RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 ORMDL1Q9P0S3 153 aa9.77□□□□□ -0.84
TPM3-206ENST00000330188 ANK2Q01484 3957 aa9.77□□□□□ -0.85
TPM3-206ENST00000330188 NDUFV3P56181 108 aaKnown RBP9.77□□□□□ -0.85
TPM3-206ENST00000330188 GAGE2AQ6NT46 116 aa9.77□□□□□ -0.85
TPM3-206ENST00000330188 Q8N814 137 aa9.76□□□□□ -0.85
TPM3-206ENST00000330188 C6orf48Q9UBA6 75 aa9.76□□□□□ -0.85
TPM3-206ENST00000330188 NHLRC4P0CG21 123 aaPredicted RBP9.76□□□□□ -0.85
TPM3-206ENST00000330188 KRTAP26-1Q6PEX3 210 aa9.76□□□□□ -0.85
TPM3-206ENST00000330188 C14orf132Q9NPU4 83 aa9.76□□□□□ -0.85
TPM3-206ENST00000330188 ESRGQ1W209 222 aa9.75□□□□□ -0.85
TPM3-206ENST00000330188 C6orf99Q4VX62 202 aa9.75□□□□□ -0.85
TPM3-206ENST00000330188 S100A7L2Q5SY68 101 aa9.75□□□□□ -0.85
TPM3-206ENST00000330188 LINC00643Q86TS7 51 aa9.75□□□□□ -0.85
TPM3-206ENST00000330188 C4orf48Q5BLP8 95 aa9.74□□□□□ -0.85
TPM3-206ENST00000330188 DNAH3Q8TD57 4116 aa9.73□□□□□ -0.85
TPM3-206ENST00000330188 HIGD2BQ4VC39 106 aa9.72□□□□□ -0.85
TPM3-206ENST00000330188 DEFB131BA0A096LNP1 70 aa9.71□□□□□ -0.85
TPM3-206ENST00000330188 IGLV6-57P01721 117 aa9.71□□□□□ -0.85
TPM3-206ENST00000330188 RPL18AQ02543 176 aaKnown RBP9.71□□□□□ -0.85
TPM3-206ENST00000330188 IMUPQ9GZP8 106 aa9.71□□□□□ -0.85
TPM3-206ENST00000330188 FBN1P35555 2871 aaKnown RBP9.71□□□□□ -0.85
TPM3-206ENST00000330188 ZNF561-AS1K7EIQ3 104 aa9.71□□□□□ -0.86
TPM3-206ENST00000330188 C11orf45Q8TAV5 145 aa9.71□□□□□ -0.86
TPM3-206ENST00000330188 LINC00575Q6W349 94 aa9.7□□□□□ -0.86
TPM3-206ENST00000330188 C15orf56Q8N910 161 aa9.7□□□□□ -0.86
TPM3-206ENST00000330188 CAMK2N2Q96S95 79 aa9.7□□□□□ -0.86
TPM3-206ENST00000330188 XAGE1AQ9HD64 81 aa9.7□□□□□ -0.86
TPM3-206ENST00000330188 TMEM256-PLSCR3K7ERE1 68 aa9.69□□□□□ -0.86
TPM3-206ENST00000330188 LINC01556Q5JQF7 62 aa9.68□□□□□ -0.86
TPM3-206ENST00000330188 TENM3Q9P273 2699 aa9.67□□□□□ -0.86
TPM3-206ENST00000330188 Q6ZRU5 148 aa9.67□□□□□ -0.86
TPM3-206ENST00000330188 TRBV10-3A0A0K0K1G6 114 aa9.67□□□□□ -0.86
TPM3-206ENST00000330188 JMJD7-PLA2G4BH0Y9G9 81 aa9.67□□□□□ -0.86
TPM3-206ENST00000330188 C1orf43Q9BWL3 253 aa9.67□□□□□ -0.86
TPM3-206ENST00000330188 C2orf48Q96LS8 159 aa9.66□□□□□ -0.86
TPM3-206ENST00000330188 LINC00846Q9NV44 126 aa9.66□□□□□ -0.86
TPM3-206ENST00000330188 PKD1L1Q8TDX9 2849 aa9.66□□□□□ -0.86
TPM3-206ENST00000330188 hADV29S1A0JD25 119 aa9.65□□□□□ -0.86
TPM3-206ENST00000330188 STAB1Q9NY15 2570 aa9.65□□□□□ -0.86
TPM3-206ENST00000330188 CCKP06307 115 aa9.65□□□□□ -0.86
TPM3-206ENST00000330188 TRAV23DV6A0A075B6W5 121 aa9.64□□□□□ -0.87
TPM3-206ENST00000330188 IGKV2D-24A0A075B6R9 120 aa9.64□□□□□ -0.87
TPM3-206ENST00000330188 FAM236AA0A1B0GUQ0 79 aa9.64□□□□□ -0.87
TPM3-206ENST00000330188 FAM236BA0A1B0GV22 79 aa9.64□□□□□ -0.87
TPM3-206ENST00000330188 VPREB1P12018 145 aa9.64□□□□□ -0.87
TPM3-206ENST00000330188 NDUFC2-KCTD14E9PQ53 114 aa9.63□□□□□ -0.87
TPM3-206ENST00000330188 DIRC1Q969H9 104 aa9.62□□□□□ -0.87
TPM3-206ENST00000330188 CCDC179H3BU77 68 aa9.62□□□□□ -0.87
TPM3-206ENST00000330188 DNAH10OSP0CZ25 163 aa9.62□□□□□ -0.87
TPM3-206ENST00000330188 PRB2P02812 416 aaPredicted RBP9.61□□□□□ -0.87
TPM3-206ENST00000330188 TRAV10A0A0B4J240 114 aa9.6□□□□□ -0.87
TPM3-206ENST00000330188 ZNF73O43830 326 aaPredicted RBP9.6□□□□□ -0.87
TPM3-206ENST00000330188 Q6JHZ5 121 aa9.6□□□□□ -0.87
TPM3-206ENST00000330188 F8WDY8 70 aa9.59□□□□□ -0.87
TPM3-206ENST00000330188 M0R378 163 aa9.59□□□□□ -0.87
TPM3-206ENST00000330188 Q6ZQY7 126 aa9.59□□□□□ -0.87
TPM3-206ENST00000330188 Q6ZRP5 223 aa9.59□□□□□ -0.87
TPM3-206ENST00000330188 TM2D3Q9BRN9 247 aa9.59□□□□□ -0.87
TPM3-206ENST00000330188 MAST4O15021 2626 aa9.58□□□□□ -0.88
TPM3-206ENST00000330188 IGKV3D-7A0A0C4DH55 119 aa9.58□□□□□ -0.88
TPM3-206ENST00000330188 COX7BP24311 80 aa9.58□□□□□ -0.88
TPM3-206ENST00000330188 ELOF1P60002 83 aaKnown RBP9.58□□□□□ -0.88
TPM3-206ENST00000330188 SYCNQ0VAF6 134 aa9.58□□□□□ -0.88
TPM3-206ENST00000330188 LINC00588Q9Y4M8 146 aa9.57□□□□□ -0.88
TPM3-206ENST00000330188 TRBV7-6A0A0J9YX20 115 aa9.56□□□□□ -0.88
TPM3-206ENST00000330188 B5MCH6 92 aa9.56□□□□□ -0.88
TPM3-206ENST00000330188 RBM3P98179 157 aaKnown RBP9.56□□□□□ -0.88
TPM3-206ENST00000330188 LAMTOR3Q9UHA4 124 aa9.56□□□□□ -0.88
TPM3-206ENST00000330188 K7EIL1 84 aa9.55□□□□□ -0.88
TPM3-206ENST00000330188 HUWE1Q7Z6Z7 4374 aaKnown RBP9.55□□□□□ -0.88
TPM3-206ENST00000330188 H3BQ85 93 aa9.55□□□□□ -0.88
TPM3-206ENST00000330188 Q6ZQT0 140 aa9.55□□□□□ -0.88
TPM3-206ENST00000330188 LOC110117498A0A087WWA1 95 aa9.54□□□□□ -0.88
TPM3-206ENST00000330188 HIST1H4AP62805 103 aaKnown RBP9.54□□□□□ -0.88
TPM3-206ENST00000330188 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.54□□□□□ -0.88
TPM3-206ENST00000330188 MRAPQ8TCY5 172 aa9.54□□□□□ -0.88
TPM3-206ENST00000330188 DNAH1Q9P2D7 4330 aa9.52□□□□□ -0.88
TPM3-206ENST00000330188 CASC10Q5T4H9 136 aa9.51□□□□□ -0.89
TPM3-206ENST00000330188 LINC00528Q8N1L1 170 aa9.51□□□□□ -0.89
TPM3-206ENST00000330188 NOTCH1P46531 2555 aa9.5□□□□□ -0.89
TPM3-206ENST00000330188 USP17L23D6RBM5 183 aa9.5□□□□□ -0.89
TPM3-206ENST00000330188 TLX1NBP0CAT3 122 aa9.5□□□□□ -0.89
TPM3-206ENST00000330188 SERTAD4-AS1Q5TG53 156 aa9.5□□□□□ -0.89
TPM3-206ENST00000330188 A0A087WVE0 104 aa9.49□□□□□ -0.89
TPM3-206ENST00000330188 M0R2N4 97 aa9.49□□□□□ -0.89
TPM3-206ENST00000330188 DSCR8Q96T75 97 aa9.49□□□□□ -0.89
TPM3-206ENST00000330188 SS18L2Q9UHA2 77 aa9.49□□□□□ -0.89
TPM3-206ENST00000330188 ATP5EP2Q5VTU8 51 aa9.48□□□□□ -0.89
TPM3-206ENST00000330188 NKAPP1Q8N9T2 125 aa9.48□□□□□ -0.89
TPM3-206ENST00000330188 UBL5Q9BZL1 73 aa9.48□□□□□ -0.89
TPM3-206ENST00000330188 GHRHP01286 108 aa9.47□□□□□ -0.89
TPM3-206ENST00000330188 KCNQ1DNQ9H478 68 aa9.47□□□□□ -0.89
TPM3-206ENST00000330188 ATOX1O00244 68 aa9.47□□□□□ -0.89
TPM3-206ENST00000330188 C7orf33Q8WU49 177 aa9.47□□□□□ -0.89
TPM3-206ENST00000330188 PDE6GP18545 87 aa9.46□□□□□ -0.89
TPM3-206ENST00000330188 UPK3BQ9BT76 320 aa9.46□□□□□ -0.89
TPM3-206ENST00000330188 PLA2G2DQ9UNK4 145 aa9.46□□□□□ -0.89
TPM3-206ENST00000330188 TRBV7-4A0A0J9YYF1 115 aa9.46□□□□□ -0.9
TPM3-206ENST00000330188 LCE2DQ5TA82 110 aaPredicted RBP9.46□□□□□ -0.9
TPM3-206ENST00000330188 C3orf22Q8N5N4 141 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms