RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 LEPROTO15243 131 aa11.33□□□□□ -0.6
PDLIM7-202ENST00000355841 C9orf118A6NHY6 69 aa11.32□□□□□ -0.6
PDLIM7-202ENST00000355841 LINC00474Q9P2X8 69 aa11.32□□□□□ -0.6
PDLIM7-202ENST00000355841 HERC2O95714 4834 aa11.32□□□□□ -0.6
PDLIM7-202ENST00000355841 PFN2P35080 140 aa11.31□□□□□ -0.6
PDLIM7-202ENST00000355841 PCP2Q8IVA1 136 aa11.31□□□□□ -0.6
PDLIM7-202ENST00000355841 J3QQQ9 107 aa11.3□□□□□ -0.6
PDLIM7-202ENST00000355841 XAGE1AQ9HD64 81 aa11.3□□□□□ -0.6
PDLIM7-202ENST00000355841 NDUFA12Q9UI09 145 aa11.3□□□□□ -0.6
PDLIM7-202ENST00000355841 A0A1W2PNN7 141 aa11.3□□□□□ -0.6
PDLIM7-202ENST00000355841 FAM168BA1KXE4 195 aa11.3□□□□□ -0.6
PDLIM7-202ENST00000355841 GTF2H5Q6ZYL4 71 aa11.3□□□□□ -0.6
PDLIM7-202ENST00000355841 PLEKHB2Q96CS7 222 aa11.3□□□□□ -0.6
PDLIM7-202ENST00000355841 E9PLD3 99 aa11.29□□□□□ -0.6
PDLIM7-202ENST00000355841 C9orf129Q5T035 196 aaKnown RBP11.29□□□□□ -0.6
PDLIM7-202ENST00000355841 PLAC8Q9NZF1 115 aa11.29□□□□□ -0.6
PDLIM7-202ENST00000355841 ERG28Q9UKR5 140 aa11.29□□□□□ -0.6
PDLIM7-202ENST00000355841 FAT1Q14517 4588 aa11.29□□□□□ -0.6
PDLIM7-202ENST00000355841 IGKV2D-26A0A0A0MRZ7 120 aa11.27□□□□□ -0.6
PDLIM7-202ENST00000355841 A0A0U1RRA0 63 aa11.27□□□□□ -0.6
PDLIM7-202ENST00000355841 LGALS3P17931 250 aaKnown RBP11.27□□□□□ -0.6
PDLIM7-202ENST00000355841 TAL2Q16559 108 aa11.27□□□□□ -0.6
PDLIM7-202ENST00000355841 SFTA2Q6UW10 78 aa11.27□□□□□ -0.61
PDLIM7-202ENST00000355841 MYMXA0A1B0GTQ4 84 aa11.25□□□□□ -0.61
PDLIM7-202ENST00000355841 GAGE10A6NGK3 116 aa11.25□□□□□ -0.61
PDLIM7-202ENST00000355841 FAM19A5Q7Z5A7 132 aaPredicted RBP11.25□□□□□ -0.61
PDLIM7-202ENST00000355841 LINC00528Q8N1L1 170 aa11.25□□□□□ -0.61
PDLIM7-202ENST00000355841 TTTY13Q9BZ97 58 aa11.25□□□□□ -0.61
PDLIM7-202ENST00000355841 K7EP34 96 aa11.24□□□□□ -0.61
PDLIM7-202ENST00000355841 LINC00158P58513 81 aa11.24□□□□□ -0.61
PDLIM7-202ENST00000355841 KRTAP7-1Q8IUC3 87 aa11.24□□□□□ -0.61
PDLIM7-202ENST00000355841 Q8N1X5 172 aa11.24□□□□□ -0.61
PDLIM7-202ENST00000355841 SMIM13P0DJ93 91 aa11.24□□□□□ -0.61
PDLIM7-202ENST00000355841 MEIG1Q5JSS6 88 aa11.24□□□□□ -0.61
PDLIM7-202ENST00000355841 HERV-K104P63124 156 aa11.23□□□□□ -0.61
PDLIM7-202ENST00000355841 KRTAP4-5Q9BYR2 181 aa11.23□□□□□ -0.61
PDLIM7-202ENST00000355841 H3BUT2 72 aa11.22□□□□□ -0.61
PDLIM7-202ENST00000355841 COX17Q14061 63 aa11.22□□□□□ -0.61
PDLIM7-202ENST00000355841 SERTAD4-AS1Q5TG53 156 aa11.22□□□□□ -0.61
PDLIM7-202ENST00000355841 A0A1W2PPM0 123 aa11.21□□□□□ -0.61
PDLIM7-202ENST00000355841 OCIAD2Q56VL3 154 aa11.21□□□□□ -0.61
PDLIM7-202ENST00000355841 Q5VSD8 79 aa11.21□□□□□ -0.61
PDLIM7-202ENST00000355841 SND1-IT1Q9HBX3 110 aa11.21□□□□□ -0.61
PDLIM7-202ENST00000355841 CEND1Q8N111 149 aa11.2□□□□□ -0.62
PDLIM7-202ENST00000355841 EPM2AB3EWF7 344 aa11.2□□□□□ -0.62
PDLIM7-202ENST00000355841 PHF5AQ7RTV0 110 aaKnown RBP11.2□□□□□ -0.62
PDLIM7-202ENST00000355841 K7ERU9 68 aa11.19□□□□□ -0.62
PDLIM7-202ENST00000355841 FABP2P12104 132 aa11.19□□□□□ -0.62
PDLIM7-202ENST00000355841 FXYD2P54710 66 aa11.19□□□□□ -0.62
PDLIM7-202ENST00000355841 DAND5Q8N907 189 aa11.19□□□□□ -0.62
PDLIM7-202ENST00000355841 VPS13BQ7Z7G8 4022 aa11.18□□□□□ -0.62
PDLIM7-202ENST00000355841 ZNF815PA8K554 130 aa11.18□□□□□ -0.62
PDLIM7-202ENST00000355841 FAM229AH3BQW9 127 aa11.18□□□□□ -0.62
PDLIM7-202ENST00000355841 MIR7-3HGQ8N6C7 128 aa11.18□□□□□ -0.62
PDLIM7-202ENST00000355841 A0A0J9YXY3 114 aa11.17□□□□□ -0.62
PDLIM7-202ENST00000355841 SPCS1Q9Y6A9 102 aa11.17□□□□□ -0.62
PDLIM7-202ENST00000355841 M0QXV9 152 aa11.17□□□□□ -0.62
PDLIM7-202ENST00000355841 SRRM2Q9UQ35 2752 aaKnown RBP11.16□□□□□ -0.62
PDLIM7-202ENST00000355841 RAB37Q96AX2 223 aa11.16□□□□□ -0.62
PDLIM7-202ENST00000355841 Q8NDZ9 215 aa11.15□□□□□ -0.62
PDLIM7-202ENST00000355841 C7orf33Q8WU49 177 aa11.15□□□□□ -0.62
PDLIM7-202ENST00000355841 C22orf24Q9Y442 160 aa11.15□□□□□ -0.62
PDLIM7-202ENST00000355841 ADAMTSL4-AS1Q5T5F5 129 aa11.14□□□□□ -0.63
PDLIM7-202ENST00000355841 RPL37AP61513 92 aaKnown RBP11.14□□□□□ -0.63
PDLIM7-202ENST00000355841 KRTAP11-1Q8IUC1 163 aa11.14□□□□□ -0.63
PDLIM7-202ENST00000355841 A0A1B0GWB2 263 aa11.13□□□□□ -0.63
PDLIM7-202ENST00000355841 HIST1H4GQ99525 98 aa11.13□□□□□ -0.63
PDLIM7-202ENST00000355841 NHP2Q9NX24 153 aaKnown RBP11.13□□□□□ -0.63
PDLIM7-202ENST00000355841 KRTAP10-4P60372 401 aaPredicted RBP11.12□□□□□ -0.63
PDLIM7-202ENST00000355841 PCP4P48539 62 aa11.11□□□□□ -0.63
PDLIM7-202ENST00000355841 NPC2P61916 151 aa11.11□□□□□ -0.63
PDLIM7-202ENST00000355841 NAA38Q9BRA0 125 aaKnown RBP11.11□□□□□ -0.63
PDLIM7-202ENST00000355841 PLA2G2DQ9UNK4 145 aa11.11□□□□□ -0.63
PDLIM7-202ENST00000355841 ABCA13Q86UQ4 5058 aa11.11□□□□□ -0.63
PDLIM7-202ENST00000355841 PLA2G1BP04054 148 aaKnown RBP11.11□□□□□ -0.63
PDLIM7-202ENST00000355841 LITAFQ99732 161 aa11.11□□□□□ -0.63
PDLIM7-202ENST00000355841 EIF4EBP3O60516 100 aaPredicted RBP11.1□□□□□ -0.63
PDLIM7-202ENST00000355841 VPREB1P12018 145 aa11.1□□□□□ -0.63
PDLIM7-202ENST00000355841 SCGB1D4Q6XE38 83 aa11.1□□□□□ -0.63
PDLIM7-202ENST00000355841 TMEM238LA0A1B0GVL6 79 aa11.09□□□□□ -0.63
PDLIM7-202ENST00000355841 A6NJY4 79 aa11.09□□□□□ -0.63
PDLIM7-202ENST00000355841 K7ERJ3 54 aa11.09□□□□□ -0.63
PDLIM7-202ENST00000355841 UBE2BP63146 152 aa11.09□□□□□ -0.63
PDLIM7-202ENST00000355841 PRR3P79522 188 aaKnown RBP11.09□□□□□ -0.63
PDLIM7-202ENST00000355841 MRPL55Q7Z7F7 128 aaKnown RBP11.09□□□□□ -0.63
PDLIM7-202ENST00000355841 NKAPP1Q8N9T2 125 aa11.09□□□□□ -0.63
PDLIM7-202ENST00000355841 VPS25Q9BRG1 176 aa11.09□□□□□ -0.63
PDLIM7-202ENST00000355841 IGLV5-37A0A075B6J1 123 aa11.08□□□□□ -0.64
PDLIM7-202ENST00000355841 RPL37AP8A6NKH3 93 aa11.08□□□□□ -0.64
PDLIM7-202ENST00000355841 LINC00167Q96N53 147 aa11.08□□□□□ -0.64
PDLIM7-202ENST00000355841 PSORS1C2Q9UIG4 136 aa11.08□□□□□ -0.64
PDLIM7-202ENST00000355841 RPL24P83731 157 aaKnown RBP11.07□□□□□ -0.64
PDLIM7-202ENST00000355841 SOSTDC1Q6X4U4 206 aa11.07□□□□□ -0.64
PDLIM7-202ENST00000355841 TIMM17BO60830 172 aa11.06□□□□□ -0.64
PDLIM7-202ENST00000355841 SPANXB1Q9NS25 103 aaPredicted RBP11.05□□□□□ -0.64
PDLIM7-202ENST00000355841 F8W1H4 67 aa11.04□□□□□ -0.64
PDLIM7-202ENST00000355841 NCR3O14931 201 aa11.04□□□□□ -0.64
PDLIM7-202ENST00000355841 PCLOQ9Y6V0 5065 aa11.04□□□□□ -0.64
PDLIM7-202ENST00000355841 IGKV2-28A0A075B6P5 120 aa11.04□□□□□ -0.64
PDLIM7-202ENST00000355841 IGKV2D-28P01615 120 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms