RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 Q6ZRU5 148 aa7.05□□□□□ -1.28
C9orf85-201ENST00000334731 SMIM2Q9BVW6 85 aa7.05□□□□□ -1.28
C9orf85-201ENST00000334731 LINC00474Q9P2X8 69 aa7.05□□□□□ -1.28
C9orf85-201ENST00000334731 FAT3Q8TDW7 4589 aa7.05□□□□□ -1.28
C9orf85-201ENST00000334731 IGLV4-69A0A075B6H9 119 aa7.04□□□□□ -1.28
C9orf85-201ENST00000334731 K7EMI3 77 aa7.04□□□□□ -1.28
C9orf85-201ENST00000334731 DPM2O94777 84 aa7.04□□□□□ -1.28
C9orf85-201ENST00000334731 RPL24P83731 157 aaKnown RBP7.04□□□□□ -1.28
C9orf85-201ENST00000334731 KRTAP19-4Q3LI73 84 aa7.04□□□□□ -1.28
C9orf85-201ENST00000334731 C7orf33Q8WU49 177 aa7.04□□□□□ -1.28
C9orf85-201ENST00000334731 IGKCP01834 107 aa7.03□□□□□ -1.28
C9orf85-201ENST00000334731 SERTAD4-AS1Q5TG53 156 aa7.03□□□□□ -1.28
C9orf85-201ENST00000334731 C5orf38Q86SI9 138 aa7.03□□□□□ -1.28
C9orf85-201ENST00000334731 OPRPNQ99935 248 aaPredicted RBP7.03□□□□□ -1.28
C9orf85-201ENST00000334731 PKIGQ9Y2B9 76 aa7.03□□□□□ -1.28
C9orf85-201ENST00000334731 PKHD1L1Q86WI1 4243 aa7.02□□□□□ -1.29
C9orf85-201ENST00000334731 LOC389332A0A1B0GUA5 103 aa7.02□□□□□ -1.29
C9orf85-201ENST00000334731 PRSS47A8MTI9 375 aa7.02□□□□□ -1.29
C9orf85-201ENST00000334731 IFI27P40305 119 aaPredicted RBP7.02□□□□□ -1.29
C9orf85-201ENST00000334731 CKS1BP61024 79 aa7.02□□□□□ -1.29
C9orf85-201ENST00000334731 MRPS36P82909 103 aaKnown RBP7.02□□□□□ -1.29
C9orf85-201ENST00000334731 SPANXA1Q9NS26 97 aa7.02□□□□□ -1.29
C9orf85-201ENST00000334731 MT1HL1P0DM35 61 aa7.01□□□□□ -1.29
C9orf85-201ENST00000334731 HERVK_113P61574 105 aa7.01□□□□□ -1.29
C9orf85-201ENST00000334731 PAPPA-AS1Q5QFB9 102 aa7.01□□□□□ -1.29
C9orf85-201ENST00000334731 RAB37Q96AX2 223 aa7.01□□□□□ -1.29
C9orf85-201ENST00000334731 C2orf48Q96LS8 159 aa7.01□□□□□ -1.29
C9orf85-201ENST00000334731 SPANXB1Q9NS25 103 aaPredicted RBP7.01□□□□□ -1.29
C9orf85-201ENST00000334731 IGHV3OR16-9A0A0B4J2B5 98 aa7□□□□□ -1.29
C9orf85-201ENST00000334731 LOC107984640A0A0U1RRK4 108 aa7□□□□□ -1.29
C9orf85-201ENST00000334731 E9PLD3 99 aa7□□□□□ -1.29
C9orf85-201ENST00000334731 APOMO95445 188 aa7□□□□□ -1.29
C9orf85-201ENST00000334731 PRR3P79522 188 aaKnown RBP7□□□□□ -1.29
C9orf85-201ENST00000334731 GAGE2BQ13066 116 aa7□□□□□ -1.29
C9orf85-201ENST00000334731 ORMDL2Q53FV1 153 aa7□□□□□ -1.29
C9orf85-201ENST00000334731 Q8N8P6 123 aa7□□□□□ -1.29
C9orf85-201ENST00000334731 CAMK2N2Q96S95 79 aa7□□□□□ -1.29
C9orf85-201ENST00000334731 A0A096LNJ9 63 aa6.99□□□□□ -1.29
C9orf85-201ENST00000334731 PYGO1Q9Y3Y4 419 aa6.99□□□□□ -1.29
C9orf85-201ENST00000334731 A0A1W2PNN7 141 aa6.98□□□□□ -1.29
C9orf85-201ENST00000334731 LINC01546A6NGU7 62 aa6.98□□□□□ -1.29
C9orf85-201ENST00000334731 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.98□□□□□ -1.29
C9orf85-201ENST00000334731 SPAG11BQ08648 103 aa6.98□□□□□ -1.29
C9orf85-201ENST00000334731 CEND1Q8N111 149 aa6.98□□□□□ -1.29
C9orf85-201ENST00000334731 HIST1H4GQ99525 98 aa6.98□□□□□ -1.29
C9orf85-201ENST00000334731 CYSLTR1Q9Y271 337 aa6.98□□□□□ -1.29
C9orf85-201ENST00000334731 IGLV4-3A0A075B6K6 122 aa6.97□□□□□ -1.29
C9orf85-201ENST00000334731 A0A0J9YXV3 536 aa6.97□□□□□ -1.29
C9orf85-201ENST00000334731 NAA38Q9BRA0 125 aaKnown RBP6.97□□□□□ -1.29
C9orf85-201ENST00000334731 TRAV12-1A0A0B4J245 112 aa6.96□□□□□ -1.3
C9orf85-201ENST00000334731 F8WDY8 70 aa6.96□□□□□ -1.3
C9orf85-201ENST00000334731 FXYD2P54710 66 aa6.96□□□□□ -1.3
C9orf85-201ENST00000334731 GEMIN7Q9H840 131 aaKnown RBP6.96□□□□□ -1.3
C9orf85-201ENST00000334731 MRPL35Q9NZE8 188 aaKnown RBP6.96□□□□□ -1.3
C9orf85-201ENST00000334731 RPL18AQ02543 176 aaKnown RBP6.95□□□□□ -1.3
C9orf85-201ENST00000334731 SRSF9Q13242 221 aaKnown RBP eCLIP6.95□□□□□ -1.3
C9orf85-201ENST00000334731 C9orf116Q5BN46 136 aaPredicted RBP6.95□□□□□ -1.3
C9orf85-201ENST00000334731 LINC00242Q5T6M2 205 aa6.95□□□□□ -1.3
C9orf85-201ENST00000334731 C10orf25Q5T742 122 aa6.95□□□□□ -1.3
C9orf85-201ENST00000334731 Q6ZRP5 223 aa6.95□□□□□ -1.3
C9orf85-201ENST00000334731 PCP2Q8IVA1 136 aa6.95□□□□□ -1.3
C9orf85-201ENST00000334731 TMEM141Q96I45 108 aa6.95□□□□□ -1.3
C9orf85-201ENST00000334731 PLA2G2DQ9UNK4 145 aa6.95□□□□□ -1.3
C9orf85-201ENST00000334731 A0A087WZ39 114 aa6.94□□□□□ -1.3
C9orf85-201ENST00000334731 A0A1B0GWB2 263 aa6.94□□□□□ -1.3
C9orf85-201ENST00000334731 KIAA0087Q14695 138 aa6.94□□□□□ -1.3
C9orf85-201ENST00000334731 ZC2HC1BQ5TFG8 222 aa6.94□□□□□ -1.3
C9orf85-201ENST00000334731 SPINK6Q6UWN8 80 aa6.94□□□□□ -1.3
C9orf85-201ENST00000334731 C2orf66Q6UXQ4 117 aa6.94□□□□□ -1.3
C9orf85-201ENST00000334731 UNQ6190/PRO20217Q6UXQ8 127 aa6.94□□□□□ -1.3
C9orf85-201ENST00000334731 LINC01600Q96MT4 127 aa6.94□□□□□ -1.3
C9orf85-201ENST00000334731 NHP2Q9NX24 153 aaKnown RBP6.94□□□□□ -1.3
C9orf85-201ENST00000334731 HMCN2Q8NDA2 5059 aa6.93□□□□□ -1.3
C9orf85-201ENST00000334731 TRBV20-1A0A075B6N2 111 aa6.93□□□□□ -1.3
C9orf85-201ENST00000334731 F8VRH5 84 aa6.93□□□□□ -1.3
C9orf85-201ENST00000334731 H3BMG7 143 aa6.93□□□□□ -1.3
C9orf85-201ENST00000334731 NDUFA1O15239 70 aa6.93□□□□□ -1.3
C9orf85-201ENST00000334731 UBE2D1P51668 147 aa6.93□□□□□ -1.3
C9orf85-201ENST00000334731 ODF1Q14990 250 aa6.93□□□□□ -1.3
C9orf85-201ENST00000334731 PRO0461Q9UI25 63 aa6.93□□□□□ -1.3
C9orf85-201ENST00000334731 IGIPA6NJ69 53 aa6.92□□□□□ -1.3
C9orf85-201ENST00000334731 TSPAN13O95857 204 aa6.92□□□□□ -1.3
C9orf85-201ENST00000334731 TLX1NBP0CAT3 122 aa6.92□□□□□ -1.3
C9orf85-201ENST00000334731 SCGB1D4Q6XE38 83 aa6.92□□□□□ -1.3
C9orf85-201ENST00000334731 SCGB3A1Q96QR1 104 aa6.92□□□□□ -1.3
C9orf85-201ENST00000334731 AMELXQ99217 191 aa6.92□□□□□ -1.3
C9orf85-201ENST00000334731 C6orf48Q9UBA6 75 aa6.92□□□□□ -1.3
C9orf85-201ENST00000334731 MYMXA0A1B0GTQ4 84 aa6.91□□□□□ -1.3
C9orf85-201ENST00000334731 PHF5AQ7RTV0 110 aaKnown RBP6.91□□□□□ -1.3
C9orf85-201ENST00000334731 LINC01561Q8N1V8 128 aa6.91□□□□□ -1.3
C9orf85-201ENST00000334731 PSORS1C2Q9UIG4 136 aa6.91□□□□□ -1.3
C9orf85-201ENST00000334731 K7ERJ3 54 aa6.9□□□□□ -1.3
C9orf85-201ENST00000334731 KRTAP10-8P60410 259 aa6.9□□□□□ -1.3
C9orf85-201ENST00000334731 ETDBQ3ZM63 59 aa6.9□□□□□ -1.3
C9orf85-201ENST00000334731 REG3GQ6UW15 175 aa6.9□□□□□ -1.3
C9orf85-201ENST00000334731 PPDPFLQ8WWR9 84 aa6.9□□□□□ -1.3
C9orf85-201ENST00000334731 ERG28Q9UKR5 140 aa6.9□□□□□ -1.3
C9orf85-201ENST00000334731 FAM168BA1KXE4 195 aa6.89□□□□□ -1.31
C9orf85-201ENST00000334731 SPINK8P0C7L1 97 aa6.89□□□□□ -1.31
C9orf85-201ENST00000334731 GAGE2EQ4V326 116 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms