RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 FLNBO75369 2602 aaKnown RBP6.17□□□□□ -1.42
SYNE1-206ENST00000367253 ADAMTS20P59510 1910 aa6.17□□□□□ -1.42
SYNE1-206ENST00000367253 LINC00310P59036 64 aa6.16□□□□□ -1.42
SYNE1-206ENST00000367253 TANC2Q9HCD6 1990 aa6.16□□□□□ -1.42
SYNE1-206ENST00000367253 C5orf42Q9H799 3197 aa6.16□□□□□ -1.42
SYNE1-206ENST00000367253 LUZP6Q538Z0 58 aa6.16□□□□□ -1.42
SYNE1-206ENST00000367253 LINC00574Q9H8X3 128 aa6.16□□□□□ -1.42
SYNE1-206ENST00000367253 EPG5Q9HCE0 2579 aa6.16□□□□□ -1.42
SYNE1-206ENST00000367253 H0Y9P7 68 aa6.15□□□□□ -1.42
SYNE1-206ENST00000367253 COX17Q14061 63 aa6.15□□□□□ -1.42
SYNE1-206ENST00000367253 RTL8CO15255 209 aa6.15□□□□□ -1.42
SYNE1-206ENST00000367253 ERC2-IT1O76042 136 aa6.15□□□□□ -1.42
SYNE1-206ENST00000367253 X6R8D5 127 aa6.15□□□□□ -1.42
SYNE1-206ENST00000367253 IGLV5-45A0A087WSX0 123 aa6.15□□□□□ -1.42
SYNE1-206ENST00000367253 PRO0461Q9UI25 63 aa6.15□□□□□ -1.43
SYNE1-206ENST00000367253 Q8N814 137 aa6.14□□□□□ -1.43
SYNE1-206ENST00000367253 POLQO75417 2590 aa6.14□□□□□ -1.43
SYNE1-206ENST00000367253 LOC101927531A0A1B0GV80 90 aa6.14□□□□□ -1.43
SYNE1-206ENST00000367253 H3BNG1 76 aa6.14□□□□□ -1.43
SYNE1-206ENST00000367253 TSHBP01222 138 aa6.13□□□□□ -1.43
SYNE1-206ENST00000367253 CRIP1P50238 77 aa6.13□□□□□ -1.43
SYNE1-206ENST00000367253 C10orf99Q6UWK7 81 aa6.13□□□□□ -1.43
SYNE1-206ENST00000367253 PRAC1Q96KF2 57 aa6.13□□□□□ -1.43
SYNE1-206ENST00000367253 LOC100131303A0A0U1RQF7 123 aa6.12□□□□□ -1.43
SYNE1-206ENST00000367253 COX6A2Q02221 97 aa6.12□□□□□ -1.43
SYNE1-206ENST00000367253 SPINK1P00995 79 aa6.12□□□□□ -1.43
SYNE1-206ENST00000367253 LAMA2P24043 3122 aaKnown RBP6.12□□□□□ -1.43
SYNE1-206ENST00000367253 BCE1O60756 84 aa6.12□□□□□ -1.43
SYNE1-206ENST00000367253 POLR2KP53803 58 aaKnown RBP6.12□□□□□ -1.43
SYNE1-206ENST00000367253 LYPD5Q6UWN5 251 aa6.12□□□□□ -1.43
SYNE1-206ENST00000367253 ODF3L2Q3SX64 289 aa6.12□□□□□ -1.43
SYNE1-206ENST00000367253 ACYP2P14621 99 aa6.11□□□□□ -1.43
SYNE1-206ENST00000367253 KIF25-AS1Q9Y6Z4 181 aa6.11□□□□□ -1.43
SYNE1-206ENST00000367253 ZNF292O60281 2723 aa6.11□□□□□ -1.43
SYNE1-206ENST00000367253 TSPEAR-AS2P59090 65 aa6.11□□□□□ -1.43
SYNE1-206ENST00000367253 Q8IZM0 81 aa6.11□□□□□ -1.43
SYNE1-206ENST00000367253 Q9BRP9 147 aa6.11□□□□□ -1.43
SYNE1-206ENST00000367253 TLN2Q9Y4G6 2542 aa6.11□□□□□ -1.43
SYNE1-206ENST00000367253 USP9YO00507 2555 aaPredicted RBP6.1□□□□□ -1.43
SYNE1-206ENST00000367253 IGLV8-61A0A075B6I0 122 aa6.1□□□□□ -1.43
SYNE1-206ENST00000367253 LINC00959A0A1B0GUT2 108 aa6.1□□□□□ -1.43
SYNE1-206ENST00000367253 LINC00575Q6W349 94 aa6.1□□□□□ -1.43
SYNE1-206ENST00000367253 PTPRBP23467 1997 aa6.1□□□□□ -1.43
SYNE1-206ENST00000367253 CPAMD8Q8IZJ3 1885 aa6.1□□□□□ -1.43
SYNE1-206ENST00000367253 MSMPQ1L6U9 139 aa6.1□□□□□ -1.43
SYNE1-206ENST00000367253 C18orf65Q6ZTR6 163 aa6.1□□□□□ -1.43
SYNE1-206ENST00000367253 SPACA4Q8TDM5 124 aa6.1□□□□□ -1.43
SYNE1-206ENST00000367253 RPL37AP8A6NKH3 93 aa6.09□□□□□ -1.43
SYNE1-206ENST00000367253 BRWD1-AS2P59051 145 aa6.09□□□□□ -1.43
SYNE1-206ENST00000367253 ADAMTSL4-AS1Q5T5F5 129 aa6.09□□□□□ -1.43
SYNE1-206ENST00000367253 A0A087WYN8 130 aa6.09□□□□□ -1.43
SYNE1-206ENST00000367253 M0R2T5 61 aa6.09□□□□□ -1.43
SYNE1-206ENST00000367253 IGHV6-1A0A0B4J1U7 121 aa6.09□□□□□ -1.44
SYNE1-206ENST00000367253 PLA2G2DQ9UNK4 145 aa6.09□□□□□ -1.44
SYNE1-206ENST00000367253 Q5XG85 94 aa6.08□□□□□ -1.44
SYNE1-206ENST00000367253 C1orf64Q8NEQ6 169 aa6.08□□□□□ -1.44
SYNE1-206ENST00000367253 IGIPA6NJ69 53 aa6.08□□□□□ -1.44
SYNE1-206ENST00000367253 PRRC2CQ9Y520 2896 aaKnown RBP6.08□□□□□ -1.44
SYNE1-206ENST00000367253 PRR3P79522 188 aaKnown RBP6.07□□□□□ -1.44
SYNE1-206ENST00000367253 CRIP3Q6Q6R5 217 aa6.07□□□□□ -1.44
SYNE1-206ENST00000367253 H7BZZ5 65 aa6.07□□□□□ -1.44
SYNE1-206ENST00000367253 LINC00315P59091 139 aa6.07□□□□□ -1.44
SYNE1-206ENST00000367253 MIR22HGQ0VDD5 57 aa6.07□□□□□ -1.44
SYNE1-206ENST00000367253 PRUNE2Q8WUY3 3088 aa6.06□□□□□ -1.44
SYNE1-206ENST00000367253 CYSRT1A8MQ03 144 aa6.06□□□□□ -1.44
SYNE1-206ENST00000367253 CNFNQ9BYD5 112 aa6.06□□□□□ -1.44
SYNE1-206ENST00000367253 DEFB116Q30KQ4 102 aa6.05□□□□□ -1.44
SYNE1-206ENST00000367253 LINC00242Q5T6M2 205 aa6.05□□□□□ -1.44
SYNE1-206ENST00000367253 CDC42SE2Q9NRR3 84 aa6.05□□□□□ -1.44
SYNE1-206ENST00000367253 A0A087WSZ3 146 aa6.05□□□□□ -1.44
SYNE1-206ENST00000367253 CDC42SE1Q9NRR8 79 aa6.05□□□□□ -1.44
SYNE1-206ENST00000367253 SMIM1B2RUZ4 78 aa6.04□□□□□ -1.44
SYNE1-206ENST00000367253 UQCR11O14957 56 aa6.04□□□□□ -1.44
SYNE1-206ENST00000367253 SEC61BP60468 96 aaKnown RBP6.04□□□□□ -1.44
SYNE1-206ENST00000367253 URB1-AS1Q96HZ7 61 aa6.04□□□□□ -1.44
SYNE1-206ENST00000367253 GAS8-AS1O95177 125 aa6.04□□□□□ -1.44
SYNE1-206ENST00000367253 KLKP1Q107X0 134 aa6.04□□□□□ -1.44
SYNE1-206ENST00000367253 CRIPTQ9P021 101 aa6.03□□□□□ -1.44
SYNE1-206ENST00000367253 TRIOO75962 3097 aa6.03□□□□□ -1.44
SYNE1-206ENST00000367253 LINC00313P59037 77 aa6.03□□□□□ -1.44
SYNE1-206ENST00000367253 LINC01600Q96MT4 127 aa6.03□□□□□ -1.44
SYNE1-206ENST00000367253 SMIM29Q86T20 159 aa6.03□□□□□ -1.44
SYNE1-206ENST00000367253 C11orf21Q9P2W6 132 aa6.03□□□□□ -1.44
SYNE1-206ENST00000367253 EIF4EBP3O60516 100 aaPredicted RBP6.02□□□□□ -1.45
SYNE1-206ENST00000367253 KLLNB2CW77 178 aa6.02□□□□□ -1.45
SYNE1-206ENST00000367253 ELOF1P60002 83 aaKnown RBP6.02□□□□□ -1.45
SYNE1-206ENST00000367253 UNQ6190/PRO20217Q6UXQ8 127 aa6.02□□□□□ -1.45
SYNE1-206ENST00000367253 K7EIL1 84 aa6.01□□□□□ -1.45
SYNE1-206ENST00000367253 A0A0C4DFX4 3053 aa6.01□□□□□ -1.45
SYNE1-206ENST00000367253 PRLHP81277 87 aa6□□□□□ -1.45
SYNE1-206ENST00000367253 H3BPC8 53 aa6□□□□□ -1.45
SYNE1-206ENST00000367253 PRR9Q5T870 116 aa6□□□□□ -1.45
SYNE1-206ENST00000367253 LINC00304Q8N9R0 145 aa6□□□□□ -1.45
SYNE1-206ENST00000367253 TP53AIP1Q9HCN2 124 aa6□□□□□ -1.45
SYNE1-206ENST00000367253 PCSK5Q92824 1860 aa6□□□□□ -1.45
SYNE1-206ENST00000367253 A0A1B0GUV1 79 aa5.99□□□□□ -1.45
SYNE1-206ENST00000367253 Q6ZPA2 131 aa5.99□□□□□ -1.45
SYNE1-206ENST00000367253 C9orf163Q8N9P6 203 aa5.99□□□□□ -1.45
SYNE1-206ENST00000367253 Q8NBF4 154 aa5.98□□□□□ -1.45
SYNE1-206ENST00000367253 COA5Q86WW8 74 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms