RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 C9orf116Q5BN46 136 aaPredicted RBP12.19□□□□□ -0.46
CD40-201ENST00000372276 GHRHP01286 108 aa12.18□□□□□ -0.46
CD40-201ENST00000372276 NBEAL2Q6ZNJ1 2754 aa12.17□□□□□ -0.46
CD40-201ENST00000372276 VWFP04275 2813 aa12.17□□□□□ -0.46
CD40-201ENST00000372276 ZNF561-AS1K7EIQ3 104 aa12.17□□□□□ -0.46
CD40-201ENST00000372276 C2orf48Q96LS8 159 aa12.17□□□□□ -0.46
CD40-201ENST00000372276 IGLV6-57P01721 117 aa12.16□□□□□ -0.46
CD40-201ENST00000372276 C10orf25Q5T742 122 aa12.16□□□□□ -0.46
CD40-201ENST00000372276 PRR3P79522 188 aaKnown RBP12.15□□□□□ -0.46
CD40-201ENST00000372276 C6orf223Q8N319 242 aa12.15□□□□□ -0.46
CD40-201ENST00000372276 ANK2Q01484 3957 aa12.15□□□□□ -0.46
CD40-201ENST00000372276 NCR3O14931 201 aa12.15□□□□□ -0.47
CD40-201ENST00000372276 C6orf99Q4VX62 202 aa12.15□□□□□ -0.47
CD40-201ENST00000372276 LINC00575Q6W349 94 aa12.15□□□□□ -0.47
CD40-201ENST00000372276 DNHD1Q96M86 4753 aa12.14□□□□□ -0.47
CD40-201ENST00000372276 LINC01556Q5JQF7 62 aa12.14□□□□□ -0.47
CD40-201ENST00000372276 Q6ZTC4 211 aa12.14□□□□□ -0.47
CD40-201ENST00000372276 C14orf132Q9NPU4 83 aa12.13□□□□□ -0.47
CD40-201ENST00000372276 C6orf48Q9UBA6 75 aa12.13□□□□□ -0.47
CD40-201ENST00000372276 TRBV7-6A0A0J9YX20 115 aa12.12□□□□□ -0.47
CD40-201ENST00000372276 NHLRC4P0CG21 123 aaPredicted RBP12.12□□□□□ -0.47
CD40-201ENST00000372276 WFDC10BQ8IUB3 73 aa12.12□□□□□ -0.47
CD40-201ENST00000372276 C11orf45Q8TAV5 145 aa12.12□□□□□ -0.47
CD40-201ENST00000372276 hADV29S1A0JD25 119 aa12.11□□□□□ -0.47
CD40-201ENST00000372276 CCKP06307 115 aa12.11□□□□□ -0.47
CD40-201ENST00000372276 SMCR5Q8TEV8 140 aa12.11□□□□□ -0.47
CD40-201ENST00000372276 CAMK2N2Q96S95 79 aa12.11□□□□□ -0.47
CD40-201ENST00000372276 RETNQ9HD89 108 aa12.11□□□□□ -0.47
CD40-201ENST00000372276 DEFB131BA0A096LNP1 70 aa12.11□□□□□ -0.47
CD40-201ENST00000372276 SLPIP03973 132 aa12.11□□□□□ -0.47
CD40-201ENST00000372276 KRTAP26-1Q6PEX3 210 aa12.1□□□□□ -0.47
CD40-201ENST00000372276 C1orf43Q9BWL3 253 aa12.1□□□□□ -0.47
CD40-201ENST00000372276 ESRGQ1W209 222 aa12.09□□□□□ -0.47
CD40-201ENST00000372276 Q6JHZ5 121 aa12.09□□□□□ -0.47
CD40-201ENST00000372276 RPL18AQ02543 176 aaKnown RBP12.08□□□□□ -0.48
CD40-201ENST00000372276 DIRC1Q969H9 104 aa12.08□□□□□ -0.48
CD40-201ENST00000372276 TRAV23DV6A0A075B6W5 121 aa12.07□□□□□ -0.48
CD40-201ENST00000372276 Q8NDZ9 215 aa12.07□□□□□ -0.48
CD40-201ENST00000372276 PDE6GP18545 87 aa12.06□□□□□ -0.48
CD40-201ENST00000372276 LINC00526Q96FQ7 95 aa12.06□□□□□ -0.48
CD40-201ENST00000372276 NDUFC2-KCTD14E9PQ53 114 aa12.05□□□□□ -0.48
CD40-201ENST00000372276 M0R378 163 aa12.05□□□□□ -0.48
CD40-201ENST00000372276 C9orf129Q5T035 196 aaKnown RBP12.05□□□□□ -0.48
CD40-201ENST00000372276 ATP5EP2Q5VTU8 51 aa12.05□□□□□ -0.48
CD40-201ENST00000372276 DNAH10OSP0CZ25 163 aa12.04□□□□□ -0.48
CD40-201ENST00000372276 TRAV10A0A0B4J240 114 aa12.04□□□□□ -0.48
CD40-201ENST00000372276 FAM236AA0A1B0GUQ0 79 aa12.04□□□□□ -0.48
CD40-201ENST00000372276 FAM236BA0A1B0GV22 79 aa12.04□□□□□ -0.48
CD40-201ENST00000372276 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.04□□□□□ -0.48
CD40-201ENST00000372276 C15orf56Q8N910 161 aa12.03□□□□□ -0.48
CD40-201ENST00000372276 TRBV10-3A0A0K0K1G6 114 aa12.02□□□□□ -0.49
CD40-201ENST00000372276 RBM3P98179 157 aaKnown RBP12.02□□□□□ -0.49
CD40-201ENST00000372276 LINC00846Q9NV44 126 aa12.02□□□□□ -0.49
CD40-201ENST00000372276 LOC110117498A0A087WWA1 95 aa12.01□□□□□ -0.49
CD40-201ENST00000372276 ZNF73O43830 326 aaPredicted RBP12.01□□□□□ -0.49
CD40-201ENST00000372276 VPREB1P12018 145 aa12.01□□□□□ -0.49
CD40-201ENST00000372276 COX7BP24311 80 aa12.01□□□□□ -0.49
CD40-201ENST00000372276 HIGD2BQ4VC39 106 aa12.01□□□□□ -0.49
CD40-201ENST00000372276 Q6ZRU5 148 aa12□□□□□ -0.49
CD40-201ENST00000372276 XAGE1AQ9HD64 81 aa12□□□□□ -0.49
CD40-201ENST00000372276 IGKV2D-24A0A075B6R9 120 aa11.99□□□□□ -0.49
CD40-201ENST00000372276 RMI2Q96E14 147 aa11.99□□□□□ -0.49
CD40-201ENST00000372276 ELOF1P60002 83 aaKnown RBP11.98□□□□□ -0.49
CD40-201ENST00000372276 SYCNQ0VAF6 134 aa11.98□□□□□ -0.49
CD40-201ENST00000372276 TRRAPQ9Y4A5 3859 aa11.97□□□□□ -0.49
CD40-201ENST00000372276 ATOX1O00244 68 aa11.97□□□□□ -0.49
CD40-201ENST00000372276 LAMTOR3Q9UHA4 124 aa11.97□□□□□ -0.49
CD40-201ENST00000372276 UBL5Q9BZL1 73 aa11.97□□□□□ -0.49
CD40-201ENST00000372276 HIST1H4AP62805 103 aaKnown RBP11.96□□□□□ -0.5
CD40-201ENST00000372276 DSCR8Q96T75 97 aa11.96□□□□□ -0.5
CD40-201ENST00000372276 CCDC179H3BU77 68 aa11.95□□□□□ -0.5
CD40-201ENST00000372276 TLX1NBP0CAT3 122 aa11.95□□□□□ -0.5
CD40-201ENST00000372276 Q6ZQY7 126 aa11.95□□□□□ -0.5
CD40-201ENST00000372276 TM2D3Q9BRN9 247 aa11.94□□□□□ -0.5
CD40-201ENST00000372276 B5MCH6 92 aa11.93□□□□□ -0.5
CD40-201ENST00000372276 Q6ZQT0 140 aa11.93□□□□□ -0.5
CD40-201ENST00000372276 PLA2G2DQ9UNK4 145 aa11.93□□□□□ -0.5
CD40-201ENST00000372276 UQCRQO14949 82 aa11.93□□□□□ -0.5
CD40-201ENST00000372276 PKD1L1Q8TDX9 2849 aa11.92□□□□□ -0.5
CD40-201ENST00000372276 C3orf22Q8N5N4 141 aa11.9□□□□□ -0.5
CD40-201ENST00000372276 MRAPQ8TCY5 172 aa11.9□□□□□ -0.5
CD40-201ENST00000372276 IGKV3D-7A0A0C4DH55 119 aa11.89□□□□□ -0.51
CD40-201ENST00000372276 Q6ZRP5 223 aa11.89□□□□□ -0.51
CD40-201ENST00000372276 NKAPP1Q8N9T2 125 aa11.89□□□□□ -0.51
CD40-201ENST00000372276 UPK3BQ9BT76 320 aa11.89□□□□□ -0.51
CD40-201ENST00000372276 LINC00528Q8N1L1 170 aa11.88□□□□□ -0.51
CD40-201ENST00000372276 KCNQ1DNQ9H478 68 aa11.88□□□□□ -0.51
CD40-201ENST00000372276 LINC00588Q9Y4M8 146 aa11.87□□□□□ -0.51
CD40-201ENST00000372276 MGAM2Q2M2H8 2515 aa11.87□□□□□ -0.51
CD40-201ENST00000372276 COX7CP15954 63 aa11.86□□□□□ -0.51
CD40-201ENST00000372276 IGLV5-37A0A075B6J1 123 aa11.86□□□□□ -0.51
CD40-201ENST00000372276 TRBV7-4A0A0J9YYF1 115 aa11.83□□□□□ -0.52
CD40-201ENST00000372276 CMYA5Q8N3K9 4069 aa11.83□□□□□ -0.52
CD40-201ENST00000372276 BCE1O60756 84 aa11.82□□□□□ -0.52
CD40-201ENST00000372276 DNAH3Q8TD57 4116 aa11.82□□□□□ -0.52
CD40-201ENST00000372276 USP17L23D6RBM5 183 aa11.82□□□□□ -0.52
CD40-201ENST00000372276 C9orf153Q5TBE3 101 aa11.82□□□□□ -0.52
CD40-201ENST00000372276 K7EIL1 84 aa11.81□□□□□ -0.52
CD40-201ENST00000372276 DHRS4-AS1Q9P1J3 65 aa11.81□□□□□ -0.52
CD40-201ENST00000372276 FBN3Q75N90 2809 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms