RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 LOC100996750A0A140TA64 210 aa7.36□□□□□ -1.23
RTN3-201ENST00000338850 DEFB130BP0DP73 79 aa7.36□□□□□ -1.23
RTN3-201ENST00000338850 DEFB130AP0DP74 79 aa7.36□□□□□ -1.23
RTN3-201ENST00000338850 Q6JHZ5 121 aa7.36□□□□□ -1.23
RTN3-201ENST00000338850 KRTAP4-6Q9BYQ5 205 aa7.36□□□□□ -1.23
RTN3-201ENST00000338850 TMEM126AQ9H061 195 aa7.36□□□□□ -1.23
RTN3-201ENST00000338850 ORMDL1Q9P0S3 153 aa7.36□□□□□ -1.23
RTN3-201ENST00000338850 A0A087WYN8 130 aa7.35□□□□□ -1.23
RTN3-201ENST00000338850 GVQW2A0A096LPI5 108 aaPredicted RBP7.35□□□□□ -1.23
RTN3-201ENST00000338850 JMJD7-PLA2G4BH0Y9G9 81 aa7.35□□□□□ -1.23
RTN3-201ENST00000338850 HIST1H4AP62805 103 aaKnown RBP7.35□□□□□ -1.23
RTN3-201ENST00000338850 CFAP161Q6P656 301 aa7.35□□□□□ -1.23
RTN3-201ENST00000338850 SMCR5Q8TEV8 140 aa7.35□□□□□ -1.23
RTN3-201ENST00000338850 A0A0J9YWU9 116 aa7.34□□□□□ -1.23
RTN3-201ENST00000338850 XCL1P47992 114 aa7.34□□□□□ -1.23
RTN3-201ENST00000338850 S100A7L2Q5SY68 101 aa7.34□□□□□ -1.23
RTN3-201ENST00000338850 LELP1Q5T871 98 aa7.34□□□□□ -1.23
RTN3-201ENST00000338850 LYSTQ99698 3801 aa7.33□□□□□ -1.24
RTN3-201ENST00000338850 IGKV3OR2-268A0A0C4DH90 116 aa7.33□□□□□ -1.24
RTN3-201ENST00000338850 LECT2O14960 151 aa7.33□□□□□ -1.24
RTN3-201ENST00000338850 PFN2P35080 140 aa7.33□□□□□ -1.24
RTN3-201ENST00000338850 NANOS2P60321 138 aaKnown RBP7.33□□□□□ -1.24
RTN3-201ENST00000338850 ATP5EP2Q5VTU8 51 aa7.33□□□□□ -1.24
RTN3-201ENST00000338850 CHCHD10Q8WYQ3 142 aaPredicted RBP7.33□□□□□ -1.24
RTN3-201ENST00000338850 PRR34Q9NV39 138 aa7.33□□□□□ -1.24
RTN3-201ENST00000338850 H3BNG1 76 aa7.32□□□□□ -1.24
RTN3-201ENST00000338850 TMEM256-PLSCR3K7ERE1 68 aa7.32□□□□□ -1.24
RTN3-201ENST00000338850 DAD1P61803 113 aa7.32□□□□□ -1.24
RTN3-201ENST00000338850 REG3AQ06141 175 aa7.32□□□□□ -1.24
RTN3-201ENST00000338850 Q8NAQ8 132 aa7.32□□□□□ -1.24
RTN3-201ENST00000338850 Q9HAA7 133 aa7.32□□□□□ -1.24
RTN3-201ENST00000338850 FAM236AA0A1B0GUQ0 79 aa7.31□□□□□ -1.24
RTN3-201ENST00000338850 FAM236BA0A1B0GV22 79 aa7.31□□□□□ -1.24
RTN3-201ENST00000338850 GAGE2AQ6NT46 116 aa7.31□□□□□ -1.24
RTN3-201ENST00000338850 EPPK1P58107 5090 aaKnown RBP7.3□□□□□ -1.24
RTN3-201ENST00000338850 CCDC179H3BU77 68 aa7.3□□□□□ -1.24
RTN3-201ENST00000338850 ATOX1O00244 68 aa7.3□□□□□ -1.24
RTN3-201ENST00000338850 UQCRQO14949 82 aa7.3□□□□□ -1.24
RTN3-201ENST00000338850 SPART-AS1P0CW21 52 aa7.3□□□□□ -1.24
RTN3-201ENST00000338850 LINC00269Q8N2A0 174 aa7.3□□□□□ -1.24
RTN3-201ENST00000338850 Q8N814 137 aa7.3□□□□□ -1.24
RTN3-201ENST00000338850 OR13C6PQ8NH95 151 aa7.3□□□□□ -1.24
RTN3-201ENST00000338850 B5MCH6 92 aa7.29□□□□□ -1.24
RTN3-201ENST00000338850 F8WDY8 70 aa7.29□□□□□ -1.24
RTN3-201ENST00000338850 CCKP06307 115 aa7.29□□□□□ -1.24
RTN3-201ENST00000338850 ALMS1Q8TCU4 4167 aa7.28□□□□□ -1.24
RTN3-201ENST00000338850 TRBV10-3A0A0K0K1G6 114 aa7.28□□□□□ -1.24
RTN3-201ENST00000338850 ANGP03950 147 aaKnown RBP7.28□□□□□ -1.24
RTN3-201ENST00000338850 PLECQ15149 4684 aaKnown RBP7.28□□□□□ -1.24
RTN3-201ENST00000338850 BIRC6Q9NR09 4857 aa7.28□□□□□ -1.24
RTN3-201ENST00000338850 TRBV7-6A0A0J9YX20 115 aa7.27□□□□□ -1.25
RTN3-201ENST00000338850 GHRHP01286 108 aa7.27□□□□□ -1.25
RTN3-201ENST00000338850 SPAG11BQ08648 103 aa7.27□□□□□ -1.25
RTN3-201ENST00000338850 DEFB135Q30KP9 77 aa7.27□□□□□ -1.25
RTN3-201ENST00000338850 LYPD5Q6UWN5 251 aa7.27□□□□□ -1.25
RTN3-201ENST00000338850 C3orf22Q8N5N4 141 aa7.27□□□□□ -1.25
RTN3-201ENST00000338850 LINC00526Q96FQ7 95 aa7.27□□□□□ -1.25
RTN3-201ENST00000338850 C14orf132Q9NPU4 83 aa7.27□□□□□ -1.25
RTN3-201ENST00000338850 LOC110117498A0A087WWA1 95 aa7.26□□□□□ -1.25
RTN3-201ENST00000338850 IGLV6-57P01721 117 aa7.26□□□□□ -1.25
RTN3-201ENST00000338850 PDE6GP18545 87 aa7.26□□□□□ -1.25
RTN3-201ENST00000338850 LINC00575Q6W349 94 aa7.26□□□□□ -1.25
RTN3-201ENST00000338850 COX7CP15954 63 aa7.25□□□□□ -1.25
RTN3-201ENST00000338850 HYDINQ4G0P3 5121 aa7.25□□□□□ -1.25
RTN3-201ENST00000338850 A0A096LPF7 62 aa7.24□□□□□ -1.25
RTN3-201ENST00000338850 ZNF561-AS1K7EIQ3 104 aa7.24□□□□□ -1.25
RTN3-201ENST00000338850 BCE1O60756 84 aa7.24□□□□□ -1.25
RTN3-201ENST00000338850 CRYGAP11844 174 aa7.24□□□□□ -1.25
RTN3-201ENST00000338850 RPL18AQ02543 176 aaKnown RBP7.24□□□□□ -1.25
RTN3-201ENST00000338850 C9orf129Q5T035 196 aaKnown RBP7.24□□□□□ -1.25
RTN3-201ENST00000338850 CLPSL2Q6UWE3 100 aa7.24□□□□□ -1.25
RTN3-201ENST00000338850 C6orf223Q8N319 242 aa7.24□□□□□ -1.25
RTN3-201ENST00000338850 LINC00476Q8WZB0 136 aa7.24□□□□□ -1.25
RTN3-201ENST00000338850 LINC00846Q9NV44 126 aa7.24□□□□□ -1.25
RTN3-201ENST00000338850 NUPR2A6NF83 97 aa7.23□□□□□ -1.25
RTN3-201ENST00000338850 C11orf68Q9H3H3 251 aaKnown RBP7.23□□□□□ -1.25
RTN3-201ENST00000338850 SS18L2Q9UHA2 77 aa7.23□□□□□ -1.25
RTN3-201ENST00000338850 CELA1Q9UNI1 258 aa7.23□□□□□ -1.25
RTN3-201ENST00000338850 NCR3O14931 201 aa7.22□□□□□ -1.25
RTN3-201ENST00000338850 C6orf99Q4VX62 202 aa7.22□□□□□ -1.25
RTN3-201ENST00000338850 SVIPQ8NHG7 77 aa7.22□□□□□ -1.25
RTN3-201ENST00000338850 C2orf48Q96LS8 159 aa7.22□□□□□ -1.25
RTN3-201ENST00000338850 hADV29S1A0JD25 119 aa7.21□□□□□ -1.26
RTN3-201ENST00000338850 LY6G6CO95867 125 aa7.2□□□□□ -1.26
RTN3-201ENST00000338850 C9orf153Q5TBE3 101 aa7.2□□□□□ -1.26
RTN3-201ENST00000338850 ENHOQ6UWT2 76 aa7.2□□□□□ -1.26
RTN3-201ENST00000338850 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.2□□□□□ -1.26
RTN3-201ENST00000338850 KRTAP17-1Q9BYP8 105 aa7.2□□□□□ -1.26
RTN3-201ENST00000338850 IGLV10-54A0A075B6I4 117 aa7.19□□□□□ -1.26
RTN3-201ENST00000338850 UNQ6190/PRO20217Q6UXQ8 127 aa7.19□□□□□ -1.26
RTN3-201ENST00000338850 Q6ZQT0 140 aa7.19□□□□□ -1.26
RTN3-201ENST00000338850 SERP2Q8N6R1 65 aa7.19□□□□□ -1.26
RTN3-201ENST00000338850 Q8NDZ9 215 aa7.19□□□□□ -1.26
RTN3-201ENST00000338850 SLPIP03973 132 aa7.18□□□□□ -1.26
RTN3-201ENST00000338850 RBM3P98179 157 aaKnown RBP7.18□□□□□ -1.26
RTN3-201ENST00000338850 C10orf25Q5T742 122 aa7.18□□□□□ -1.26
RTN3-201ENST00000338850 KRTAP26-1Q6PEX3 210 aa7.18□□□□□ -1.26
RTN3-201ENST00000338850 DIRC1Q969H9 104 aa7.18□□□□□ -1.26
RTN3-201ENST00000338850 UBL5Q9BZL1 73 aa7.18□□□□□ -1.26
RTN3-201ENST00000338850 C6orf48Q9UBA6 75 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms