RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 PRB2P02812 416 aaPredicted RBP12.53□□□□□ -0.4
USP49-202ENST00000373010 DNAH3Q8TD57 4116 aa12.53□□□□□ -0.4
USP49-202ENST00000373010 INAFM2P0DMQ5 153 aa12.53□□□□□ -0.4
USP49-202ENST00000373010 S100A7L2Q5SY68 101 aa12.53□□□□□ -0.4
USP49-202ENST00000373010 ACYP1P07311 99 aa12.52□□□□□ -0.4
USP49-202ENST00000373010 GVQW2A0A096LPI5 108 aaPredicted RBP12.52□□□□□ -0.41
USP49-202ENST00000373010 C6orf99Q4VX62 202 aa12.51□□□□□ -0.41
USP49-202ENST00000373010 GAGE2AQ6NT46 116 aa12.51□□□□□ -0.41
USP49-202ENST00000373010 SMCR5Q8TEV8 140 aa12.51□□□□□ -0.41
USP49-202ENST00000373010 C14orf132Q9NPU4 83 aa12.51□□□□□ -0.41
USP49-202ENST00000373010 ORMDL1Q9P0S3 153 aa12.51□□□□□ -0.41
USP49-202ENST00000373010 RPL18AQ02543 176 aaKnown RBP12.5□□□□□ -0.41
USP49-202ENST00000373010 MUC7Q8TAX7 377 aa12.5□□□□□ -0.41
USP49-202ENST00000373010 XAGE1AQ9HD64 81 aa12.5□□□□□ -0.41
USP49-202ENST00000373010 Q8N814 137 aa12.5□□□□□ -0.41
USP49-202ENST00000373010 ZNF561-AS1K7EIQ3 104 aa12.49□□□□□ -0.41
USP49-202ENST00000373010 COL6A5A8TX70 2615 aa12.49□□□□□ -0.41
USP49-202ENST00000373010 BAHCC1Q9P281 2608 aa12.49□□□□□ -0.41
USP49-202ENST00000373010 OBSCN-AS1Q96MR7 158 aa12.48□□□□□ -0.41
USP49-202ENST00000373010 LINC00167Q96N53 147 aa12.48□□□□□ -0.41
USP49-202ENST00000373010 CAMK2N2Q96S95 79 aa12.48□□□□□ -0.41
USP49-202ENST00000373010 Q6Q795 121 aa12.48□□□□□ -0.41
USP49-202ENST00000373010 C15orf56Q8N910 161 aa12.48□□□□□ -0.41
USP49-202ENST00000373010 A0A1B0GX51 115 aa12.46□□□□□ -0.42
USP49-202ENST00000373010 LINC01556Q5JQF7 62 aa12.46□□□□□ -0.42
USP49-202ENST00000373010 ANAPC13Q9BS18 74 aa12.46□□□□□ -0.42
USP49-202ENST00000373010 IGLV6-57P01721 117 aa12.45□□□□□ -0.42
USP49-202ENST00000373010 Q6ZRU5 148 aa12.45□□□□□ -0.42
USP49-202ENST00000373010 C1orf43Q9BWL3 253 aa12.45□□□□□ -0.42
USP49-202ENST00000373010 IGKV2D-24A0A075B6R9 120 aa12.44□□□□□ -0.42
USP49-202ENST00000373010 NDUFV3P56181 108 aaKnown RBP12.43□□□□□ -0.42
USP49-202ENST00000373010 SDIM1Q6ZPB5 146 aa12.43□□□□□ -0.42
USP49-202ENST00000373010 NBEAL1Q6ZS30 2694 aa12.43□□□□□ -0.42
USP49-202ENST00000373010 LINC00575Q6W349 94 aa12.42□□□□□ -0.42
USP49-202ENST00000373010 MRAPQ8TCY5 172 aa12.42□□□□□ -0.42
USP49-202ENST00000373010 TRBV10-3A0A0K0K1G6 114 aa12.42□□□□□ -0.42
USP49-202ENST00000373010 TRBV7-7A0A0K0K1E9 115 aa12.41□□□□□ -0.42
USP49-202ENST00000373010 NHLRC4P0CG21 123 aaPredicted RBP12.41□□□□□ -0.42
USP49-202ENST00000373010 LINC00643Q86TS7 51 aa12.41□□□□□ -0.42
USP49-202ENST00000373010 TRAV10A0A0B4J240 114 aa12.39□□□□□ -0.43
USP49-202ENST00000373010 K7EIL1 84 aa12.39□□□□□ -0.43
USP49-202ENST00000373010 C2orf48Q96LS8 159 aa12.39□□□□□ -0.43
USP49-202ENST00000373010 TMEM256-PLSCR3K7ERE1 68 aa12.38□□□□□ -0.43
USP49-202ENST00000373010 hADV29S1A0JD25 119 aa12.38□□□□□ -0.43
USP49-202ENST00000373010 DNAH10OSP0CZ25 163 aa12.38□□□□□ -0.43
USP49-202ENST00000373010 VPREB1P12018 145 aa12.37□□□□□ -0.43
USP49-202ENST00000373010 TM2D3Q9BRN9 247 aa12.37□□□□□ -0.43
USP49-202ENST00000373010 TRAV23DV6A0A075B6W5 121 aa12.37□□□□□ -0.43
USP49-202ENST00000373010 LINC00588Q9Y4M8 146 aa12.36□□□□□ -0.43
USP49-202ENST00000373010 NDUFC2-KCTD14E9PQ53 114 aa12.36□□□□□ -0.43
USP49-202ENST00000373010 LINC00846Q9NV44 126 aa12.35□□□□□ -0.43
USP49-202ENST00000373010 Q6ZRP5 223 aa12.34□□□□□ -0.43
USP49-202ENST00000373010 DIRC1Q969H9 104 aa12.33□□□□□ -0.43
USP49-202ENST00000373010 JMJD7-PLA2G4BH0Y9G9 81 aa12.33□□□□□ -0.44
USP49-202ENST00000373010 SYCNQ0VAF6 134 aa12.32□□□□□ -0.44
USP49-202ENST00000373010 ZNF73O43830 326 aaPredicted RBP12.32□□□□□ -0.44
USP49-202ENST00000373010 CCKP06307 115 aa12.32□□□□□ -0.44
USP49-202ENST00000373010 IMUPQ9GZP8 106 aa12.32□□□□□ -0.44
USP49-202ENST00000373010 HUWE1Q7Z6Z7 4374 aaKnown RBP12.31□□□□□ -0.44
USP49-202ENST00000373010 Q6ZQY7 126 aa12.31□□□□□ -0.44
USP49-202ENST00000373010 M0R378 163 aa12.3□□□□□ -0.44
USP49-202ENST00000373010 CASC10Q5T4H9 136 aa12.3□□□□□ -0.44
USP49-202ENST00000373010 FAM236AA0A1B0GUQ0 79 aa12.29□□□□□ -0.44
USP49-202ENST00000373010 FAM236BA0A1B0GV22 79 aa12.29□□□□□ -0.44
USP49-202ENST00000373010 COX7BP24311 80 aa12.29□□□□□ -0.44
USP49-202ENST00000373010 F8WDY8 70 aa12.27□□□□□ -0.44
USP49-202ENST00000373010 MGAM2Q2M2H8 2515 aa12.27□□□□□ -0.45
USP49-202ENST00000373010 IGKV3D-7A0A0C4DH55 119 aa12.27□□□□□ -0.45
USP49-202ENST00000373010 ELOF1P60002 83 aaKnown RBP12.26□□□□□ -0.45
USP49-202ENST00000373010 LAMTOR3Q9UHA4 124 aa12.26□□□□□ -0.45
USP49-202ENST00000373010 CCDC179H3BU77 68 aa12.26□□□□□ -0.45
USP49-202ENST00000373010 USP17L23D6RBM5 183 aa12.25□□□□□ -0.45
USP49-202ENST00000373010 RBM3P98179 157 aaKnown RBP12.23□□□□□ -0.45
USP49-202ENST00000373010 Q6JHZ5 121 aa12.23□□□□□ -0.45
USP49-202ENST00000373010 SERTAD4-AS1Q5TG53 156 aa12.22□□□□□ -0.45
USP49-202ENST00000373010 TRBV7-6A0A0J9YX20 115 aa12.22□□□□□ -0.45
USP49-202ENST00000373010 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.2□□□□□ -0.46
USP49-202ENST00000373010 Q6ZQT0 140 aa12.2□□□□□ -0.46
USP49-202ENST00000373010 LINC00528Q8N1L1 170 aa12.19□□□□□ -0.46
USP49-202ENST00000373010 NKAPP1Q8N9T2 125 aa12.19□□□□□ -0.46
USP49-202ENST00000373010 B5MCH6 92 aa12.19□□□□□ -0.46
USP49-202ENST00000373010 DNAH1Q9P2D7 4330 aa12.19□□□□□ -0.46
USP49-202ENST00000373010 M0R2N4 97 aa12.18□□□□□ -0.46
USP49-202ENST00000373010 C7orf33Q8WU49 177 aa12.18□□□□□ -0.46
USP49-202ENST00000373010 COL7A1Q02388 2944 aa12.17□□□□□ -0.46
USP49-202ENST00000373010 LOC110117498A0A087WWA1 95 aa12.17□□□□□ -0.46
USP49-202ENST00000373010 TLX1NBP0CAT3 122 aa12.17□□□□□ -0.46
USP49-202ENST00000373010 RMI2Q96E14 147 aa12.17□□□□□ -0.46
USP49-202ENST00000373010 UPK3BQ9BT76 320 aa12.17□□□□□ -0.46
USP49-202ENST00000373010 FAM168BA1KXE4 195 aa12.16□□□□□ -0.46
USP49-202ENST00000373010 H3BQ85 93 aa12.16□□□□□ -0.46
USP49-202ENST00000373010 A0A087WVE0 104 aa12.15□□□□□ -0.46
USP49-202ENST00000373010 STAB2Q8WWQ8 2551 aa12.15□□□□□ -0.46
USP49-202ENST00000373010 DSCR8Q96T75 97 aa12.15□□□□□ -0.47
USP49-202ENST00000373010 KCNQ1DNQ9H478 68 aa12.14□□□□□ -0.47
USP49-202ENST00000373010 HIST1H4AP62805 103 aaKnown RBP12.12□□□□□ -0.47
USP49-202ENST00000373010 RPL37AP8A6NKH3 93 aa12.12□□□□□ -0.47
USP49-202ENST00000373010 MDFIQ99750 246 aa12.11□□□□□ -0.47
USP49-202ENST00000373010 KRTAP1-5Q9BYS1 174 aa12.11□□□□□ -0.47
USP49-202ENST00000373010 UBL5Q9BZL1 73 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms