RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 ODF3L2Q3SX64 289 aa4.81□□□□□ -1.64
CSDE1-204ENST00000369530 STHQ8IWL8 128 aa4.81□□□□□ -1.64
CSDE1-204ENST00000369530 RPL39LQ96EH5 51 aaKnown RBP4.81□□□□□ -1.64
CSDE1-204ENST00000369530 KIAA1109Q2LD37 5005 aa4.81□□□□□ -1.64
CSDE1-204ENST00000369530 VCYO14598 125 aa4.81□□□□□ -1.64
CSDE1-204ENST00000369530 K7EQG2 157 aa4.81□□□□□ -1.64
CSDE1-204ENST00000369530 PRM2P04554 102 aa4.81□□□□□ -1.64
CSDE1-204ENST00000369530 LINC00612Q8N6U2 182 aa4.81□□□□□ -1.64
CSDE1-204ENST00000369530 BRK1Q8WUW1 75 aa4.81□□□□□ -1.64
CSDE1-204ENST00000369530 FAM104AQ969W3 186 aa4.8□□□□□ -1.64
CSDE1-204ENST00000369530 NOTCH1P46531 2555 aa4.8□□□□□ -1.64
CSDE1-204ENST00000369530 LINC00167Q96N53 147 aa4.8□□□□□ -1.64
CSDE1-204ENST00000369530 IGHV1OR15-1A0A075B7D0 117 aa4.8□□□□□ -1.64
CSDE1-204ENST00000369530 A0A087WVE0 104 aa4.8□□□□□ -1.64
CSDE1-204ENST00000369530 NDUFA1O15239 70 aa4.8□□□□□ -1.64
CSDE1-204ENST00000369530 IGLV5-45A0A087WSX0 123 aa4.79□□□□□ -1.64
CSDE1-204ENST00000369530 A0A1B0GVY2 172 aa4.79□□□□□ -1.64
CSDE1-204ENST00000369530 C4orf48Q5BLP8 95 aa4.79□□□□□ -1.64
CSDE1-204ENST00000369530 DNAL4O96015 105 aa4.78□□□□□ -1.64
CSDE1-204ENST00000369530 FAM19A3Q7Z5A8 133 aa4.78□□□□□ -1.64
CSDE1-204ENST00000369530 FAM218AQ96MZ4 157 aa4.78□□□□□ -1.64
CSDE1-204ENST00000369530 C11orf68Q9H3H3 251 aaKnown RBP4.78□□□□□ -1.64
CSDE1-204ENST00000369530 C20orf197Q8N268 126 aa4.78□□□□□ -1.64
CSDE1-204ENST00000369530 LINC00474Q9P2X8 69 aa4.78□□□□□ -1.64
CSDE1-204ENST00000369530 IGLV4-3A0A075B6K6 122 aa4.78□□□□□ -1.64
CSDE1-204ENST00000369530 IGHV3-16A0A0C4DH30 117 aa4.78□□□□□ -1.64
CSDE1-204ENST00000369530 IGHV3-53P01767 116 aa4.78□□□□□ -1.64
CSDE1-204ENST00000369530 Q1T7F1 81 aa4.78□□□□□ -1.64
CSDE1-204ENST00000369530 IGKV3D-7A0A0C4DH55 119 aa4.77□□□□□ -1.65
CSDE1-204ENST00000369530 TRBV7-4A0A0J9YYF1 115 aa4.77□□□□□ -1.65
CSDE1-204ENST00000369530 RNASE3P12724 160 aaKnown RBP4.77□□□□□ -1.65
CSDE1-204ENST00000369530 LINC00308Q8TCZ7 52 aa4.77□□□□□ -1.65
CSDE1-204ENST00000369530 LINC00467Q9BRT7 94 aa4.77□□□□□ -1.65
CSDE1-204ENST00000369530 MAP6D1Q9H9H5 199 aa4.77□□□□□ -1.65
CSDE1-204ENST00000369530 NDUFA12Q9UI09 145 aa4.77□□□□□ -1.65
CSDE1-204ENST00000369530 RPL39P62891 51 aaKnown RBP4.77□□□□□ -1.65
CSDE1-204ENST00000369530 SS18Q15532 418 aa4.77□□□□□ -1.65
CSDE1-204ENST00000369530 Q8NAQ8 132 aa4.77□□□□□ -1.65
CSDE1-204ENST00000369530 C20orf203Q8NBC4 194 aa4.77□□□□□ -1.65
CSDE1-204ENST00000369530 X6R8D5 127 aa4.77□□□□□ -1.65
CSDE1-204ENST00000369530 IGHV4-30-4P0DP06 118 aa4.76□□□□□ -1.65
CSDE1-204ENST00000369530 STAB2Q8WWQ8 2551 aa4.76□□□□□ -1.65
CSDE1-204ENST00000369530 TRGV1A0A0A0MS02 117 aa4.76□□□□□ -1.65
CSDE1-204ENST00000369530 A0A0U1RQV1 116 aa4.76□□□□□ -1.65
CSDE1-204ENST00000369530 KLLNB2CW77 178 aa4.76□□□□□ -1.65
CSDE1-204ENST00000369530 INSP01308 110 aa4.76□□□□□ -1.65
CSDE1-204ENST00000369530 WFDC10AQ9H1F0 79 aa4.76□□□□□ -1.65
CSDE1-204ENST00000369530 IGLV5-39A0A0G2JS06 123 aa4.75□□□□□ -1.65
CSDE1-204ENST00000369530 CASC10Q5T4H9 136 aa4.75□□□□□ -1.65
CSDE1-204ENST00000369530 ZNF625Q96I27 306 aaPredicted RBP4.75□□□□□ -1.65
CSDE1-204ENST00000369530 SUMO4Q6EEV6 95 aa4.75□□□□□ -1.65
CSDE1-204ENST00000369530 TRGV2A0A075B6R0 118 aa4.74□□□□□ -1.65
CSDE1-204ENST00000369530 A0A0J9YXV3 536 aa4.74□□□□□ -1.65
CSDE1-204ENST00000369530 MIFP14174 115 aa4.74□□□□□ -1.65
CSDE1-204ENST00000369530 C9orf129Q5T035 196 aaKnown RBP4.74□□□□□ -1.65
CSDE1-204ENST00000369530 DGAT2L7PQ6IED9 249 aa4.74□□□□□ -1.65
CSDE1-204ENST00000369530 IGHV3-38A0A0C4DH36 116 aa4.74□□□□□ -1.65
CSDE1-204ENST00000369530 H0YGX0 51 aa4.74□□□□□ -1.65
CSDE1-204ENST00000369530 F8WEM9 126 aa4.74□□□□□ -1.65
CSDE1-204ENST00000369530 PAX4O43316 350 aa4.74□□□□□ -1.65
CSDE1-204ENST00000369530 FAM229BQ4G0N7 80 aa4.74□□□□□ -1.65
CSDE1-204ENST00000369530 ESRGQ1W209 222 aa4.73□□□□□ -1.65
CSDE1-204ENST00000369530 OPRPNQ99935 248 aaPredicted RBP4.73□□□□□ -1.65
CSDE1-204ENST00000369530 SOSTDC1Q6X4U4 206 aa4.73□□□□□ -1.65
CSDE1-204ENST00000369530 Q6ZTC4 211 aa4.73□□□□□ -1.65
CSDE1-204ENST00000369530 MUC4Q99102 2169 aa4.72□□□□□ -1.65
CSDE1-204ENST00000369530 CXCL6P80162 114 aa4.72□□□□□ -1.65
CSDE1-204ENST00000369530 C14orf132Q9NPU4 83 aa4.72□□□□□ -1.65
CSDE1-204ENST00000369530 IGHV3-64A0A075B6Q5 118 aa4.71□□□□□ -1.65
CSDE1-204ENST00000369530 JMJD7-PLA2G4BH0Y9G9 81 aa4.71□□□□□ -1.65
CSDE1-204ENST00000369530 M0QY20 66 aa4.71□□□□□ -1.65
CSDE1-204ENST00000369530 DEFB130BP0DP73 79 aa4.71□□□□□ -1.65
CSDE1-204ENST00000369530 DEFB130AP0DP74 79 aa4.71□□□□□ -1.65
CSDE1-204ENST00000369530 RNASE13Q5GAN3 156 aaKnown RBP4.71□□□□□ -1.65
CSDE1-204ENST00000369530 C6orf223Q8N319 242 aa4.71□□□□□ -1.65
CSDE1-204ENST00000369530 NOP10Q9NPE3 64 aaKnown RBP4.71□□□□□ -1.65
CSDE1-204ENST00000369530 TRAV23DV6A0A075B6W5 121 aa4.71□□□□□ -1.66
CSDE1-204ENST00000369530 PRB2P02812 416 aaPredicted RBP4.71□□□□□ -1.66
CSDE1-204ENST00000369530 CIRBPQ14011 172 aaKnown RBP4.71□□□□□ -1.66
CSDE1-204ENST00000369530 IGKV3OR2-268A0A0C4DH90 116 aa4.71□□□□□ -1.66
CSDE1-204ENST00000369530 C3orf84H3BNL1 204 aa4.71□□□□□ -1.66
CSDE1-204ENST00000369530 RBM3P98179 157 aaKnown RBP4.71□□□□□ -1.66
CSDE1-204ENST00000369530 RMI2Q96E14 147 aa4.7□□□□□ -1.66
CSDE1-204ENST00000369530 WWC2-AS2Q96NR7 200 aa4.7□□□□□ -1.66
CSDE1-204ENST00000369530 LOC110117498A0A087WWA1 95 aa4.7□□□□□ -1.66
CSDE1-204ENST00000369530 TRGV4A0A0C4DH28 118 aa4.7□□□□□ -1.66
CSDE1-204ENST00000369530 LCE6AA0A183 80 aa4.7□□□□□ -1.66
CSDE1-204ENST00000369530 KTN1-AS1Q86SY8 53 aa4.7□□□□□ -1.66
CSDE1-204ENST00000369530 Q6ZTI0 123 aa4.69□□□□□ -1.66
CSDE1-204ENST00000369530 LYRM9A8MSI8 78 aa4.69□□□□□ -1.66
CSDE1-204ENST00000369530 HTN3P15516 51 aa4.69□□□□□ -1.66
CSDE1-204ENST00000369530 CMC4P56277 68 aaPredicted RBP4.69□□□□□ -1.66
CSDE1-204ENST00000369530 hDV103S1A0JD37 113 aa4.68□□□□□ -1.66
CSDE1-204ENST00000369530 IGKV2-29A2NJV5 120 aaPredicted RBP4.68□□□□□ -1.66
CSDE1-204ENST00000369530 DEFB4AO15263 64 aa4.68□□□□□ -1.66
CSDE1-204ENST00000369530 ENHOQ6UWT2 76 aa4.68□□□□□ -1.66
CSDE1-204ENST00000369530 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.68□□□□□ -1.66
CSDE1-204ENST00000369530 A0A087WYN8 130 aa4.68□□□□□ -1.66
CSDE1-204ENST00000369530 PHF5AQ7RTV0 110 aaKnown RBP4.68□□□□□ -1.66
CSDE1-204ENST00000369530 Q9UF83 564 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms