RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 IGKV2D-26A0A0A0MRZ7 120 aa10.37□□□□□ -0.75
TMEM53-203ENST00000372242 PCP2Q8IVA1 136 aa10.37□□□□□ -0.75
TMEM53-203ENST00000372242 A0A087WYN8 130 aa10.36□□□□□ -0.75
TMEM53-203ENST00000372242 A6NDN8 102 aa10.36□□□□□ -0.75
TMEM53-203ENST00000372242 LGALS3P17931 250 aaKnown RBP10.36□□□□□ -0.75
TMEM53-203ENST00000372242 HIGD1BQ9P298 99 aa10.36□□□□□ -0.75
TMEM53-203ENST00000372242 ERG28Q9UKR5 140 aa10.36□□□□□ -0.75
TMEM53-203ENST00000372242 APOBP04114 4563 aaKnown RBP10.36□□□□□ -0.75
TMEM53-203ENST00000372242 NMUP48645 174 aa10.35□□□□□ -0.75
TMEM53-203ENST00000372242 SFTA2Q6UW10 78 aa10.35□□□□□ -0.75
TMEM53-203ENST00000372242 GTF2H5Q6ZYL4 71 aa10.35□□□□□ -0.75
TMEM53-203ENST00000372242 VPS25Q9BRG1 176 aa10.35□□□□□ -0.75
TMEM53-203ENST00000372242 LINC00474Q9P2X8 69 aa10.35□□□□□ -0.75
TMEM53-203ENST00000372242 DNAH8Q96JB1 4490 aa10.34□□□□□ -0.75
TMEM53-203ENST00000372242 A0A0U1RRA0 63 aa10.34□□□□□ -0.75
TMEM53-203ENST00000372242 MYMXA0A1B0GTQ4 84 aa10.34□□□□□ -0.75
TMEM53-203ENST00000372242 GAGE10A6NGK3 116 aa10.34□□□□□ -0.75
TMEM53-203ENST00000372242 C9orf118A6NHY6 69 aa10.34□□□□□ -0.75
TMEM53-203ENST00000372242 TTTY13Q9BZ97 58 aa10.34□□□□□ -0.75
TMEM53-203ENST00000372242 XAGE1AQ9HD64 81 aa10.34□□□□□ -0.75
TMEM53-203ENST00000372242 SMR3BP02814 79 aaPredicted RBP10.33□□□□□ -0.76
TMEM53-203ENST00000372242 C9orf129Q5T035 196 aaKnown RBP10.33□□□□□ -0.76
TMEM53-203ENST00000372242 A0A1W2PNN7 141 aa10.32□□□□□ -0.76
TMEM53-203ENST00000372242 FAM168BA1KXE4 195 aa10.32□□□□□ -0.76
TMEM53-203ENST00000372242 HERV-K104P63124 156 aa10.32□□□□□ -0.76
TMEM53-203ENST00000372242 LINC00158P58513 81 aa10.31□□□□□ -0.76
TMEM53-203ENST00000372242 MEIG1Q5JSS6 88 aa10.31□□□□□ -0.76
TMEM53-203ENST00000372242 PLAC8Q9NZF1 115 aa10.31□□□□□ -0.76
TMEM53-203ENST00000372242 SMIM13P0DJ93 91 aa10.3□□□□□ -0.76
TMEM53-203ENST00000372242 COX17Q14061 63 aa10.3□□□□□ -0.76
TMEM53-203ENST00000372242 K7EP34 96 aa10.3□□□□□ -0.76
TMEM53-203ENST00000372242 KRTAP17-1Q9BYP8 105 aa10.3□□□□□ -0.76
TMEM53-203ENST00000372242 HSPG2P98160 4391 aa10.28□□□□□ -0.76
TMEM53-203ENST00000372242 FAM19A5Q7Z5A7 132 aaPredicted RBP10.28□□□□□ -0.76
TMEM53-203ENST00000372242 RYR1P21817 5038 aa10.28□□□□□ -0.76
TMEM53-203ENST00000372242 ZNF815PA8K554 130 aa10.28□□□□□ -0.76
TMEM53-203ENST00000372242 KRTAP7-1Q8IUC3 87 aa10.28□□□□□ -0.76
TMEM53-203ENST00000372242 SND1-IT1Q9HBX3 110 aa10.28□□□□□ -0.76
TMEM53-203ENST00000372242 A0A0J9YXY3 114 aa10.27□□□□□ -0.77
TMEM53-203ENST00000372242 TAL2Q16559 108 aa10.26□□□□□ -0.77
TMEM53-203ENST00000372242 DAND5Q8N907 189 aa10.26□□□□□ -0.77
TMEM53-203ENST00000372242 SERTAD4-AS1Q5TG53 156 aa10.26□□□□□ -0.77
TMEM53-203ENST00000372242 MIR7-3HGQ8N6C7 128 aa10.26□□□□□ -0.77
TMEM53-203ENST00000372242 EPM2AB3EWF7 344 aa10.25□□□□□ -0.77
TMEM53-203ENST00000372242 H3BUT2 72 aa10.25□□□□□ -0.77
TMEM53-203ENST00000372242 LINC00528Q8N1L1 170 aa10.24□□□□□ -0.77
TMEM53-203ENST00000372242 A0A1W2PPM0 123 aa10.23□□□□□ -0.77
TMEM53-203ENST00000372242 ADAMTSL4-AS1Q5T5F5 129 aa10.23□□□□□ -0.77
TMEM53-203ENST00000372242 PHF5AQ7RTV0 110 aaKnown RBP10.23□□□□□ -0.77
TMEM53-203ENST00000372242 FXYD2P54710 66 aa10.22□□□□□ -0.77
TMEM53-203ENST00000372242 CEND1Q8N111 149 aa10.22□□□□□ -0.77
TMEM53-203ENST00000372242 Q8N1X5 172 aa10.22□□□□□ -0.77
TMEM53-203ENST00000372242 M0QXV9 152 aa10.21□□□□□ -0.77
TMEM53-203ENST00000372242 FABP2P12104 132 aa10.21□□□□□ -0.77
TMEM53-203ENST00000372242 SPCS1Q9Y6A9 102 aa10.21□□□□□ -0.77
TMEM53-203ENST00000372242 SCGB1D4Q6XE38 83 aa10.21□□□□□ -0.78
TMEM53-203ENST00000372242 Q8NDZ9 215 aa10.21□□□□□ -0.78
TMEM53-203ENST00000372242 LITAFQ99732 161 aa10.21□□□□□ -0.78
TMEM53-203ENST00000372242 C22orf24Q9Y442 160 aa10.2□□□□□ -0.78
TMEM53-203ENST00000372242 NPC2P61916 151 aa10.19□□□□□ -0.78
TMEM53-203ENST00000372242 Q5VSD8 79 aa10.19□□□□□ -0.78
TMEM53-203ENST00000372242 C7orf33Q8WU49 177 aa10.19□□□□□ -0.78
TMEM53-203ENST00000372242 PLA2G2DQ9UNK4 145 aa10.19□□□□□ -0.78
TMEM53-203ENST00000372242 FAT1Q14517 4588 aa10.18□□□□□ -0.78
TMEM53-203ENST00000372242 FAM229AH3BQW9 127 aa10.18□□□□□ -0.78
TMEM53-203ENST00000372242 EIF4EBP3O60516 100 aaPredicted RBP10.18□□□□□ -0.78
TMEM53-203ENST00000372242 TIMM17BO60830 172 aa10.17□□□□□ -0.78
TMEM53-203ENST00000372242 VPREB1P12018 145 aa10.17□□□□□ -0.78
TMEM53-203ENST00000372242 RAB37Q96AX2 223 aa10.17□□□□□ -0.78
TMEM53-203ENST00000372242 KRTAP11-1Q8IUC1 163 aa10.17□□□□□ -0.78
TMEM53-203ENST00000372242 NKAPP1Q8N9T2 125 aa10.17□□□□□ -0.78
TMEM53-203ENST00000372242 KRTAP4-5Q9BYR2 181 aa10.17□□□□□ -0.78
TMEM53-203ENST00000372242 HERC2O95714 4834 aa10.16□□□□□ -0.78
TMEM53-203ENST00000372242 A0A1B0GWB2 263 aa10.16□□□□□ -0.78
TMEM53-203ENST00000372242 TMEM238C9JI98 176 aa10.16□□□□□ -0.78
TMEM53-203ENST00000372242 PRR3P79522 188 aaKnown RBP10.16□□□□□ -0.78
TMEM53-203ENST00000372242 SOSTDC1Q6X4U4 206 aa10.16□□□□□ -0.78
TMEM53-203ENST00000372242 MRPL55Q7Z7F7 128 aaKnown RBP10.16□□□□□ -0.78
TMEM53-203ENST00000372242 SRRM2Q9UQ35 2752 aaKnown RBP10.15□□□□□ -0.78
TMEM53-203ENST00000372242 RPL24P83731 157 aaKnown RBP10.15□□□□□ -0.78
TMEM53-203ENST00000372242 HIST1H4GQ99525 98 aa10.15□□□□□ -0.78
TMEM53-203ENST00000372242 IGLV5-37A0A075B6J1 123 aa10.14□□□□□ -0.79
TMEM53-203ENST00000372242 RPL37AP61513 92 aaKnown RBP10.14□□□□□ -0.79
TMEM53-203ENST00000372242 NAA38Q9BRA0 125 aaKnown RBP10.14□□□□□ -0.79
TMEM53-203ENST00000372242 LOC107984156A0A0G2JMH3 177 aa10.14□□□□□ -0.79
TMEM53-203ENST00000372242 K7ERJ3 54 aa10.14□□□□□ -0.79
TMEM53-203ENST00000372242 UBE2BP63146 152 aa10.14□□□□□ -0.79
TMEM53-203ENST00000372242 ARL17AQ8IVW1 177 aa10.14□□□□□ -0.79
TMEM53-203ENST00000372242 LINC00167Q96N53 147 aa10.14□□□□□ -0.79
TMEM53-203ENST00000372242 NHP2Q9NX24 153 aaKnown RBP10.14□□□□□ -0.79
TMEM53-203ENST00000372242 RPL37AP8A6NKH3 93 aa10.13□□□□□ -0.79
TMEM53-203ENST00000372242 SCGB1A1P11684 91 aa10.13□□□□□ -0.79
TMEM53-203ENST00000372242 LINC00308Q8TCZ7 52 aa10.13□□□□□ -0.79
TMEM53-203ENST00000372242 PLA2G1BP04054 148 aaKnown RBP10.12□□□□□ -0.79
TMEM53-203ENST00000372242 KRTAP10-4P60372 401 aaPredicted RBP10.12□□□□□ -0.79
TMEM53-203ENST00000372242 F8W1H4 67 aa10.12□□□□□ -0.79
TMEM53-203ENST00000372242 NCR3O14931 201 aa10.12□□□□□ -0.79
TMEM53-203ENST00000372242 SPANXDQ9BXN6 97 aa10.12□□□□□ -0.79
TMEM53-203ENST00000372242 SPANXCQ9NY87 97 aa10.12□□□□□ -0.79
TMEM53-203ENST00000372242 PSORS1C2Q9UIG4 136 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms