RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 SND1-IT1Q9HBX3 110 aa8.25□□□□□ -1.09
TUBD1-202ENST00000340993 E9PLD3 99 aa8.24□□□□□ -1.09
TUBD1-202ENST00000340993 NMUP48645 174 aa8.24□□□□□ -1.09
TUBD1-202ENST00000340993 NPC2P61916 151 aa8.24□□□□□ -1.09
TUBD1-202ENST00000340993 UBE2BP63146 152 aa8.24□□□□□ -1.09
TUBD1-202ENST00000340993 KRTAP11-1Q8IUC1 163 aa8.24□□□□□ -1.09
TUBD1-202ENST00000340993 SCGB1D1O95968 90 aa8.23□□□□□ -1.09
TUBD1-202ENST00000340993 ANKRD39Q53RE8 183 aa8.23□□□□□ -1.09
TUBD1-202ENST00000340993 INAFM2P0DMQ5 153 aa8.22□□□□□ -1.09
TUBD1-202ENST00000340993 HNRNPA3P51991 378 aaKnown RBP8.22□□□□□ -1.09
TUBD1-202ENST00000340993 MIR7-3HGQ8N6C7 128 aa8.22□□□□□ -1.09
TUBD1-202ENST00000340993 C22orf24Q9Y442 160 aa8.22□□□□□ -1.09
TUBD1-202ENST00000340993 Q8NDZ9 215 aa8.22□□□□□ -1.09
TUBD1-202ENST00000340993 RPL37AP8A6NKH3 93 aa8.21□□□□□ -1.1
TUBD1-202ENST00000340993 KRTAP10-4P60372 401 aaPredicted RBP8.21□□□□□ -1.1
TUBD1-202ENST00000340993 HERV-K104P63124 156 aa8.21□□□□□ -1.1
TUBD1-202ENST00000340993 SFTA2Q6UW10 78 aa8.21□□□□□ -1.1
TUBD1-202ENST00000340993 ZNF815PA8K554 130 aa8.2□□□□□ -1.1
TUBD1-202ENST00000340993 PRR3P79522 188 aaKnown RBP8.2□□□□□ -1.1
TUBD1-202ENST00000340993 COX17Q14061 63 aa8.2□□□□□ -1.1
TUBD1-202ENST00000340993 NKAPP1Q8N9T2 125 aa8.2□□□□□ -1.1
TUBD1-202ENST00000340993 PSORS1C2Q9UIG4 136 aa8.2□□□□□ -1.1
TUBD1-202ENST00000340993 PKHD1L1Q86WI1 4243 aa8.2□□□□□ -1.1
TUBD1-202ENST00000340993 C1orf137Q5JT78 98 aa8.2□□□□□ -1.1
TUBD1-202ENST00000340993 LRP1Q07954 4544 aaKnown RBP8.19□□□□□ -1.1
TUBD1-202ENST00000340993 IGKV2-28A0A075B6P5 120 aa8.18□□□□□ -1.1
TUBD1-202ENST00000340993 A0A0J9YXY3 114 aa8.18□□□□□ -1.1
TUBD1-202ENST00000340993 IGKV2D-28P01615 120 aa8.18□□□□□ -1.1
TUBD1-202ENST00000340993 MRPL55Q7Z7F7 128 aaKnown RBP8.18□□□□□ -1.1
TUBD1-202ENST00000340993 PCP2Q8IVA1 136 aa8.18□□□□□ -1.1
TUBD1-202ENST00000340993 TP73-AS1Q9UF72 201 aa8.18□□□□□ -1.1
TUBD1-202ENST00000340993 NCR3O14931 201 aa8.17□□□□□ -1.1
TUBD1-202ENST00000340993 ADAMTSL4-AS1Q5T5F5 129 aa8.17□□□□□ -1.1
TUBD1-202ENST00000340993 BOD1L2Q8IYS8 172 aa8.17□□□□□ -1.1
TUBD1-202ENST00000340993 LINC00167Q96N53 147 aa8.17□□□□□ -1.1
TUBD1-202ENST00000340993 VPREB1P12018 145 aa8.16□□□□□ -1.1
TUBD1-202ENST00000340993 HSBP1L1C9JCN9 74 aa8.15□□□□□ -1.1
TUBD1-202ENST00000340993 SCGB1D4Q6XE38 83 aa8.15□□□□□ -1.1
TUBD1-202ENST00000340993 EIF4EBP3O60516 100 aaPredicted RBP8.15□□□□□ -1.11
TUBD1-202ENST00000340993 FAT3Q8TDW7 4589 aa8.14□□□□□ -1.11
TUBD1-202ENST00000340993 LBHQ53QV2 105 aaPredicted RBP8.14□□□□□ -1.11
TUBD1-202ENST00000340993 MIEN1Q9BRT3 115 aa8.14□□□□□ -1.11
TUBD1-202ENST00000340993 LINC00587B1AMM8 73 aa8.13□□□□□ -1.11
TUBD1-202ENST00000340993 RPL24P83731 157 aaKnown RBP8.13□□□□□ -1.11
TUBD1-202ENST00000340993 SOSTDC1Q6X4U4 206 aa8.12□□□□□ -1.11
TUBD1-202ENST00000340993 PLA2G2DQ9UNK4 145 aa8.12□□□□□ -1.11
TUBD1-202ENST00000340993 TMEM238C9JI98 176 aa8.12□□□□□ -1.11
TUBD1-202ENST00000340993 LITAFQ99732 161 aa8.11□□□□□ -1.11
TUBD1-202ENST00000340993 PAM16Q9Y3D7 125 aa8.11□□□□□ -1.11
TUBD1-202ENST00000340993 IGLV5-37A0A075B6J1 123 aa8.1□□□□□ -1.11
TUBD1-202ENST00000340993 AKR1D1P51857 326 aa8.1□□□□□ -1.11
TUBD1-202ENST00000340993 IGLV7-43P04211 117 aa8.09□□□□□ -1.11
TUBD1-202ENST00000340993 LINC00308Q8TCZ7 52 aa8.08□□□□□ -1.12
TUBD1-202ENST00000340993 M0R378 163 aa8.07□□□□□ -1.12
TUBD1-202ENST00000340993 SPATA45Q537H7 98 aa8.07□□□□□ -1.12
TUBD1-202ENST00000340993 C14orf144Q96I85 54 aa8.07□□□□□ -1.12
TUBD1-202ENST00000340993 DMBT1Q9UGM3 2413 aaPredicted RBP8.07□□□□□ -1.12
TUBD1-202ENST00000340993 IGLV1-50A0A075B6I6 118 aa8.07□□□□□ -1.12
TUBD1-202ENST00000340993 JOSD1Q15040 202 aaPredicted RBP8.07□□□□□ -1.12
TUBD1-202ENST00000340993 VAMP8Q9BV40 100 aa8.07□□□□□ -1.12
TUBD1-202ENST00000340993 TRBV10-3A0A0K0K1G6 114 aa8.06□□□□□ -1.12
TUBD1-202ENST00000340993 PRLHP81277 87 aa8.06□□□□□ -1.12
TUBD1-202ENST00000340993 PYY3Q5JQD4 70 aa8.06□□□□□ -1.12
TUBD1-202ENST00000340993 TIMM17BO60830 172 aa8.05□□□□□ -1.12
TUBD1-202ENST00000340993 BCE1O60756 84 aa8.05□□□□□ -1.12
TUBD1-202ENST00000340993 UBE2AP49459 152 aa8.05□□□□□ -1.12
TUBD1-202ENST00000340993 REG3GQ6UW15 175 aa8.05□□□□□ -1.12
TUBD1-202ENST00000340993 FAM19A1Q7Z5A9 133 aa8.05□□□□□ -1.12
TUBD1-202ENST00000340993 TMEM126AQ9H061 195 aa8.05□□□□□ -1.12
TUBD1-202ENST00000340993 S100A7L2Q5SY68 101 aa8.04□□□□□ -1.12
TUBD1-202ENST00000340993 SPINK6Q6UWN8 80 aa8.04□□□□□ -1.12
TUBD1-202ENST00000340993 J3QL48 77 aa8.03□□□□□ -1.12
TUBD1-202ENST00000340993 DDTP30046 118 aa8.03□□□□□ -1.12
TUBD1-202ENST00000340993 SRSF9Q13242 221 aaKnown RBP eCLIP8.03□□□□□ -1.12
TUBD1-202ENST00000340993 MUSTN1Q8IVN3 82 aa8.03□□□□□ -1.12
TUBD1-202ENST00000340993 OR13C6PQ8NH95 151 aa8.03□□□□□ -1.12
TUBD1-202ENST00000340993 SPANXB1Q9NS25 103 aaPredicted RBP8.03□□□□□ -1.12
TUBD1-202ENST00000340993 SPANXDQ9BXN6 97 aa8.02□□□□□ -1.13
TUBD1-202ENST00000340993 SPANXCQ9NY87 97 aa8.02□□□□□ -1.13
TUBD1-202ENST00000340993 LOC107984156A0A0G2JMH3 177 aa8.02□□□□□ -1.13
TUBD1-202ENST00000340993 COX8AP10176 69 aa8.02□□□□□ -1.13
TUBD1-202ENST00000340993 ARL17AQ8IVW1 177 aa8.02□□□□□ -1.13
TUBD1-202ENST00000340993 HERC1Q15751 4861 aa8.01□□□□□ -1.13
TUBD1-202ENST00000340993 ZNF861PO60384 105 aa8.01□□□□□ -1.13
TUBD1-202ENST00000340993 DIRC1Q969H9 104 aa8□□□□□ -1.13
TUBD1-202ENST00000340993 H0Y9J4 135 aa7.99□□□□□ -1.13
TUBD1-202ENST00000340993 NDUFC2O95298 119 aa7.99□□□□□ -1.13
TUBD1-202ENST00000340993 RPL28P46779 137 aaKnown RBP7.99□□□□□ -1.13
TUBD1-202ENST00000340993 C12orf57Q99622 126 aa7.99□□□□□ -1.13
TUBD1-202ENST00000340993 HIGD2AQ9BW72 106 aa7.99□□□□□ -1.13
TUBD1-202ENST00000340993 TNXBP22105 4242 aa7.99□□□□□ -1.13
TUBD1-202ENST00000340993 PRYO14603 147 aa7.98□□□□□ -1.13
TUBD1-202ENST00000340993 LINC00337Q8N6G1 96 aa7.98□□□□□ -1.13
TUBD1-202ENST00000340993 HIST1H4GQ99525 98 aa7.98□□□□□ -1.13
TUBD1-202ENST00000340993 ANAPC11Q9NYG5 84 aa7.98□□□□□ -1.13
TUBD1-202ENST00000340993 TRBV10-2A0A0K0K1G8 114 aa7.97□□□□□ -1.13
TUBD1-202ENST00000340993 ETDCA0A1B0GVM5 59 aa7.97□□□□□ -1.13
TUBD1-202ENST00000340993 TRAV23DV6A0A075B6W5 121 aa7.97□□□□□ -1.13
TUBD1-202ENST00000340993 IGLV6-57P01721 117 aa7.97□□□□□ -1.13
TUBD1-202ENST00000340993 SLC25A34Q6PIV7 304 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms