RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 PRKDCP78527 4128 aaKnown RBP11.18□□□□□ -0.62
DDX41-201ENST00000330503 FAM218AQ96MZ4 157 aa11.17□□□□□ -0.62
DDX41-201ENST00000330503 ANKRD29Q8N6D5 301 aa11.17□□□□□ -0.62
DDX41-201ENST00000330503 CSMD3Q7Z407 3707 aa11.16□□□□□ -0.62
DDX41-201ENST00000330503 TEN1Q86WV5 123 aa11.16□□□□□ -0.62
DDX41-201ENST00000330503 F8WDY8 70 aa11.15□□□□□ -0.62
DDX41-201ENST00000330503 RNF151Q2KHN1 245 aa11.15□□□□□ -0.62
DDX41-201ENST00000330503 CARD19Q96LW7 228 aa11.15□□□□□ -0.62
DDX41-201ENST00000330503 NCR3O14931 201 aa11.15□□□□□ -0.62
DDX41-201ENST00000330503 LYSTQ99698 3801 aa11.15□□□□□ -0.62
DDX41-201ENST00000330503 KRTAP1-5Q9BYS1 174 aa11.14□□□□□ -0.63
DDX41-201ENST00000330503 XAGE1AQ9HD64 81 aa11.14□□□□□ -0.63
DDX41-201ENST00000330503 SYCNQ0VAF6 134 aa11.14□□□□□ -0.63
DDX41-201ENST00000330503 RMI2Q96E14 147 aa11.14□□□□□ -0.63
DDX41-201ENST00000330503 MEGF8Q7Z7M0 2845 aa11.13□□□□□ -0.63
DDX41-201ENST00000330503 USP17L23D6RBM5 183 aa11.13□□□□□ -0.63
DDX41-201ENST00000330503 SLPIP03973 132 aa11.13□□□□□ -0.63
DDX41-201ENST00000330503 DNAH7Q8WXX0 4024 aa11.13□□□□□ -0.63
DDX41-201ENST00000330503 PLECQ15149 4684 aaKnown RBP11.12□□□□□ -0.63
DDX41-201ENST00000330503 TRACP01848 142 aa11.12□□□□□ -0.63
DDX41-201ENST00000330503 TMEM126AQ9H061 195 aa11.12□□□□□ -0.63
DDX41-201ENST00000330503 NDUFC2-KCTD14E9PQ53 114 aa11.11□□□□□ -0.63
DDX41-201ENST00000330503 H0YGX0 51 aa11.11□□□□□ -0.63
DDX41-201ENST00000330503 H3BT86 120 aa11.11□□□□□ -0.63
DDX41-201ENST00000330503 UBE2DNLQ8IWF7 75 aa11.11□□□□□ -0.63
DDX41-201ENST00000330503 PPDPFLQ8WWR9 84 aa11.11□□□□□ -0.63
DDX41-201ENST00000330503 A0A087WYN8 130 aa11.09□□□□□ -0.63
DDX41-201ENST00000330503 Q6ZRP5 223 aa11.09□□□□□ -0.63
DDX41-201ENST00000330503 NUPR2A6NF83 97 aa11.09□□□□□ -0.63
DDX41-201ENST00000330503 RPL18AQ02543 176 aaKnown RBP11.08□□□□□ -0.64
DDX41-201ENST00000330503 IGLV6-57P01721 117 aa11.08□□□□□ -0.64
DDX41-201ENST00000330503 GAGE2EQ4V326 116 aa11.08□□□□□ -0.64
DDX41-201ENST00000330503 GAGE2DQ9UEU5 116 aa11.08□□□□□ -0.64
DDX41-201ENST00000330503 LECT2O14960 151 aa11.07□□□□□ -0.64
DDX41-201ENST00000330503 S100A7L2Q5SY68 101 aa11.07□□□□□ -0.64
DDX41-201ENST00000330503 J3QR89 54 aa11.06□□□□□ -0.64
DDX41-201ENST00000330503 VPREB1P12018 145 aa11.06□□□□□ -0.64
DDX41-201ENST00000330503 VPS25Q9BRG1 176 aa11.06□□□□□ -0.64
DDX41-201ENST00000330503 TENM2Q9NT68 2774 aa11.05□□□□□ -0.64
DDX41-201ENST00000330503 C22orf24Q9Y442 160 aa11.05□□□□□ -0.64
DDX41-201ENST00000330503 TEX49A0A1B0GTD5 131 aa11.05□□□□□ -0.64
DDX41-201ENST00000330503 BAALC-AS2P0C853 105 aa11.05□□□□□ -0.64
DDX41-201ENST00000330503 KRTAP21-3Q3LHN1 58 aa11.05□□□□□ -0.64
DDX41-201ENST00000330503 C9orf129Q5T035 196 aaKnown RBP11.05□□□□□ -0.64
DDX41-201ENST00000330503 DNAH10Q8IVF4 4471 aa11.04□□□□□ -0.64
DDX41-201ENST00000330503 TLX1NBP0CAT3 122 aa11.04□□□□□ -0.64
DDX41-201ENST00000330503 TRBV10-3A0A0K0K1G6 114 aa11.03□□□□□ -0.64
DDX41-201ENST00000330503 C6orf99Q4VX62 202 aa11.03□□□□□ -0.64
DDX41-201ENST00000330503 STARD9Q9P2P6 4700 aa11.02□□□□□ -0.64
DDX41-201ENST00000330503 SVIPQ8NHG7 77 aa11.02□□□□□ -0.65
DDX41-201ENST00000330503 VPS13DQ5THJ4 4388 aa11□□□□□ -0.65
DDX41-201ENST00000330503 M0R378 163 aa11□□□□□ -0.65
DDX41-201ENST00000330503 LINC00167Q96N53 147 aa10.99□□□□□ -0.65
DDX41-201ENST00000330503 NBDYA0A0U1RRE5 68 aa10.98□□□□□ -0.65
DDX41-201ENST00000330503 DNAL4O96015 105 aa10.98□□□□□ -0.65
DDX41-201ENST00000330503 C21orf62-AS1Q17RA5 79 aa10.98□□□□□ -0.65
DDX41-201ENST00000330503 SERTAD4-AS1Q5TG53 156 aa10.97□□□□□ -0.65
DDX41-201ENST00000330503 Q8N814 137 aa10.97□□□□□ -0.65
DDX41-201ENST00000330503 TRAV23DV6A0A075B6W5 121 aa10.97□□□□□ -0.65
DDX41-201ENST00000330503 A0A1B0GX51 115 aa10.97□□□□□ -0.65
DDX41-201ENST00000330503 LINC00575Q6W349 94 aa10.96□□□□□ -0.65
DDX41-201ENST00000330503 CBY1Q9Y3M2 126 aa10.96□□□□□ -0.65
DDX41-201ENST00000330503 PSCAO43653 123 aa10.96□□□□□ -0.66
DDX41-201ENST00000330503 PLA2G2DQ9UNK4 145 aa10.95□□□□□ -0.66
DDX41-201ENST00000330503 CDIP1Q9H305 208 aa10.94□□□□□ -0.66
DDX41-201ENST00000330503 TTC32Q5I0X7 151 aa10.94□□□□□ -0.66
DDX41-201ENST00000330503 ZNF73O43830 326 aaPredicted RBP10.93□□□□□ -0.66
DDX41-201ENST00000330503 GAGE2BQ13066 116 aa10.93□□□□□ -0.66
DDX41-201ENST00000330503 LOC107984640A0A0U1RRK4 108 aa10.93□□□□□ -0.66
DDX41-201ENST00000330503 FAM168BA1KXE4 195 aa10.93□□□□□ -0.66
DDX41-201ENST00000330503 KRTAP7-1Q8IUC3 87 aa10.93□□□□□ -0.66
DDX41-201ENST00000330503 CNBPP62633 177 aaKnown RBP10.92□□□□□ -0.66
DDX41-201ENST00000330503 DIRC1Q969H9 104 aa10.92□□□□□ -0.66
DDX41-201ENST00000330503 Q6ZRN7 208 aaPredicted RBP10.91□□□□□ -0.66
DDX41-201ENST00000330503 C7orf33Q8WU49 177 aa10.91□□□□□ -0.66
DDX41-201ENST00000330503 ORMDL1Q9P0S3 153 aa10.91□□□□□ -0.66
DDX41-201ENST00000330503 LRCOL1A6NCL2 159 aa10.91□□□□□ -0.66
DDX41-201ENST00000330503 PCP4P48539 62 aa10.91□□□□□ -0.66
DDX41-201ENST00000330503 IGLV5-37A0A075B6J1 123 aa10.9□□□□□ -0.66
DDX41-201ENST00000330503 NKAPP1Q8N9T2 125 aa10.9□□□□□ -0.66
DDX41-201ENST00000330503 FBN3Q75N90 2809 aa10.9□□□□□ -0.67
DDX41-201ENST00000330503 hADV29S1A0JD25 119 aa10.9□□□□□ -0.67
DDX41-201ENST00000330503 TRBV7-6A0A0J9YX20 115 aa10.89□□□□□ -0.67
DDX41-201ENST00000330503 COX7BP24311 80 aa10.88□□□□□ -0.67
DDX41-201ENST00000330503 M0R2N4 97 aa10.88□□□□□ -0.67
DDX41-201ENST00000330503 ELOF1P60002 83 aaKnown RBP10.88□□□□□ -0.67
DDX41-201ENST00000330503 OBSCN-AS1Q96MR7 158 aa10.88□□□□□ -0.67
DDX41-201ENST00000330503 KCNQ1DNQ9H478 68 aa10.88□□□□□ -0.67
DDX41-201ENST00000330503 C14orf177Q52M58 125 aa10.87□□□□□ -0.67
DDX41-201ENST00000330503 SNCGO76070 127 aa10.87□□□□□ -0.67
DDX41-201ENST00000330503 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.86□□□□□ -0.67
DDX41-201ENST00000330503 SIGMAR1Q99720 223 aa10.85□□□□□ -0.67
DDX41-201ENST00000330503 A0A096LNI7 61 aa10.84□□□□□ -0.67
DDX41-201ENST00000330503 TMEM256-PLSCR3K7ERE1 68 aa10.84□□□□□ -0.67
DDX41-201ENST00000330503 FAM19A5Q7Z5A7 132 aaPredicted RBP10.84□□□□□ -0.67
DDX41-201ENST00000330503 LINC00528Q8N1L1 170 aa10.84□□□□□ -0.67
DDX41-201ENST00000330503 IGLV1-50A0A075B6I6 118 aa10.83□□□□□ -0.68
DDX41-201ENST00000330503 RPL37AP8A6NKH3 93 aa10.83□□□□□ -0.68
DDX41-201ENST00000330503 C16orf90A8MZG2 172 aa10.83□□□□□ -0.68
DDX41-201ENST00000330503 INAFM2P0DMQ5 153 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms