RNA–Protein interactions for RNA: ENST00000331491.1

HIST2H3D-201, Transcript of histone cluster 2 H3 family member d, humanhuman

APPRIS P1 BASIC

Gene HIST2H3D, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3D-201ENST00000331491 TRGC2P03986 189 aa9.31□□□□□ -0.92
HIST2H3D-201ENST00000331491 SPAG11AQ6PDA7 123 aa9.31□□□□□ -0.92
HIST2H3D-201ENST00000331491 PLEKHB2Q96CS7 222 aa9.31□□□□□ -0.92
HIST2H3D-201ENST00000331491 CST9LQ9H4G1 147 aa9.31□□□□□ -0.92
HIST2H3D-201ENST00000331491 IGLV5-45A0A087WSX0 123 aa9.3□□□□□ -0.92
HIST2H3D-201ENST00000331491 PMVKQ15126 192 aa9.3□□□□□ -0.92
HIST2H3D-201ENST00000331491 KRTAP13-3Q3SY46 172 aa9.3□□□□□ -0.92
HIST2H3D-201ENST00000331491 FAM19A1Q7Z5A9 133 aa9.3□□□□□ -0.92
HIST2H3D-201ENST00000331491 TMEM126AQ9H061 195 aa9.3□□□□□ -0.92
HIST2H3D-201ENST00000331491 KRTAP4-1Q9BYQ7 146 aa9.29□□□□□ -0.92
HIST2H3D-201ENST00000331491 TINCRA0A1B0GVN0 87 aa9.28□□□□□ -0.92
HIST2H3D-201ENST00000331491 TMEM238C9JI98 176 aa9.28□□□□□ -0.92
HIST2H3D-201ENST00000331491 ATP5LO75964 103 aa9.28□□□□□ -0.92
HIST2H3D-201ENST00000331491 LINC00337Q8N6G1 96 aa9.28□□□□□ -0.92
HIST2H3D-201ENST00000331491 BAGE3Q86Y29 109 aa9.27□□□□□ -0.93
HIST2H3D-201ENST00000331491 M0R378 163 aa9.26□□□□□ -0.93
HIST2H3D-201ENST00000331491 VPREB1P12018 145 aa9.26□□□□□ -0.93
HIST2H3D-201ENST00000331491 PMCHL1Q16048 86 aa9.26□□□□□ -0.93
HIST2H3D-201ENST00000331491 HSBP1O75506 76 aa9.25□□□□□ -0.93
HIST2H3D-201ENST00000331491 SPINK8P0C7L1 97 aa9.24□□□□□ -0.93
HIST2H3D-201ENST00000331491 IGLC3P0DOY3 106 aa9.23□□□□□ -0.93
HIST2H3D-201ENST00000331491 NDUFA6P56556 154 aa9.23□□□□□ -0.93
HIST2H3D-201ENST00000331491 H3BRM9 83 aa9.22□□□□□ -0.93
HIST2H3D-201ENST00000331491 PFN2P35080 140 aa9.22□□□□□ -0.93
HIST2H3D-201ENST00000331491 SEC61BP60468 96 aaKnown RBP9.22□□□□□ -0.93
HIST2H3D-201ENST00000331491 C4orf48Q5BLP8 95 aa9.22□□□□□ -0.93
HIST2H3D-201ENST00000331491 SPRR4Q96PI1 79 aa9.22□□□□□ -0.93
HIST2H3D-201ENST00000331491 HIGD2AQ9BW72 106 aa9.22□□□□□ -0.93
HIST2H3D-201ENST00000331491 SND1-IT1Q9HBX3 110 aa9.22□□□□□ -0.93
HIST2H3D-201ENST00000331491 RPL24P83731 157 aaKnown RBP9.21□□□□□ -0.94
HIST2H3D-201ENST00000331491 IFI27L1Q96BM0 104 aa9.21□□□□□ -0.94
HIST2H3D-201ENST00000331491 TRAV12-1A0A0B4J245 112 aa9.2□□□□□ -0.94
HIST2H3D-201ENST00000331491 SERF1AO75920 110 aa9.2□□□□□ -0.94
HIST2H3D-201ENST00000331491 Q8NDZ9 215 aa9.2□□□□□ -0.94
HIST2H3D-201ENST00000331491 S100A1P23297 94 aa9.19□□□□□ -0.94
HIST2H3D-201ENST00000331491 LINC00310P59036 64 aa9.19□□□□□ -0.94
HIST2H3D-201ENST00000331491 FAM19A2Q8N3H0 131 aa9.19□□□□□ -0.94
HIST2H3D-201ENST00000331491 DAND5Q8N907 189 aa9.18□□□□□ -0.94
HIST2H3D-201ENST00000331491 Q8NBF4 154 aa9.18□□□□□ -0.94
HIST2H3D-201ENST00000331491 IGLV5-39A0A0G2JS06 123 aa9.17□□□□□ -0.94
HIST2H3D-201ENST00000331491 LEPROTL1O95214 131 aa9.17□□□□□ -0.94
HIST2H3D-201ENST00000331491 SPINK1P00995 79 aa9.17□□□□□ -0.94
HIST2H3D-201ENST00000331491 COX17Q14061 63 aa9.17□□□□□ -0.94
HIST2H3D-201ENST00000331491 ERG28Q9UKR5 140 aa9.17□□□□□ -0.94
HIST2H3D-201ENST00000331491 CHTOPQ9Y3Y2 248 aaKnown RBP9.17□□□□□ -0.94
HIST2H3D-201ENST00000331491 HIST1H2BKO60814 126 aa9.16□□□□□ -0.94
HIST2H3D-201ENST00000331491 HIST1H2BJP06899 126 aa9.16□□□□□ -0.94
HIST2H3D-201ENST00000331491 ZNF22P17026 224 aaPredicted RBP9.16□□□□□ -0.94
HIST2H3D-201ENST00000331491 HIST1H2BOP23527 126 aa9.16□□□□□ -0.94
HIST2H3D-201ENST00000331491 HIST1H2BBP33778 126 aa9.16□□□□□ -0.94
HIST2H3D-201ENST00000331491 HIST1H2BDP58876 126 aa9.16□□□□□ -0.94
HIST2H3D-201ENST00000331491 HIST1H2BCP62807 126 aa9.16□□□□□ -0.94
HIST2H3D-201ENST00000331491 HIST2H2BEQ16778 126 aa9.16□□□□□ -0.94
HIST2H3D-201ENST00000331491 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.16□□□□□ -0.94
HIST2H3D-201ENST00000331491 LCE2CQ5TA81 110 aa9.16□□□□□ -0.94
HIST2H3D-201ENST00000331491 HIST1H2BHQ93079 126 aa9.16□□□□□ -0.94
HIST2H3D-201ENST00000331491 HIST1H2BNQ99877 126 aa9.16□□□□□ -0.94
HIST2H3D-201ENST00000331491 HIST1H2BMQ99879 126 aa9.16□□□□□ -0.94
HIST2H3D-201ENST00000331491 ZNF706Q9Y5V0 76 aaPredicted RBP9.16□□□□□ -0.94
HIST2H3D-201ENST00000331491 C11orf86A6NJI1 115 aa9.15□□□□□ -0.94
HIST2H3D-201ENST00000331491 HSPB8Q9UJY1 196 aa9.15□□□□□ -0.94
HIST2H3D-201ENST00000331491 TMEM170BQ5T4T1 132 aa9.13□□□□□ -0.95
HIST2H3D-201ENST00000331491 ATP6V1G1O75348 118 aa9.12□□□□□ -0.95
HIST2H3D-201ENST00000331491 XP32Q5T750 250 aa9.11□□□□□ -0.95
HIST2H3D-201ENST00000331491 SFTA2Q6UW10 78 aa9.11□□□□□ -0.95
HIST2H3D-201ENST00000331491 ZNF625Q96I27 306 aaPredicted RBP9.11□□□□□ -0.95
HIST2H3D-201ENST00000331491 FABP4P15090 132 aa9.1□□□□□ -0.95
HIST2H3D-201ENST00000331491 RPS29P62273 56 aaKnown RBP9.1□□□□□ -0.95
HIST2H3D-201ENST00000331491 NDUFA12Q9UI09 145 aa9.1□□□□□ -0.95
HIST2H3D-201ENST00000331491 TMEM223A0PJW6 202 aa9.09□□□□□ -0.95
HIST2H3D-201ENST00000331491 KRTAP19-2Q3LHN2 52 aa9.09□□□□□ -0.95
HIST2H3D-201ENST00000331491 COA6Q5JTJ3 125 aaKnown RBP9.09□□□□□ -0.95
HIST2H3D-201ENST00000331491 Q8N377 158 aa9.09□□□□□ -0.95
HIST2H3D-201ENST00000331491 PLNP26678 52 aa9.08□□□□□ -0.96
HIST2H3D-201ENST00000331491 LINC00483Q53H64 154 aa9.08□□□□□ -0.96
HIST2H3D-201ENST00000331491 MAP1LC3CQ9BXW4 147 aa9.08□□□□□ -0.96
HIST2H3D-201ENST00000331491 H0Y8G0 127 aa9.07□□□□□ -0.96
HIST2H3D-201ENST00000331491 SPRR1AP35321 89 aa9.07□□□□□ -0.96
HIST2H3D-201ENST00000331491 SMCR5Q8TEV8 140 aa9.07□□□□□ -0.96
HIST2H3D-201ENST00000331491 PRYO14603 147 aa9.06□□□□□ -0.96
HIST2H3D-201ENST00000331491 MT1HP80294 61 aa9.06□□□□□ -0.96
HIST2H3D-201ENST00000331491 KRTAP4-16G5E9R7 235 aaPredicted RBP9.05□□□□□ -0.96
HIST2H3D-201ENST00000331491 DPM2O94777 84 aa9.05□□□□□ -0.96
HIST2H3D-201ENST00000331491 KCNQ1DNQ9H478 68 aa9.04□□□□□ -0.96
HIST2H3D-201ENST00000331491 SYS1-DBNDD2H3BUS1 97 aa9.03□□□□□ -0.96
HIST2H3D-201ENST00000331491 SLC25A20O43772 301 aa9.03□□□□□ -0.96
HIST2H3D-201ENST00000331491 IGKCP01834 107 aa9.03□□□□□ -0.96
HIST2H3D-201ENST00000331491 CFC1BP0CG36 223 aa9.03□□□□□ -0.96
HIST2H3D-201ENST00000331491 LINC00158P58513 81 aa9.03□□□□□ -0.96
HIST2H3D-201ENST00000331491 MOBPQ13875 183 aa9.03□□□□□ -0.96
HIST2H3D-201ENST00000331491 SSBP3-AS1Q7Z2R9 100 aa9.03□□□□□ -0.96
HIST2H3D-201ENST00000331491 ETDCA0A1B0GVM5 59 aa9.01□□□□□ -0.97
HIST2H3D-201ENST00000331491 GAGE2AQ6NT46 116 aa9.01□□□□□ -0.97
HIST2H3D-201ENST00000331491 PET117Q6UWS5 81 aa9.01□□□□□ -0.97
HIST2H3D-201ENST00000331491 IGLV9-49A0A0B4J1Y8 123 aa9□□□□□ -0.97
HIST2H3D-201ENST00000331491 HERVK_113P61574 105 aa9□□□□□ -0.97
HIST2H3D-201ENST00000331491 HERV-K104P63124 156 aa9□□□□□ -0.97
HIST2H3D-201ENST00000331491 PMCHL2Q9BQD1 86 aa9□□□□□ -0.97
HIST2H3D-201ENST00000331491 A0A0U1RRA0 63 aa8.99□□□□□ -0.97
HIST2H3D-201ENST00000331491 LINC00587B1AMM8 73 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms