RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 NDUFA12Q9UI09 145 aa9.88□□□□□ -0.83
PRPF38B-202ENST00000370022 MYMXA0A1B0GTQ4 84 aa9.88□□□□□ -0.83
PRPF38B-202ENST00000370022 TAX1BP3O14907 124 aa9.88□□□□□ -0.83
PRPF38B-202ENST00000370022 GTF2H5Q6ZYL4 71 aa9.88□□□□□ -0.83
PRPF38B-202ENST00000370022 ERG28Q9UKR5 140 aa9.88□□□□□ -0.83
PRPF38B-202ENST00000370022 DNAH8Q96JB1 4490 aa9.87□□□□□ -0.83
PRPF38B-202ENST00000370022 GAGE2EQ4V326 116 aa9.87□□□□□ -0.83
PRPF38B-202ENST00000370022 PLAC8Q9NZF1 115 aa9.87□□□□□ -0.83
PRPF38B-202ENST00000370022 GAGE2DQ9UEU5 116 aa9.87□□□□□ -0.83
PRPF38B-202ENST00000370022 A0A087WYN8 130 aa9.86□□□□□ -0.83
PRPF38B-202ENST00000370022 TSPEAR-AS2P59090 65 aa9.86□□□□□ -0.83
PRPF38B-202ENST00000370022 HAMPP81172 84 aa9.85□□□□□ -0.83
PRPF38B-202ENST00000370022 ATOH7Q8N100 152 aa9.85□□□□□ -0.83
PRPF38B-202ENST00000370022 APOBP04114 4563 aaKnown RBP9.85□□□□□ -0.83
PRPF38B-202ENST00000370022 PFN2P35080 140 aa9.84□□□□□ -0.83
PRPF38B-202ENST00000370022 SIGMAR1Q99720 223 aa9.84□□□□□ -0.83
PRPF38B-202ENST00000370022 MEIG1Q5JSS6 88 aa9.83□□□□□ -0.84
PRPF38B-202ENST00000370022 EPM2AB3EWF7 344 aa9.82□□□□□ -0.84
PRPF38B-202ENST00000370022 C9orf129Q5T035 196 aaKnown RBP9.82□□□□□ -0.84
PRPF38B-202ENST00000370022 PCLOQ9Y6V0 5065 aa9.82□□□□□ -0.84
PRPF38B-202ENST00000370022 IGKV2D-26A0A0A0MRZ7 120 aa9.81□□□□□ -0.84
PRPF38B-202ENST00000370022 LINC00158P58513 81 aa9.8□□□□□ -0.84
PRPF38B-202ENST00000370022 XAGE1AQ9HD64 81 aa9.8□□□□□ -0.84
PRPF38B-202ENST00000370022 A0A1W2PNN7 141 aa9.8□□□□□ -0.84
PRPF38B-202ENST00000370022 BVES-AS1Q5T3Y7 98 aa9.8□□□□□ -0.84
PRPF38B-202ENST00000370022 RYR1P21817 5038 aa9.79□□□□□ -0.84
PRPF38B-202ENST00000370022 GAGE10A6NGK3 116 aa9.79□□□□□ -0.84
PRPF38B-202ENST00000370022 SMIM13P0DJ93 91 aa9.79□□□□□ -0.84
PRPF38B-202ENST00000370022 Q6ZVH6 145 aa9.79□□□□□ -0.84
PRPF38B-202ENST00000370022 SND1-IT1Q9HBX3 110 aa9.79□□□□□ -0.84
PRPF38B-202ENST00000370022 ZNF815PA8K554 130 aa9.78□□□□□ -0.84
PRPF38B-202ENST00000370022 SMR3BP02814 79 aaPredicted RBP9.78□□□□□ -0.84
PRPF38B-202ENST00000370022 Q8N1X5 172 aa9.78□□□□□ -0.84
PRPF38B-202ENST00000370022 PLA2G2DQ9UNK4 145 aa9.78□□□□□ -0.84
PRPF38B-202ENST00000370022 A0A0J9YXY3 114 aa9.77□□□□□ -0.85
PRPF38B-202ENST00000370022 J3QR89 54 aa9.77□□□□□ -0.85
PRPF38B-202ENST00000370022 C7orf33Q8WU49 177 aa9.77□□□□□ -0.85
PRPF38B-202ENST00000370022 HSPG2P98160 4391 aa9.77□□□□□ -0.85
PRPF38B-202ENST00000370022 A0A0U1RRA0 63 aa9.76□□□□□ -0.85
PRPF38B-202ENST00000370022 FAM168BA1KXE4 195 aa9.76□□□□□ -0.85
PRPF38B-202ENST00000370022 FAM229AH3BQW9 127 aa9.76□□□□□ -0.85
PRPF38B-202ENST00000370022 TSPAN13O95857 204 aa9.76□□□□□ -0.85
PRPF38B-202ENST00000370022 FAM19A5Q7Z5A7 132 aaPredicted RBP9.76□□□□□ -0.85
PRPF38B-202ENST00000370022 LINC00528Q8N1L1 170 aa9.76□□□□□ -0.85
PRPF38B-202ENST00000370022 K7EP34 96 aa9.75□□□□□ -0.85
PRPF38B-202ENST00000370022 MIR7-3HGQ8N6C7 128 aa9.75□□□□□ -0.85
PRPF38B-202ENST00000370022 TIMM17BO60830 172 aa9.75□□□□□ -0.85
PRPF38B-202ENST00000370022 HSD52Q0P140 79 aa9.75□□□□□ -0.85
PRPF38B-202ENST00000370022 M0QXV9 152 aa9.74□□□□□ -0.85
PRPF38B-202ENST00000370022 SERTAD4-AS1Q5TG53 156 aa9.74□□□□□ -0.85
PRPF38B-202ENST00000370022 SLC25A34Q6PIV7 304 aa9.74□□□□□ -0.85
PRPF38B-202ENST00000370022 KRTAP7-1Q8IUC3 87 aa9.74□□□□□ -0.85
PRPF38B-202ENST00000370022 TTTY13Q9BZ97 58 aa9.74□□□□□ -0.85
PRPF38B-202ENST00000370022 RPL24P83731 157 aaKnown RBP9.73□□□□□ -0.85
PRPF38B-202ENST00000370022 TP73-AS1Q9UF72 201 aa9.73□□□□□ -0.85
PRPF38B-202ENST00000370022 IGLV5-37A0A075B6J1 123 aa9.72□□□□□ -0.85
PRPF38B-202ENST00000370022 A6NDN8 102 aa9.72□□□□□ -0.85
PRPF38B-202ENST00000370022 C9orf118A6NHY6 69 aa9.72□□□□□ -0.85
PRPF38B-202ENST00000370022 PLA2G1BP04054 148 aaKnown RBP9.72□□□□□ -0.85
PRPF38B-202ENST00000370022 SCGB1D4Q6XE38 83 aa9.72□□□□□ -0.85
PRPF38B-202ENST00000370022 PCP2Q8IVA1 136 aa9.72□□□□□ -0.85
PRPF38B-202ENST00000370022 LOC107984156A0A0G2JMH3 177 aa9.71□□□□□ -0.85
PRPF38B-202ENST00000370022 Q5VSD8 79 aa9.71□□□□□ -0.85
PRPF38B-202ENST00000370022 PHF5AQ7RTV0 110 aaKnown RBP9.71□□□□□ -0.85
PRPF38B-202ENST00000370022 ARL17AQ8IVW1 177 aa9.71□□□□□ -0.85
PRPF38B-202ENST00000370022 C22orf24Q9Y442 160 aa9.71□□□□□ -0.85
PRPF38B-202ENST00000370022 NKAPP1Q8N9T2 125 aa9.71□□□□□ -0.86
PRPF38B-202ENST00000370022 MRPL55Q7Z7F7 128 aaKnown RBP9.7□□□□□ -0.86
PRPF38B-202ENST00000370022 DAND5Q8N907 189 aa9.7□□□□□ -0.86
PRPF38B-202ENST00000370022 LITAFQ99732 161 aa9.7□□□□□ -0.86
PRPF38B-202ENST00000370022 ABCA13Q86UQ4 5058 aa9.7□□□□□ -0.86
PRPF38B-202ENST00000370022 VPREB1P12018 145 aa9.69□□□□□ -0.86
PRPF38B-202ENST00000370022 RPL37AP61513 92 aaKnown RBP9.69□□□□□ -0.86
PRPF38B-202ENST00000370022 ADAMTSL4-AS1Q5T5F5 129 aa9.69□□□□□ -0.86
PRPF38B-202ENST00000370022 BOD1L2Q8IYS8 172 aa9.68□□□□□ -0.86
PRPF38B-202ENST00000370022 UBE2BP63146 152 aa9.67□□□□□ -0.86
PRPF38B-202ENST00000370022 COX8AP10176 69 aa9.67□□□□□ -0.86
PRPF38B-202ENST00000370022 COPS9Q8WXC6 57 aa9.66□□□□□ -0.86
PRPF38B-202ENST00000370022 SPANXDQ9BXN6 97 aa9.66□□□□□ -0.86
PRPF38B-202ENST00000370022 KRTAP4-5Q9BYR2 181 aa9.66□□□□□ -0.86
PRPF38B-202ENST00000370022 SPANXCQ9NY87 97 aa9.66□□□□□ -0.86
PRPF38B-202ENST00000370022 NDUFC2O95298 119 aa9.65□□□□□ -0.86
PRPF38B-202ENST00000370022 Q8NDZ9 215 aa9.65□□□□□ -0.86
PRPF38B-202ENST00000370022 LINC00308Q8TCZ7 52 aa9.65□□□□□ -0.86
PRPF38B-202ENST00000370022 LINC00167Q96N53 147 aa9.65□□□□□ -0.86
PRPF38B-202ENST00000370022 PRR3P79522 188 aaKnown RBP9.64□□□□□ -0.87
PRPF38B-202ENST00000370022 PPDPFQ9H3Y8 114 aa9.64□□□□□ -0.87
PRPF38B-202ENST00000370022 M0R378 163 aa9.63□□□□□ -0.87
PRPF38B-202ENST00000370022 IFITM1P13164 125 aa9.63□□□□□ -0.87
PRPF38B-202ENST00000370022 KRTAP10-4P60372 401 aaPredicted RBP9.63□□□□□ -0.87
PRPF38B-202ENST00000370022 FAT1Q14517 4588 aa9.63□□□□□ -0.87
PRPF38B-202ENST00000370022 SOSTDC1Q6X4U4 206 aa9.63□□□□□ -0.87
PRPF38B-202ENST00000370022 PSORS1C2Q9UIG4 136 aa9.63□□□□□ -0.87
PRPF38B-202ENST00000370022 NPC2P61916 151 aa9.63□□□□□ -0.87
PRPF38B-202ENST00000370022 TRBV10-2A0A0K0K1G8 114 aa9.62□□□□□ -0.87
PRPF38B-202ENST00000370022 SPANXB1Q9NS25 103 aaPredicted RBP9.62□□□□□ -0.87
PRPF38B-202ENST00000370022 A0A1W2PPM0 123 aa9.61□□□□□ -0.87
PRPF38B-202ENST00000370022 F8W1H4 67 aa9.61□□□□□ -0.87
PRPF38B-202ENST00000370022 FABP2P12104 132 aa9.61□□□□□ -0.87
PRPF38B-202ENST00000370022 KRTAP11-1Q8IUC1 163 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms