RNA–Protein interactions for RNA: ENST00000342711.5

CDC42BPG-201, Transcript of CDC42 binding protein kinase gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPG, Length 5,742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPG-201ENST00000342711 FSHBP01225 129 aa11.37□□□□□ -0.59
CDC42BPG-201ENST00000342711 ADAMTS20P59510 1910 aa11.37□□□□□ -0.59
CDC42BPG-201ENST00000342711 BCE1O60756 84 aa11.36□□□□□ -0.59
CDC42BPG-201ENST00000342711 SPAG11AQ6PDA7 123 aa11.36□□□□□ -0.59
CDC42BPG-201ENST00000342711 ACYP2P14621 99 aa11.36□□□□□ -0.59
CDC42BPG-201ENST00000342711 SPACA4Q8TDM5 124 aa11.36□□□□□ -0.59
CDC42BPG-201ENST00000342711 TLN1Q9Y490 2541 aaKnown RBP11.34□□□□□ -0.59
CDC42BPG-201ENST00000342711 MDFIQ99750 246 aa11.32□□□□□ -0.6
CDC42BPG-201ENST00000342711 LOC110117498A0A087WWA1 95 aa11.32□□□□□ -0.6
CDC42BPG-201ENST00000342711 LINC00476Q8WZB0 136 aa11.32□□□□□ -0.6
CDC42BPG-201ENST00000342711 COL4A2P08572 1712 aa11.32□□□□□ -0.6
CDC42BPG-201ENST00000342711 RPS28P62857 69 aaKnown RBP11.3□□□□□ -0.6
CDC42BPG-201ENST00000342711 TM2D3Q9BRN9 247 aa11.3□□□□□ -0.6
CDC42BPG-201ENST00000342711 TET2Q6N021 2002 aaPredicted RBP11.3□□□□□ -0.6
CDC42BPG-201ENST00000342711 PHF5AQ7RTV0 110 aaKnown RBP11.3□□□□□ -0.6
CDC42BPG-201ENST00000342711 Q6ZRX8 168 aa11.29□□□□□ -0.6
CDC42BPG-201ENST00000342711 Q8NBF4 154 aa11.29□□□□□ -0.6
CDC42BPG-201ENST00000342711 A0A1B0GW54 56 aa11.29□□□□□ -0.6
CDC42BPG-201ENST00000342711 ST20-AS1Q8NBB2 130 aa11.28□□□□□ -0.6
CDC42BPG-201ENST00000342711 NHLRC4P0CG21 123 aaPredicted RBP11.28□□□□□ -0.6
CDC42BPG-201ENST00000342711 RPL37AP61513 92 aaKnown RBP11.28□□□□□ -0.6
CDC42BPG-201ENST00000342711 H3BPC8 53 aa11.24□□□□□ -0.61
CDC42BPG-201ENST00000342711 EPM2AB3EWF7 344 aa11.24□□□□□ -0.61
CDC42BPG-201ENST00000342711 TRAV22A0A0B4J277 110 aa11.23□□□□□ -0.61
CDC42BPG-201ENST00000342711 CHTF8P0CG12 524 aa11.23□□□□□ -0.61
CDC42BPG-201ENST00000342711 SERTAD4-AS1Q5TG53 156 aa11.23□□□□□ -0.61
CDC42BPG-201ENST00000342711 H3BNG1 76 aa11.22□□□□□ -0.61
CDC42BPG-201ENST00000342711 LINC00313P59037 77 aa11.22□□□□□ -0.61
CDC42BPG-201ENST00000342711 ATP11AUNQ6ZP68 121 aa11.22□□□□□ -0.61
CDC42BPG-201ENST00000342711 IGLV8-61A0A075B6I0 122 aa11.22□□□□□ -0.61
CDC42BPG-201ENST00000342711 JMJD1CQ15652 2540 aa11.21□□□□□ -0.61
CDC42BPG-201ENST00000342711 MUC4Q99102 2169 aa11.21□□□□□ -0.61
CDC42BPG-201ENST00000342711 LITAFQ99732 161 aa11.21□□□□□ -0.62
CDC42BPG-201ENST00000342711 ABCA12Q86UK0 2595 aa11.19□□□□□ -0.62
CDC42BPG-201ENST00000342711 PTPRBP23467 1997 aa11.18□□□□□ -0.62
CDC42BPG-201ENST00000342711 USP9XQ93008 2570 aaPredicted RBP11.18□□□□□ -0.62
CDC42BPG-201ENST00000342711 C16orf90A8MZG2 172 aa11.17□□□□□ -0.62
CDC42BPG-201ENST00000342711 RTL8CO15255 209 aa11.16□□□□□ -0.62
CDC42BPG-201ENST00000342711 Q6ZRP5 223 aa11.16□□□□□ -0.62
CDC42BPG-201ENST00000342711 TLN2Q9Y4G6 2542 aa11.15□□□□□ -0.62
CDC42BPG-201ENST00000342711 TRBV7-4A0A0J9YYF1 115 aa11.15□□□□□ -0.62
CDC42BPG-201ENST00000342711 C8orf87E5RJ46 101 aa11.14□□□□□ -0.63
CDC42BPG-201ENST00000342711 GVQW2A0A096LPI5 108 aaPredicted RBP11.14□□□□□ -0.63
CDC42BPG-201ENST00000342711 LINC00588Q9Y4M8 146 aa11.14□□□□□ -0.63
CDC42BPG-201ENST00000342711 ZFYVE26Q68DK2 2539 aa11.14□□□□□ -0.63
CDC42BPG-201ENST00000342711 Q8NAQ8 132 aa11.13□□□□□ -0.63
CDC42BPG-201ENST00000342711 FN1P02751 2386 aaKnown RBP11.13□□□□□ -0.63
CDC42BPG-201ENST00000342711 FAM168BA1KXE4 195 aa11.12□□□□□ -0.63
CDC42BPG-201ENST00000342711 IGLV6-57P01721 117 aa11.12□□□□□ -0.63
CDC42BPG-201ENST00000342711 K7EQZ3 153 aa11.12□□□□□ -0.63
CDC42BPG-201ENST00000342711 TYMSOSQ8TAI1 123 aa11.12□□□□□ -0.63
CDC42BPG-201ENST00000342711 UTRNP46939 3433 aa11.11□□□□□ -0.63
CDC42BPG-201ENST00000342711 VPREB1P12018 145 aa11.11□□□□□ -0.63
CDC42BPG-201ENST00000342711 Q96NJ1 140 aa11.11□□□□□ -0.63
CDC42BPG-201ENST00000342711 NBDYA0A0U1RRE5 68 aa11.1□□□□□ -0.63
CDC42BPG-201ENST00000342711 COL27A1Q8IZC6 1860 aaPredicted RBP11.1□□□□□ -0.63
CDC42BPG-201ENST00000342711 A8MWP4 228 aa11.1□□□□□ -0.63
CDC42BPG-201ENST00000342711 WDR87Q6ZQQ6 2873 aa11.1□□□□□ -0.63
CDC42BPG-201ENST00000342711 LOC101927531A0A1B0GV80 90 aa11.08□□□□□ -0.64
CDC42BPG-201ENST00000342711 SPINT4Q6UDR6 99 aa11.07□□□□□ -0.64
CDC42BPG-201ENST00000342711 A8MUN3 132 aa11.07□□□□□ -0.64
CDC42BPG-201ENST00000342711 COA5Q86WW8 74 aa11.07□□□□□ -0.64
CDC42BPG-201ENST00000342711 PLA2G1BP04054 148 aaKnown RBP11.07□□□□□ -0.64
CDC42BPG-201ENST00000342711 SETD2Q9BYW2 2564 aaPredicted RBP11.06□□□□□ -0.64
CDC42BPG-201ENST00000342711 MRPL34Q9BQ48 92 aaKnown RBP11.04□□□□□ -0.64
CDC42BPG-201ENST00000342711 USP9YO00507 2555 aaPredicted RBP11.04□□□□□ -0.64
CDC42BPG-201ENST00000342711 ERC2-IT1O76042 136 aa11.04□□□□□ -0.64
CDC42BPG-201ENST00000342711 LRRK2Q5S007 2527 aa11.04□□□□□ -0.64
CDC42BPG-201ENST00000342711 KRTAP24-1Q3LI83 254 aa11.03□□□□□ -0.64
CDC42BPG-201ENST00000342711 IGLV1-50A0A075B6I6 118 aa11.02□□□□□ -0.64
CDC42BPG-201ENST00000342711 EIF4EBP3O60516 100 aaPredicted RBP11.02□□□□□ -0.65
CDC42BPG-201ENST00000342711 LINC01600Q96MT4 127 aa11.02□□□□□ -0.65
CDC42BPG-201ENST00000342711 PKD1L2Q7Z442 2459 aa11.01□□□□□ -0.65
CDC42BPG-201ENST00000342711 DNAH10OSP0CZ25 163 aa11□□□□□ -0.65
CDC42BPG-201ENST00000342711 FAM229AH3BQW9 127 aa11□□□□□ -0.65
CDC42BPG-201ENST00000342711 KLK9Q2XQG4 91 aa11□□□□□ -0.65
CDC42BPG-201ENST00000342711 KCNQ1DNQ9H478 68 aa10.99□□□□□ -0.65
CDC42BPG-201ENST00000342711 SSBP3-AS1Q7Z2R9 100 aa10.98□□□□□ -0.65
CDC42BPG-201ENST00000342711 IGFL1Q6UW32 110 aa10.98□□□□□ -0.65
CDC42BPG-201ENST00000342711 LINC00528Q8N1L1 170 aa10.98□□□□□ -0.65
CDC42BPG-201ENST00000342711 CEP295Q9C0D2 2601 aa10.97□□□□□ -0.65
CDC42BPG-201ENST00000342711 CYP4F30PQ9H0H9 118 aa10.97□□□□□ -0.65
CDC42BPG-201ENST00000342711 ANKRD11Q6UB99 2663 aaPredicted RBP10.97□□□□□ -0.65
CDC42BPG-201ENST00000342711 UQCR11O14957 56 aa10.94□□□□□ -0.66
CDC42BPG-201ENST00000342711 DSCR10P59022 87 aa10.94□□□□□ -0.66
CDC42BPG-201ENST00000342711 CSNK1G2-AS1Q8NCQ2 148 aa10.94□□□□□ -0.66
CDC42BPG-201ENST00000342711 C8orf17Q9NRJ1 99 aa10.92□□□□□ -0.66
CDC42BPG-201ENST00000342711 PRR15Q8IV56 129 aa10.91□□□□□ -0.66
CDC42BPG-201ENST00000342711 KLKP1Q107X0 134 aa10.9□□□□□ -0.66
CDC42BPG-201ENST00000342711 A0A0G2JQZ4 141 aa10.9□□□□□ -0.66
CDC42BPG-201ENST00000342711 A0A1W2PNN7 141 aa10.9□□□□□ -0.66
CDC42BPG-201ENST00000342711 Q8N377 158 aa10.89□□□□□ -0.67
CDC42BPG-201ENST00000342711 C15orf56Q8N910 161 aa10.89□□□□□ -0.67
CDC42BPG-201ENST00000342711 C9orf129Q5T035 196 aaKnown RBP10.87□□□□□ -0.67
CDC42BPG-201ENST00000342711 MIR22HGQ0VDD5 57 aa10.87□□□□□ -0.67
CDC42BPG-201ENST00000342711 APLNQ9ULZ1 77 aa10.87□□□□□ -0.67
CDC42BPG-201ENST00000342711 A0A1B0GVX0 72 aa10.85□□□□□ -0.67
CDC42BPG-201ENST00000342711 PRR34Q9NV39 138 aa10.85□□□□□ -0.67
CDC42BPG-201ENST00000342711 H7BZZ5 65 aa10.84□□□□□ -0.67
CDC42BPG-201ENST00000342711 LINC00336Q6ZUF6 198 aa10.83□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms