RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 J3QL48 77 aa12.31□□□□□ -0.44
SNX27-203ENST00000368843 Q6ZRP5 223 aa12.31□□□□□ -0.44
SNX27-203ENST00000368843 IGLV5-39A0A0G2JS06 123 aa12.31□□□□□ -0.44
SNX27-203ENST00000368843 FAM19A4Q96LR4 140 aa12.31□□□□□ -0.44
SNX27-203ENST00000368843 NCOR2Q9Y618 2525 aa12.3□□□□□ -0.44
SNX27-203ENST00000368843 H3BNG1 76 aa12.3□□□□□ -0.44
SNX27-203ENST00000368843 LINC00588Q9Y4M8 146 aa12.3□□□□□ -0.44
SNX27-203ENST00000368843 A0A1B0GU69 56 aa12.29□□□□□ -0.44
SNX27-203ENST00000368843 LINC00313P59037 77 aa12.29□□□□□ -0.44
SNX27-203ENST00000368843 EPM2AB3EWF7 344 aa12.28□□□□□ -0.44
SNX27-203ENST00000368843 LRRK2Q5S007 2527 aa12.27□□□□□ -0.44
SNX27-203ENST00000368843 WWC2-AS2Q96NR7 200 aa12.26□□□□□ -0.45
SNX27-203ENST00000368843 Q8NBF4 154 aa12.26□□□□□ -0.45
SNX27-203ENST00000368843 EP400Q96L91 3159 aa12.25□□□□□ -0.45
SNX27-203ENST00000368843 MYO18BQ8IUG5 2567 aa12.25□□□□□ -0.45
SNX27-203ENST00000368843 SERTAD4-AS1Q5TG53 156 aa12.25□□□□□ -0.45
SNX27-203ENST00000368843 ACYP2P14621 99 aa12.24□□□□□ -0.45
SNX27-203ENST00000368843 LINC00476Q8WZB0 136 aa12.24□□□□□ -0.45
SNX27-203ENST00000368843 ELOF1P60002 83 aaKnown RBP12.24□□□□□ -0.45
SNX27-203ENST00000368843 Q96NJ1 140 aa12.24□□□□□ -0.45
SNX27-203ENST00000368843 TP53AIP1Q9HCN2 124 aa12.24□□□□□ -0.45
SNX27-203ENST00000368843 Q8NAQ8 132 aa12.24□□□□□ -0.45
SNX27-203ENST00000368843 ST20-AS1Q8NBB2 130 aa12.24□□□□□ -0.45
SNX27-203ENST00000368843 LINC01546A6NGU7 62 aa12.23□□□□□ -0.45
SNX27-203ENST00000368843 FAM218AQ96MZ4 157 aa12.22□□□□□ -0.45
SNX27-203ENST00000368843 C4orf26Q17RF5 130 aa12.22□□□□□ -0.45
SNX27-203ENST00000368843 C2CD3Q4AC94 2353 aa12.22□□□□□ -0.45
SNX27-203ENST00000368843 Q6ZRX8 168 aa12.21□□□□□ -0.45
SNX27-203ENST00000368843 PCSK5Q92824 1860 aa12.2□□□□□ -0.46
SNX27-203ENST00000368843 ATP11AUNQ6ZP68 121 aa12.19□□□□□ -0.46
SNX27-203ENST00000368843 BCE1O60756 84 aa12.17□□□□□ -0.46
SNX27-203ENST00000368843 CDIP1Q9H305 208 aa12.17□□□□□ -0.46
SNX27-203ENST00000368843 FAM168BA1KXE4 195 aa12.17□□□□□ -0.46
SNX27-203ENST00000368843 DOPEY1Q5JWR5 2465 aa12.16□□□□□ -0.46
SNX27-203ENST00000368843 SPINT4Q6UDR6 99 aa12.15□□□□□ -0.46
SNX27-203ENST00000368843 GVQW2A0A096LPI5 108 aaPredicted RBP12.14□□□□□ -0.47
SNX27-203ENST00000368843 IGLV5-45A0A087WSX0 123 aa12.13□□□□□ -0.47
SNX27-203ENST00000368843 Q6ZQT0 140 aa12.1□□□□□ -0.47
SNX27-203ENST00000368843 COX6B2Q6YFQ2 88 aa12.1□□□□□ -0.47
SNX27-203ENST00000368843 DNAH10OSP0CZ25 163 aa12.09□□□□□ -0.47
SNX27-203ENST00000368843 WDR87Q6ZQQ6 2873 aa12.08□□□□□ -0.48
SNX27-203ENST00000368843 KRTAP10-11P60412 298 aa12.08□□□□□ -0.48
SNX27-203ENST00000368843 PIEZO1Q92508 2521 aa12.07□□□□□ -0.48
SNX27-203ENST00000368843 SMCPP49901 116 aaPredicted RBP12.06□□□□□ -0.48
SNX27-203ENST00000368843 TM2D3Q9BRN9 247 aa12.06□□□□□ -0.48
SNX27-203ENST00000368843 C9orf92A6NGG3 77 aa12.04□□□□□ -0.48
SNX27-203ENST00000368843 TRAV22A0A0B4J277 110 aa12.04□□□□□ -0.48
SNX27-203ENST00000368843 ZFYVE26Q68DK2 2539 aa12.03□□□□□ -0.48
SNX27-203ENST00000368843 JMJD1CQ15652 2540 aa12.03□□□□□ -0.48
SNX27-203ENST00000368843 LOC110117498A0A087WWA1 95 aa12.03□□□□□ -0.48
SNX27-203ENST00000368843 K7EIL1 84 aa12.03□□□□□ -0.48
SNX27-203ENST00000368843 A0A1B0GW54 56 aa12.03□□□□□ -0.48
SNX27-203ENST00000368843 FN1P02751 2386 aaKnown RBP12.02□□□□□ -0.48
SNX27-203ENST00000368843 SSBP3-AS1Q7Z2R9 100 aa12.02□□□□□ -0.49
SNX27-203ENST00000368843 APLNQ9ULZ1 77 aa12□□□□□ -0.49
SNX27-203ENST00000368843 ABCA12Q86UK0 2595 aa12□□□□□ -0.49
SNX27-203ENST00000368843 A0A0G2JQZ4 141 aa11.98□□□□□ -0.49
SNX27-203ENST00000368843 A0A1W2PNN7 141 aa11.98□□□□□ -0.49
SNX27-203ENST00000368843 SMR3BP02814 79 aaPredicted RBP11.98□□□□□ -0.49
SNX27-203ENST00000368843 MYO9AB2RTY4 2548 aa11.97□□□□□ -0.49
SNX27-203ENST00000368843 VPREB1P12018 145 aa11.97□□□□□ -0.49
SNX27-203ENST00000368843 C8orf87E5RJ46 101 aa11.96□□□□□ -0.49
SNX27-203ENST00000368843 H3BPC8 53 aa11.96□□□□□ -0.49
SNX27-203ENST00000368843 DSCR10P59022 87 aa11.96□□□□□ -0.49
SNX27-203ENST00000368843 A8MWP4 228 aa11.95□□□□□ -0.5
SNX27-203ENST00000368843 LINC00304Q8N9R0 145 aa11.95□□□□□ -0.5
SNX27-203ENST00000368843 TLN1Q9Y490 2541 aaKnown RBP11.95□□□□□ -0.5
SNX27-203ENST00000368843 IGLV6-57P01721 117 aa11.94□□□□□ -0.5
SNX27-203ENST00000368843 IGLV1-50A0A075B6I6 118 aa11.94□□□□□ -0.5
SNX27-203ENST00000368843 TRBV7-4A0A0J9YYF1 115 aa11.94□□□□□ -0.5
SNX27-203ENST00000368843 K7EQZ3 153 aa11.93□□□□□ -0.5
SNX27-203ENST00000368843 MRPL34Q9BQ48 92 aaKnown RBP11.93□□□□□ -0.5
SNX27-203ENST00000368843 GOLGB1Q14789 3259 aaKnown RBP11.92□□□□□ -0.5
SNX27-203ENST00000368843 CSNK1G2-AS1Q8NCQ2 148 aa11.92□□□□□ -0.5
SNX27-203ENST00000368843 LOC101927531A0A1B0GV80 90 aa11.9□□□□□ -0.5
SNX27-203ENST00000368843 PRO0628Q9UI54 55 aa11.9□□□□□ -0.5
SNX27-203ENST00000368843 OBSCN-AS1Q96MR7 158 aa11.9□□□□□ -0.5
SNX27-203ENST00000368843 KRTAP10-3P60369 221 aa11.9□□□□□ -0.5
SNX27-203ENST00000368843 ANAPC11Q9NYG5 84 aa11.89□□□□□ -0.51
SNX27-203ENST00000368843 C19orf73Q9NVV2 129 aa11.86□□□□□ -0.51
SNX27-203ENST00000368843 A0A087WTM6 91 aa11.85□□□□□ -0.51
SNX27-203ENST00000368843 C15orf56Q8N910 161 aa11.85□□□□□ -0.51
SNX27-203ENST00000368843 TLN2Q9Y4G6 2542 aa11.84□□□□□ -0.51
SNX27-203ENST00000368843 LINC01600Q96MT4 127 aa11.84□□□□□ -0.51
SNX27-203ENST00000368843 ZNF861PO60384 105 aa11.84□□□□□ -0.51
SNX27-203ENST00000368843 IGFL1Q6UW32 110 aa11.84□□□□□ -0.51
SNX27-203ENST00000368843 KCNQ1DNQ9H478 68 aa11.83□□□□□ -0.51
SNX27-203ENST00000368843 COA5Q86WW8 74 aa11.83□□□□□ -0.52
SNX27-203ENST00000368843 ANKRD17O75179 2603 aaKnown RBP11.83□□□□□ -0.52
SNX27-203ENST00000368843 PRO0461Q9UI25 63 aa11.83□□□□□ -0.52
SNX27-203ENST00000368843 LITAFQ99732 161 aa11.82□□□□□ -0.52
SNX27-203ENST00000368843 A8MUN3 132 aa11.81□□□□□ -0.52
SNX27-203ENST00000368843 LINC01554Q52M75 96 aa11.81□□□□□ -0.52
SNX27-203ENST00000368843 C9orf129Q5T035 196 aaKnown RBP11.79□□□□□ -0.52
SNX27-203ENST00000368843 C8orf17Q9NRJ1 99 aa11.77□□□□□ -0.52
SNX27-203ENST00000368843 A0A0D9SG42 100 aa11.77□□□□□ -0.53
SNX27-203ENST00000368843 KLK9Q2XQG4 91 aa11.77□□□□□ -0.53
SNX27-203ENST00000368843 ANKRD11Q6UB99 2663 aaPredicted RBP11.77□□□□□ -0.53
SNX27-203ENST00000368843 CENPFP49454 3210 aa11.77□□□□□ -0.53
SNX27-203ENST00000368843 IGLV5-37A0A075B6J1 123 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms