RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 RPL37AP61513 92 aaKnown RBP4.02□□□□□ -1.77
SMG1-201ENST00000330588 ORMDL3Q8N138 153 aa4.02□□□□□ -1.77
SMG1-201ENST00000330588 PAM16Q9Y3D7 125 aa4.02□□□□□ -1.77
SMG1-201ENST00000330588 PYGO1Q9Y3Y4 419 aa4.02□□□□□ -1.77
SMG1-201ENST00000330588 DPM2O94777 84 aa4.02□□□□□ -1.77
SMG1-201ENST00000330588 KIAA1644Q3SXP7 199 aa4.02□□□□□ -1.77
SMG1-201ENST00000330588 Q6ZVH6 145 aa4.02□□□□□ -1.77
SMG1-201ENST00000330588 C2orf48Q96LS8 159 aa4.02□□□□□ -1.77
SMG1-201ENST00000330588 LRP1BQ9NZR2 4599 aa4.01□□□□□ -1.77
SMG1-201ENST00000330588 A0A087WYN8 130 aa4.01□□□□□ -1.77
SMG1-201ENST00000330588 IGKV3OR2-268A0A0C4DH90 116 aa4.01□□□□□ -1.77
SMG1-201ENST00000330588 IGLV5-39A0A0G2JS06 123 aa4.01□□□□□ -1.77
SMG1-201ENST00000330588 D6R8Y8 96 aa4.01□□□□□ -1.77
SMG1-201ENST00000330588 SMKR1H3BMG3 65 aa4.01□□□□□ -1.77
SMG1-201ENST00000330588 H3BRM9 83 aa4.01□□□□□ -1.77
SMG1-201ENST00000330588 COX7A2LO14548 114 aa4.01□□□□□ -1.77
SMG1-201ENST00000330588 APOMO95445 188 aa4.01□□□□□ -1.77
SMG1-201ENST00000330588 XCL1P47992 114 aa4.01□□□□□ -1.77
SMG1-201ENST00000330588 RPL18AQ02543 176 aaKnown RBP4.01□□□□□ -1.77
SMG1-201ENST00000330588 BVES-AS1Q5T3Y7 98 aa4.01□□□□□ -1.77
SMG1-201ENST00000330588 KRTAP5-11Q6L8G4 156 aa4.01□□□□□ -1.77
SMG1-201ENST00000330588 Q6ZRU5 148 aa4.01□□□□□ -1.77
SMG1-201ENST00000330588 MRPL55Q7Z7F7 128 aaKnown RBP4.01□□□□□ -1.77
SMG1-201ENST00000330588 URB1-AS1Q96HZ7 61 aa4.01□□□□□ -1.77
SMG1-201ENST00000330588 CARD19Q96LW7 228 aa4.01□□□□□ -1.77
SMG1-201ENST00000330588 KRTAP2-2Q9BYT5 123 aa4.01□□□□□ -1.77
SMG1-201ENST00000330588 RYR1P21817 5038 aa4□□□□□ -1.77
SMG1-201ENST00000330588 PCLOQ9Y6V0 5065 aa4□□□□□ -1.77
SMG1-201ENST00000330588 LINC01549A6NIU2 74 aa4□□□□□ -1.77
SMG1-201ENST00000330588 PANO1I0J062 215 aa4□□□□□ -1.77
SMG1-201ENST00000330588 J3QQQ9 107 aa4□□□□□ -1.77
SMG1-201ENST00000330588 NPYP01303 97 aa4□□□□□ -1.77
SMG1-201ENST00000330588 SYCNQ0VAF6 134 aa4□□□□□ -1.77
SMG1-201ENST00000330588 GAGE2BQ13066 116 aa4□□□□□ -1.77
SMG1-201ENST00000330588 GAGE2EQ4V326 116 aa4□□□□□ -1.77
SMG1-201ENST00000330588 SPATA45Q537H7 98 aa4□□□□□ -1.77
SMG1-201ENST00000330588 GAGE2AQ6NT46 116 aa4□□□□□ -1.77
SMG1-201ENST00000330588 ATOH7Q8N100 152 aa4□□□□□ -1.77
SMG1-201ENST00000330588 LINC01561Q8N1V8 128 aa4□□□□□ -1.77
SMG1-201ENST00000330588 C7orf33Q8WU49 177 aa4□□□□□ -1.77
SMG1-201ENST00000330588 PRELID3AQ96N28 172 aa4□□□□□ -1.77
SMG1-201ENST00000330588 GAGE2DQ9UEU5 116 aa4□□□□□ -1.77
SMG1-201ENST00000330588 LAMTOR3Q9UHA4 124 aa4□□□□□ -1.77
SMG1-201ENST00000330588 IGLV4-69A0A075B6H9 119 aa3.99□□□□□ -1.77
SMG1-201ENST00000330588 MT-ATP8P03928 68 aa3.99□□□□□ -1.77
SMG1-201ENST00000330588 KRTAP10-6P60371 365 aaPredicted RBP3.99□□□□□ -1.77
SMG1-201ENST00000330588 COX6A2Q02221 97 aa3.99□□□□□ -1.77
SMG1-201ENST00000330588 PMCHL1Q16048 86 aa3.99□□□□□ -1.77
SMG1-201ENST00000330588 HIGD2BQ4VC39 106 aa3.99□□□□□ -1.77
SMG1-201ENST00000330588 TMEM136Q6ZRR5 245 aa3.99□□□□□ -1.77
SMG1-201ENST00000330588 IGHV3OR16-9A0A0B4J2B5 98 aa3.98□□□□□ -1.77
SMG1-201ENST00000330588 FAM240AA0A1B0GVK7 77 aa3.98□□□□□ -1.77
SMG1-201ENST00000330588 IFI27P40305 119 aaPredicted RBP3.98□□□□□ -1.77
SMG1-201ENST00000330588 NMUP48645 174 aa3.98□□□□□ -1.77
SMG1-201ENST00000330588 TMEM258P61165 79 aa3.98□□□□□ -1.77
SMG1-201ENST00000330588 HERVK_113P63121 156 aa3.98□□□□□ -1.77
SMG1-201ENST00000330588 ORMDL2Q53FV1 153 aa3.98□□□□□ -1.77
SMG1-201ENST00000330588 FAM19A3Q7Z5A8 133 aa3.98□□□□□ -1.77
SMG1-201ENST00000330588 FAM104AQ969W3 186 aa3.98□□□□□ -1.77
SMG1-201ENST00000330588 NXT2Q9NPJ8 142 aaKnown RBP3.98□□□□□ -1.77
SMG1-201ENST00000330588 A0A096LNI7 61 aa3.97□□□□□ -1.77
SMG1-201ENST00000330588 TRAV13-1A0A0B4J241 112 aa3.97□□□□□ -1.77
SMG1-201ENST00000330588 UQCRQO14949 82 aa3.97□□□□□ -1.77
SMG1-201ENST00000330588 IGKV2-30P06310 120 aa3.97□□□□□ -1.77
SMG1-201ENST00000330588 PFN2P35080 140 aa3.97□□□□□ -1.77
SMG1-201ENST00000330588 RPL39P62891 51 aaKnown RBP3.97□□□□□ -1.77
SMG1-201ENST00000330588 PAPPA-AS1Q5QFB9 102 aa3.97□□□□□ -1.77
SMG1-201ENST00000330588 Q8N8P6 123 aa3.97□□□□□ -1.77
SMG1-201ENST00000330588 LINC00526Q96FQ7 95 aa3.97□□□□□ -1.77
SMG1-201ENST00000330588 TMEM141Q96I45 108 aa3.97□□□□□ -1.77
SMG1-201ENST00000330588 MRPL35Q9NZE8 188 aaKnown RBP3.97□□□□□ -1.77
SMG1-201ENST00000330588 APOBP04114 4563 aaKnown RBP3.97□□□□□ -1.77
SMG1-201ENST00000330588 IGLV4-3A0A075B6K6 122 aa3.97□□□□□ -1.77
SMG1-201ENST00000330588 A0A087WZ39 114 aa3.97□□□□□ -1.77
SMG1-201ENST00000330588 TLX1NBP0CAT3 122 aa3.97□□□□□ -1.77
SMG1-201ENST00000330588 CHTF8P0CG12 524 aa3.97□□□□□ -1.77
SMG1-201ENST00000330588 DPH3Q96FX2 82 aa3.97□□□□□ -1.77
SMG1-201ENST00000330588 CAMK2N2Q96S95 79 aa3.97□□□□□ -1.77
SMG1-201ENST00000330588 AMELXQ99217 191 aa3.97□□□□□ -1.77
SMG1-201ENST00000330588 LINC01546A6NGU7 62 aa3.96□□□□□ -1.78
SMG1-201ENST00000330588 NDUFA1O15239 70 aa3.96□□□□□ -1.78
SMG1-201ENST00000330588 MT-ND6P03923 174 aa3.96□□□□□ -1.78
SMG1-201ENST00000330588 PRR3P79522 188 aaKnown RBP3.96□□□□□ -1.78
SMG1-201ENST00000330588 SPAG11BQ08648 103 aa3.96□□□□□ -1.78
SMG1-201ENST00000330588 TIMM17AQ99595 171 aa3.96□□□□□ -1.78
SMG1-201ENST00000330588 GNB1LQ9BYB4 327 aa3.96□□□□□ -1.78
SMG1-201ENST00000330588 SPCS1Q9Y6A9 102 aa3.96□□□□□ -1.78
SMG1-201ENST00000330588 IGKV2-24A0A0C4DH68 120 aa3.95□□□□□ -1.78
SMG1-201ENST00000330588 TRBV30A0A0K0K1B3 111 aa3.95□□□□□ -1.78
SMG1-201ENST00000330588 A0A1W2PPM0 123 aa3.95□□□□□ -1.78
SMG1-201ENST00000330588 FABP2P12104 132 aa3.95□□□□□ -1.78
SMG1-201ENST00000330588 UBE2D1P51668 147 aa3.95□□□□□ -1.78
SMG1-201ENST00000330588 RNASE13Q5GAN3 156 aaKnown RBP3.95□□□□□ -1.78
SMG1-201ENST00000330588 LINC00242Q5T6M2 205 aa3.95□□□□□ -1.78
SMG1-201ENST00000330588 C2orf66Q6UXQ4 117 aa3.95□□□□□ -1.78
SMG1-201ENST00000330588 Q6ZRP5 223 aa3.95□□□□□ -1.78
SMG1-201ENST00000330588 C5orf38Q86SI9 138 aa3.95□□□□□ -1.78
SMG1-201ENST00000330588 C3orf22Q8N5N4 141 aa3.95□□□□□ -1.78
SMG1-201ENST00000330588 PMCHL2Q9BQD1 86 aa3.95□□□□□ -1.78
SMG1-201ENST00000330588 FAM236AA0A1B0GUQ0 79 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms