ 0.12
CDK9-201ENST00000373264 IGKV2D-24A0A075B6R9 120 aa15.77■□□□□ 0.12
CDK9-201ENST00000373264 hADV29S1A0JD25 119 aa15.77■□□□□ 0.12
CDK9-201ENST00000373264 IMUPQ9GZP8 106 aa15.77■□□□□ 0.12
CDK9-201ENST00000373264 SS18L2Q9UHA2 77 aa15.77■□□□□ 0.11
CDK9-201ENST00000373264 CCKP06307 115 aa15.76■□□□□ 0.11
CDK9-201ENST00000373264 TRAV23DV6A0A075B6W5 121 aa15.74■□□□□ 0.11
CDK9-201ENST00000373264 Q6ZQY7 126 aa15.74■□□□□ 0.11
CDK9-201ENST00000373264 C1orf43Q9BWL3 253 aa15.74■□□□□ 0.11
CDK9-201ENST00000373264 MUC7Q8TAX7 377 aa15.73■□□□□ 0.11
CDK9-201ENST00000373264 A0A087WVE0 104 aa15.73■□□□□ 0.11
CDK9-201ENST00000373264 VPREB1P12018 145 aa15.73■□□□□ 0.11
CDK9-201ENST00000373264 M0R2N4 97 aa15.71■□□□□ 0.11
CDK9-201ENST00000373264 Q6ZRP5 223 aa15.71■□□□□ 0.11
CDK9-201ENST00000373264 MRAPQ8TCY5 172 aa15.71■□□□□ 0.11
CDK9-201ENST00000373264 JMJD7-PLA2G4BH0Y9G9 81 aa15.71■□□□□ 0.1
CDK9-201ENST00000373264 LINC01556Q5JQF7 62 aa15.71■□□□□ 0.1
CDK9-201ENST00000373264 ZNF73O43830 326 aaPredicted RBP15.69■□□□□ 0.1
CDK9-201ENST00000373264 HUWE1Q7Z6Z7 4374 aaKnown RBP15.69■□□□□ 0.1
CDK9-201ENST00000373264 DIRC1Q969H9 104 aa15.68■□□□□ 0.1
CDK9-201ENST00000373264 LAMTOR3Q9UHA4 124 aa15.68■□□□□ 0.1
CDK9-201ENST00000373264 CASC10Q5T4H9 136 aa15.67■□□□□ 0.1
CDK9-201ENST00000373264 NDUFC2-KCTD14E9PQ53 114 aa15.67■□□□□ 0.1
CDK9-201ENST00000373264 MGAM2Q2M2H8 2515 aa15.66■□□□□ 0.1
CDK9-201ENST00000373264 Q6JHZ5 121 aa15.66■□□□□ 0.1
CDK9-201ENST00000373264 LYSTQ99698 3801 aa15.65■□□□□ 0.1
CDK9-201ENST00000373264 LINC00588Q9Y4M8 146 aa15.63■□□□□ 0.09
CDK9-201ENST00000373264 RBM3P98179 157 aaKnown RBP15.62■□□□□ 0.09
CDK9-201ENST00000373264 C2orf48Q96LS8 159 aa15.62■□□□□ 0.09
CDK9-201ENST00000373264 COX7BP24311 80 aa15.61■□□□□ 0.09
CDK9-201ENST00000373264 SYCNQ0VAF6 134 aa15.61■□□□□ 0.09
CDK9-201ENST00000373264 Q6ZQT0 140 aa15.61■□□□□ 0.09
CDK9-201ENST00000373264 DNAH1Q9P2D7 4330 aa15.61■□□□□ 0.09
CDK9-201ENST00000373264 ELOF1P60002 83 aaKnown RBP15.6■□□□□ 0.09
CDK9-201ENST00000373264 M0R378 163 aa15.59■□□□□ 0.09
CDK9-201ENST00000373264 DNAH10OSP0CZ25 163 aa15.59■□□□□ 0.09
CDK9-201ENST00000373264 HIST1H4AP62805 103 aaKnown RBP15.59■□□□□ 0.09
CDK9-201ENST00000373264 COL7A1Q02388 2944 aa15.59■□□□□ 0.09
CDK9-201ENST00000373264 SERTAD4-AS1Q5TG53 156 aa15.59■□□□□ 0.09
CDK9-201ENST00000373264 K7EIL1 84 aa15.57■□□□□ 0.08
CDK9-201ENST00000373264 FAM19A1Q7Z5A9 133 aa15.55■□□□□ 0.08
CDK9-201ENST00000373264 STAB2Q8WWQ8 2551 aa15.54■□□□□ 0.08
CDK9-201ENST00000373264 TRAV10A0A0B4J240 114 aa15.54■□□□□ 0.08
CDK9-201ENST00000373264 FAM168BA1KXE4 195 aa15.53■□□□□ 0.08
CDK9-201ENST00000373264 DNAH10Q8IVF4 4471 aa15.53■□□□□ 0.08
CDK9-201ENST00000373264 LINC00528Q8N1L1 170 aa15.52■□□□□ 0.08
CDK9-201ENST00000373264 LOC110117498A0A087WWA1 95 aa15.51■□□□□ 0.07
CDK9-201ENST00000373264 TM2D3Q9BRN9 247 aa15.51■□□□□ 0.07
CDK9-201ENST00000373264 USP17L23D6RBM5 183 aa15.51■□□□□ 0.07
CDK9-201ENST00000373264 C3orf22Q8N5N4 141 aa15.51■□□□□ 0.07
CDK9-201ENST00000373264 DSCR8Q96T75 97 aa15.51■□□□□ 0.07
CDK9-201ENST00000373264 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP15.5■□□□□ 0.07
CDK9-201ENST00000373264 C7orf33Q8WU49 177 aa15.49■□□□□ 0.07
CDK9-201ENST00000373264 C9orf153Q5TBE3 101 aa15.48■□□□□ 0.07
CDK9-201ENST00000373264 UBL5Q9BZL1 73 aa15.48■□□□□ 0.07
CDK9-201ENST00000373264 RPL37AP8A6NKH3 93 aa15.48■□□□□ 0.07
CDK9-201ENST00000373264 NKAPP1Q8N9T2 125 aa15.45■□□□□ 0.06
CDK9-201ENST00000373264 CYSTM1Q9H1C7 97 aa15.45■□□□□ 0.06
CDK9-201ENST00000373264 TRBV7-6A0A0J9YX20 115 aa15.45■□□□□ 0.06
CDK9-201ENST00000373264 ATOX1O00244 68 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms