RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 LINC01547P58512 204 aaPredicted RBP12.43□□□□□ -0.42
CLSTN3-202ENST00000331148 KLKP1Q107X0 134 aa12.43□□□□□ -0.42
CLSTN3-202ENST00000331148 LINC00575Q6W349 94 aa12.42□□□□□ -0.42
CLSTN3-202ENST00000331148 ZNF561-AS1K7EIQ3 104 aa12.42□□□□□ -0.42
CLSTN3-202ENST00000331148 M0R2N4 97 aa12.41□□□□□ -0.42
CLSTN3-202ENST00000331148 TRAV10A0A0B4J240 114 aa12.41□□□□□ -0.42
CLSTN3-202ENST00000331148 CLPSL2Q6UWE3 100 aa12.4□□□□□ -0.42
CLSTN3-202ENST00000331148 F8P00451 2351 aa12.4□□□□□ -0.42
CLSTN3-202ENST00000331148 IGLV1-51P01701 117 aa12.4□□□□□ -0.42
CLSTN3-202ENST00000331148 Q6ZVQ6 151 aa12.4□□□□□ -0.42
CLSTN3-202ENST00000331148 C6orf223Q8N319 242 aa12.4□□□□□ -0.42
CLSTN3-202ENST00000331148 Q8NDZ9 215 aa12.4□□□□□ -0.42
CLSTN3-202ENST00000331148 HAMPP81172 84 aa12.39□□□□□ -0.43
CLSTN3-202ENST00000331148 COX17Q14061 63 aa12.39□□□□□ -0.43
CLSTN3-202ENST00000331148 LAMTOR3Q9UHA4 124 aa12.39□□□□□ -0.43
CLSTN3-202ENST00000331148 SNURFQ9Y675 71 aa12.39□□□□□ -0.43
CLSTN3-202ENST00000331148 NOTCH3Q9UM47 2321 aa12.38□□□□□ -0.43
CLSTN3-202ENST00000331148 KIAA0087Q14695 138 aa12.38□□□□□ -0.43
CLSTN3-202ENST00000331148 RMI2Q96E14 147 aa12.38□□□□□ -0.43
CLSTN3-202ENST00000331148 WFDC10AQ9H1F0 79 aa12.38□□□□□ -0.43
CLSTN3-202ENST00000331148 RPL35AP18077 110 aaKnown RBP12.37□□□□□ -0.43
CLSTN3-202ENST00000331148 CMC4P56277 68 aaPredicted RBP12.37□□□□□ -0.43
CLSTN3-202ENST00000331148 LINC00336Q6ZUF6 198 aa12.37□□□□□ -0.43
CLSTN3-202ENST00000331148 PRO0628Q9UI54 55 aa12.36□□□□□ -0.43
CLSTN3-202ENST00000331148 A0A1B0GUV1 79 aa12.36□□□□□ -0.43
CLSTN3-202ENST00000331148 C9orf116Q5BN46 136 aaPredicted RBP12.36□□□□□ -0.43
CLSTN3-202ENST00000331148 F8WEM9 126 aa12.35□□□□□ -0.43
CLSTN3-202ENST00000331148 CXCL6P80162 114 aa12.35□□□□□ -0.43
CLSTN3-202ENST00000331148 CSNK1G2-AS1Q8NCQ2 148 aa12.35□□□□□ -0.43
CLSTN3-202ENST00000331148 FP248Q71RG6 208 aaPredicted RBP12.33□□□□□ -0.44
CLSTN3-202ENST00000331148 NIPBLQ6KC79 2804 aaeCLIP12.33□□□□□ -0.44
CLSTN3-202ENST00000331148 SMIM26A0A096LP01 95 aa12.32□□□□□ -0.44
CLSTN3-202ENST00000331148 IGHV4-28A0A0C4DH34 117 aa12.32□□□□□ -0.44
CLSTN3-202ENST00000331148 GYPEP15421 78 aa12.32□□□□□ -0.44
CLSTN3-202ENST00000331148 C9orf66Q5T8R8 295 aa12.32□□□□□ -0.44
CLSTN3-202ENST00000331148 SPATA3Q8NHX4 192 aa12.32□□□□□ -0.44
CLSTN3-202ENST00000331148 CD164L2Q6UWJ8 174 aa12.31□□□□□ -0.44
CLSTN3-202ENST00000331148 LINC00269Q8N2A0 174 aa12.31□□□□□ -0.44
CLSTN3-202ENST00000331148 DEFB130BP0DP73 79 aa12.3□□□□□ -0.44
CLSTN3-202ENST00000331148 DEFB130AP0DP74 79 aa12.3□□□□□ -0.44
CLSTN3-202ENST00000331148 PDE6GP18545 87 aa12.3□□□□□ -0.44
CLSTN3-202ENST00000331148 Q8N3U1 123 aa12.3□□□□□ -0.44
CLSTN3-202ENST00000331148 Q6ZQY7 126 aa12.3□□□□□ -0.44
CLSTN3-202ENST00000331148 C19orf73Q9NVV2 129 aa12.29□□□□□ -0.44
CLSTN3-202ENST00000331148 TM2D3Q9BRN9 247 aa12.28□□□□□ -0.44
CLSTN3-202ENST00000331148 JMJD1CQ15652 2540 aa12.28□□□□□ -0.44
CLSTN3-202ENST00000331148 MUC7Q8TAX7 377 aa12.28□□□□□ -0.44
CLSTN3-202ENST00000331148 CHCHD10Q8WYQ3 142 aaPredicted RBP12.28□□□□□ -0.44
CLSTN3-202ENST00000331148 TRBV7-4A0A0J9YYF1 115 aa12.27□□□□□ -0.44
CLSTN3-202ENST00000331148 NDUFC1O43677 76 aa12.27□□□□□ -0.44
CLSTN3-202ENST00000331148 IGLV10-54A0A075B6I4 117 aa12.26□□□□□ -0.45
CLSTN3-202ENST00000331148 A0A096LPF7 62 aa12.26□□□□□ -0.45
CLSTN3-202ENST00000331148 TRBV7-6A0A0J9YX20 115 aa12.26□□□□□ -0.45
CLSTN3-202ENST00000331148 IGLV6-57P01721 117 aa12.26□□□□□ -0.45
CLSTN3-202ENST00000331148 SCXQ7RTU7 201 aa12.26□□□□□ -0.45
CLSTN3-202ENST00000331148 TENM1Q9UKZ4 2725 aa12.25□□□□□ -0.45
CLSTN3-202ENST00000331148 MAST4O15021 2626 aa12.25□□□□□ -0.45
CLSTN3-202ENST00000331148 H3BQ85 93 aa12.25□□□□□ -0.45
CLSTN3-202ENST00000331148 ATP5EP56381 51 aaPredicted RBP12.25□□□□□ -0.45
CLSTN3-202ENST00000331148 TEP1Q99973 2627 aaKnown RBP12.24□□□□□ -0.45
CLSTN3-202ENST00000331148 MIFP14174 115 aa12.23□□□□□ -0.45
CLSTN3-202ENST00000331148 KRTAP24-1Q3LI83 254 aa12.23□□□□□ -0.45
CLSTN3-202ENST00000331148 LINC00474Q9P2X8 69 aa12.23□□□□□ -0.45
CLSTN3-202ENST00000331148 ATRQ13535 2644 aa12.23□□□□□ -0.45
CLSTN3-202ENST00000331148 C10orf25Q5T742 122 aa12.23□□□□□ -0.45
CLSTN3-202ENST00000331148 LINC00612Q8N6U2 182 aa12.23□□□□□ -0.45
CLSTN3-202ENST00000331148 KRTAP21-3Q3LHN1 58 aa12.22□□□□□ -0.45
CLSTN3-202ENST00000331148 NREPQ16612 68 aa12.22□□□□□ -0.45
CLSTN3-202ENST00000331148 UNQ6190/PRO20217Q6UXQ8 127 aa12.21□□□□□ -0.45
CLSTN3-202ENST00000331148 C1orf43Q9BWL3 253 aa12.21□□□□□ -0.45
CLSTN3-202ENST00000331148 REG3AQ06141 175 aa12.21□□□□□ -0.46
CLSTN3-202ENST00000331148 ANGP03950 147 aaKnown RBP12.2□□□□□ -0.46
CLSTN3-202ENST00000331148 PRO0255Q9UI72 69 aa12.2□□□□□ -0.46
CLSTN3-202ENST00000331148 VWFP04275 2813 aa12.19□□□□□ -0.46
CLSTN3-202ENST00000331148 SPAG11BQ08648 103 aa12.18□□□□□ -0.46
CLSTN3-202ENST00000331148 TMEM254Q8TBM7 123 aa12.18□□□□□ -0.46
CLSTN3-202ENST00000331148 DIRC1Q969H9 104 aa12.18□□□□□ -0.46
CLSTN3-202ENST00000331148 BPY2O14599 106 aa12.17□□□□□ -0.46
CLSTN3-202ENST00000331148 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.17□□□□□ -0.46
CLSTN3-202ENST00000331148 A0A0J9YWU9 116 aa12.16□□□□□ -0.46
CLSTN3-202ENST00000331148 ERC2-IT1O76042 136 aa12.16□□□□□ -0.46
CLSTN3-202ENST00000331148 IGHV4-30-4P0DP06 118 aa12.16□□□□□ -0.46
CLSTN3-202ENST00000331148 PKIGQ9Y2B9 76 aa12.14□□□□□ -0.47
CLSTN3-202ENST00000331148 COX7BP24311 80 aa12.13□□□□□ -0.47
CLSTN3-202ENST00000331148 ZNF73O43830 326 aaPredicted RBP12.12□□□□□ -0.47
CLSTN3-202ENST00000331148 FAM229BQ4G0N7 80 aa12.12□□□□□ -0.47
CLSTN3-202ENST00000331148 ELOF1P60002 83 aaKnown RBP12.11□□□□□ -0.47
CLSTN3-202ENST00000331148 Q8N9L7 120 aa12.11□□□□□ -0.47
CLSTN3-202ENST00000331148 FBN1P35555 2871 aaKnown RBP12.1□□□□□ -0.47
CLSTN3-202ENST00000331148 BRK1Q8WUW1 75 aa12.1□□□□□ -0.47
CLSTN3-202ENST00000331148 IGKV4-1P06312 121 aa12.09□□□□□ -0.47
CLSTN3-202ENST00000331148 X6R8D5 127 aa12.09□□□□□ -0.47
CLSTN3-202ENST00000331148 PRYO14603 147 aa12.09□□□□□ -0.47
CLSTN3-202ENST00000331148 A0A0U1RQV1 116 aa12.08□□□□□ -0.48
CLSTN3-202ENST00000331148 XAGE1AQ9HD64 81 aa12.08□□□□□ -0.48
CLSTN3-202ENST00000331148 GVQW2A0A096LPI5 108 aaPredicted RBP12.07□□□□□ -0.48
CLSTN3-202ENST00000331148 OCR1Q9BZK8 76 aa12.07□□□□□ -0.48
CLSTN3-202ENST00000331148 C6orf48Q9UBA6 75 aa12.06□□□□□ -0.48
CLSTN3-202ENST00000331148 TRRAPQ9Y4A5 3859 aa12.06□□□□□ -0.48
CLSTN3-202ENST00000331148 MPLKIPQ8TAP9 179 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms