RNA–Protein interactions for RNA: ENST00000338684.9

MUC1-202, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,107 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-202ENST00000338684 MT1HL1P0DM35 61 aa9.39□□□□□ -0.91
MUC1-202ENST00000338684 PFN2P35080 140 aa9.39□□□□□ -0.91
MUC1-202ENST00000338684 PLA2G2DQ9UNK4 145 aa9.39□□□□□ -0.91
MUC1-202ENST00000338684 HSBP1L1C9JCN9 74 aa9.37□□□□□ -0.91
MUC1-202ENST00000338684 LINC00158P58513 81 aa9.37□□□□□ -0.91
MUC1-202ENST00000338684 MEIG1Q5JSS6 88 aa9.37□□□□□ -0.91
MUC1-202ENST00000338684 C9orf129Q5T035 196 aaKnown RBP9.36□□□□□ -0.91
MUC1-202ENST00000338684 XAGE1AQ9HD64 81 aa9.36□□□□□ -0.91
MUC1-202ENST00000338684 IGKV2D-26A0A0A0MRZ7 120 aa9.35□□□□□ -0.91
MUC1-202ENST00000338684 ANKRD39Q53RE8 183 aa9.35□□□□□ -0.91
MUC1-202ENST00000338684 A0A1W2PNN7 141 aa9.34□□□□□ -0.91
MUC1-202ENST00000338684 SMIM13P0DJ93 91 aa9.34□□□□□ -0.91
MUC1-202ENST00000338684 A0A0U1RRA0 63 aa9.33□□□□□ -0.92
MUC1-202ENST00000338684 ZNF815PA8K554 130 aa9.33□□□□□ -0.92
MUC1-202ENST00000338684 JOSD1Q15040 202 aaPredicted RBP9.33□□□□□ -0.92
MUC1-202ENST00000338684 SND1-IT1Q9HBX3 110 aa9.33□□□□□ -0.92
MUC1-202ENST00000338684 A0A0J9YXY3 114 aa9.32□□□□□ -0.92
MUC1-202ENST00000338684 FAM168BA1KXE4 195 aa9.32□□□□□ -0.92
MUC1-202ENST00000338684 FAM19A5Q7Z5A7 132 aaPredicted RBP9.32□□□□□ -0.92
MUC1-202ENST00000338684 C7orf33Q8WU49 177 aa9.32□□□□□ -0.92
MUC1-202ENST00000338684 MIR7-3HGQ8N6C7 128 aa9.3□□□□□ -0.92
MUC1-202ENST00000338684 TTTY13Q9BZ97 58 aa9.3□□□□□ -0.92
MUC1-202ENST00000338684 M0QXV9 152 aa9.28□□□□□ -0.92
MUC1-202ENST00000338684 TIMM17BO60830 172 aa9.28□□□□□ -0.92
MUC1-202ENST00000338684 RPL24P83731 157 aaKnown RBP9.28□□□□□ -0.92
MUC1-202ENST00000338684 KRTAP7-1Q8IUC3 87 aa9.28□□□□□ -0.92
MUC1-202ENST00000338684 PCP2Q8IVA1 136 aa9.28□□□□□ -0.92
MUC1-202ENST00000338684 LBHQ53QV2 105 aaPredicted RBP9.27□□□□□ -0.93
MUC1-202ENST00000338684 SCGB1D4Q6XE38 83 aa9.27□□□□□ -0.93
MUC1-202ENST00000338684 PHF5AQ7RTV0 110 aaKnown RBP9.27□□□□□ -0.93
MUC1-202ENST00000338684 TP73-AS1Q9UF72 201 aa9.27□□□□□ -0.93
MUC1-202ENST00000338684 IGLV5-37A0A075B6J1 123 aa9.26□□□□□ -0.93
MUC1-202ENST00000338684 DAND5Q8N907 189 aa9.26□□□□□ -0.93
MUC1-202ENST00000338684 NKAPP1Q8N9T2 125 aa9.26□□□□□ -0.93
MUC1-202ENST00000338684 VAMP8Q9BV40 100 aa9.26□□□□□ -0.93
MUC1-202ENST00000338684 C22orf24Q9Y442 160 aa9.26□□□□□ -0.93
MUC1-202ENST00000338684 TNXBP22105 4242 aa9.25□□□□□ -0.93
MUC1-202ENST00000338684 LOC107984156A0A0G2JMH3 177 aa9.25□□□□□ -0.93
MUC1-202ENST00000338684 PYY3Q5JQD4 70 aa9.25□□□□□ -0.93
MUC1-202ENST00000338684 ADAMTSL4-AS1Q5T5F5 129 aa9.25□□□□□ -0.93
MUC1-202ENST00000338684 ARL17AQ8IVW1 177 aa9.25□□□□□ -0.93
MUC1-202ENST00000338684 MIEN1Q9BRT3 115 aa9.25□□□□□ -0.93
MUC1-202ENST00000338684 LRP2P98164 4655 aa9.25□□□□□ -0.93
MUC1-202ENST00000338684 TMEM238C9JI98 176 aa9.24□□□□□ -0.93
MUC1-202ENST00000338684 VPREB1P12018 145 aa9.24□□□□□ -0.93
MUC1-202ENST00000338684 MRPL55Q7Z7F7 128 aaKnown RBP9.24□□□□□ -0.93
MUC1-202ENST00000338684 BOD1L2Q8IYS8 172 aa9.24□□□□□ -0.93
MUC1-202ENST00000338684 LITAFQ99732 161 aa9.24□□□□□ -0.93
MUC1-202ENST00000338684 UBE2BP63146 152 aa9.23□□□□□ -0.93
MUC1-202ENST00000338684 SPATA45Q537H7 98 aa9.23□□□□□ -0.93
MUC1-202ENST00000338684 PAM16Q9Y3D7 125 aa9.23□□□□□ -0.93
MUC1-202ENST00000338684 RNF213Q63HN8 5207 aa9.22□□□□□ -0.93
MUC1-202ENST00000338684 COX8AP10176 69 aa9.22□□□□□ -0.93
MUC1-202ENST00000338684 Q6ZVH6 145 aa9.21□□□□□ -0.94
MUC1-202ENST00000338684 COPS9Q8WXC6 57 aa9.21□□□□□ -0.94
MUC1-202ENST00000338684 DLEU1O43261 78 aa9.2□□□□□ -0.94
MUC1-202ENST00000338684 PRR3P79522 188 aaKnown RBP9.2□□□□□ -0.94
MUC1-202ENST00000338684 LINC00308Q8TCZ7 52 aa9.2□□□□□ -0.94
MUC1-202ENST00000338684 LINC01600Q96MT4 127 aa9.2□□□□□ -0.94
MUC1-202ENST00000338684 LINC00167Q96N53 147 aa9.2□□□□□ -0.94
MUC1-202ENST00000338684 SPANXDQ9BXN6 97 aa9.2□□□□□ -0.94
MUC1-202ENST00000338684 SPANXCQ9NY87 97 aa9.2□□□□□ -0.94
MUC1-202ENST00000338684 M0R378 163 aa9.19□□□□□ -0.94
MUC1-202ENST00000338684 NDUFC2O95298 119 aa9.19□□□□□ -0.94
MUC1-202ENST00000338684 NPC2P61916 151 aa9.19□□□□□ -0.94
MUC1-202ENST00000338684 Q8NDZ9 215 aa9.19□□□□□ -0.94
MUC1-202ENST00000338684 PSORS1C2Q9UIG4 136 aa9.19□□□□□ -0.94
MUC1-202ENST00000338684 GAGE10A6NGK3 116 aa9.18□□□□□ -0.94
MUC1-202ENST00000338684 IFITM1P13164 125 aa9.18□□□□□ -0.94
MUC1-202ENST00000338684 SOSTDC1Q6X4U4 206 aa9.18□□□□□ -0.94
MUC1-202ENST00000338684 RPL37AP8A6NKH3 93 aa9.17□□□□□ -0.94
MUC1-202ENST00000338684 C14orf144Q96I85 54 aa9.17□□□□□ -0.94
MUC1-202ENST00000338684 PPDPFQ9H3Y8 114 aa9.17□□□□□ -0.94
MUC1-202ENST00000338684 TRBV10-2A0A0K0K1G8 114 aa9.16□□□□□ -0.94
MUC1-202ENST00000338684 S100A12P80511 92 aa9.16□□□□□ -0.94
MUC1-202ENST00000338684 SLC25A34Q6PIV7 304 aa9.16□□□□□ -0.94
MUC1-202ENST00000338684 KRTAP11-1Q8IUC1 163 aa9.16□□□□□ -0.94
MUC1-202ENST00000338684 SPANXB1Q9NS25 103 aaPredicted RBP9.16□□□□□ -0.94
MUC1-202ENST00000338684 IGLV1-50A0A075B6I6 118 aa9.15□□□□□ -0.94
MUC1-202ENST00000338684 NCR3O14931 201 aa9.15□□□□□ -0.94
MUC1-202ENST00000338684 EIF4EBP3O60516 100 aaPredicted RBP9.15□□□□□ -0.94
MUC1-202ENST00000338684 KRTAP10-8P60410 259 aa9.15□□□□□ -0.94
MUC1-202ENST00000338684 SRSF9Q13242 221 aaKnown RBP eCLIP9.15□□□□□ -0.94
MUC1-202ENST00000338684 C1orf137Q5JT78 98 aa9.15□□□□□ -0.94
MUC1-202ENST00000338684 IGKV2-28A0A075B6P5 120 aa9.14□□□□□ -0.95
MUC1-202ENST00000338684 IGKV2D-28P01615 120 aa9.14□□□□□ -0.95
MUC1-202ENST00000338684 MUSTN1Q8IVN3 82 aa9.13□□□□□ -0.95
MUC1-202ENST00000338684 SMIM6P0DI80 62 aa9.12□□□□□ -0.95
MUC1-202ENST00000338684 SPINK6Q6UWN8 80 aa9.12□□□□□ -0.95
MUC1-202ENST00000338684 LINC00518Q8N0U6 118 aa9.12□□□□□ -0.95
MUC1-202ENST00000338684 HIGD1BQ9P298 99 aa9.12□□□□□ -0.95
MUC1-202ENST00000338684 LOC105371267A0A1B0GV96 52 aa9.11□□□□□ -0.95
MUC1-202ENST00000338684 IGLV7-43P04211 117 aa9.11□□□□□ -0.95
MUC1-202ENST00000338684 S100A7L2Q5SY68 101 aa9.11□□□□□ -0.95
MUC1-202ENST00000338684 TRBV10-3A0A0K0K1G6 114 aa9.1□□□□□ -0.95
MUC1-202ENST00000338684 BCE1O60756 84 aa9.1□□□□□ -0.95
MUC1-202ENST00000338684 DDTP30046 118 aa9.1□□□□□ -0.95
MUC1-202ENST00000338684 REG3GQ6UW15 175 aa9.1□□□□□ -0.95
MUC1-202ENST00000338684 HIST1H4GQ99525 98 aa9.1□□□□□ -0.95
MUC1-202ENST00000338684 PRYO14603 147 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms