RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 RPL37AP8A6NKH3 93 aa6.98□□□□□ -1.29
COL12A1-201ENST00000322507 COA5Q86WW8 74 aa6.98□□□□□ -1.29
COL12A1-201ENST00000322507 FHL2Q14192 279 aa6.97□□□□□ -1.29
COL12A1-201ENST00000322507 IGLV9-49A0A0B4J1Y8 123 aa6.97□□□□□ -1.29
COL12A1-201ENST00000322507 LINC00482Q8N8I6 264 aa6.96□□□□□ -1.29
COL12A1-201ENST00000322507 BBC3Q96PG8 261 aaPredicted RBP6.96□□□□□ -1.29
COL12A1-201ENST00000322507 C8orf17Q9NRJ1 99 aa6.96□□□□□ -1.3
COL12A1-201ENST00000322507 AMELXQ99217 191 aa6.95□□□□□ -1.3
COL12A1-201ENST00000322507 Q1T7F1 81 aa6.95□□□□□ -1.3
COL12A1-201ENST00000322507 C11orf72Q8NBR9 251 aa6.95□□□□□ -1.3
COL12A1-201ENST00000322507 BPTFQ12830 3046 aa6.94□□□□□ -1.3
COL12A1-201ENST00000322507 GOLGB1Q14789 3259 aaKnown RBP6.94□□□□□ -1.3
COL12A1-201ENST00000322507 LINC00242Q5T6M2 205 aa6.94□□□□□ -1.3
COL12A1-201ENST00000322507 Q8N2B8 174 aa6.93□□□□□ -1.3
COL12A1-201ENST00000322507 SMIM1B2RUZ4 78 aa6.93□□□□□ -1.3
COL12A1-201ENST00000322507 LINC01006Q8NI28 216 aa6.93□□□□□ -1.3
COL12A1-201ENST00000322507 FSHBP01225 129 aa6.93□□□□□ -1.3
COL12A1-201ENST00000322507 EP400Q96L91 3159 aa6.93□□□□□ -1.3
COL12A1-201ENST00000322507 IGKV2D-30A0A075B6S6 120 aa6.92□□□□□ -1.3
COL12A1-201ENST00000322507 IGKV2-30P06310 120 aa6.92□□□□□ -1.3
COL12A1-201ENST00000322507 LYPD5Q6UWN5 251 aa6.92□□□□□ -1.3
COL12A1-201ENST00000322507 EPG5Q9HCE0 2579 aa6.92□□□□□ -1.3
COL12A1-201ENST00000322507 MOBPQ13875 183 aa6.92□□□□□ -1.3
COL12A1-201ENST00000322507 IGLV1-51P01701 117 aa6.92□□□□□ -1.3
COL12A1-201ENST00000322507 C1orf229Q6ZS94 237 aaPredicted RBP6.92□□□□□ -1.3
COL12A1-201ENST00000322507 SEC61BP60468 96 aaKnown RBP6.91□□□□□ -1.3
COL12A1-201ENST00000322507 INAFM1C9JVW0 142 aa6.91□□□□□ -1.3
COL12A1-201ENST00000322507 LINC01546A6NGU7 62 aa6.9□□□□□ -1.3
COL12A1-201ENST00000322507 CHTF8P0CG12 524 aa6.9□□□□□ -1.3
COL12A1-201ENST00000322507 C16orf95Q9H693 158 aa6.9□□□□□ -1.3
COL12A1-201ENST00000322507 SPANXA2-OT1Q8N9U9 137 aa6.9□□□□□ -1.3
COL12A1-201ENST00000322507 PRO0461Q9UI25 63 aa6.9□□□□□ -1.3
COL12A1-201ENST00000322507 LINC00483Q53H64 154 aa6.9□□□□□ -1.3
COL12A1-201ENST00000322507 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.9□□□□□ -1.31
COL12A1-201ENST00000322507 IGLV7-43P04211 117 aa6.9□□□□□ -1.31
COL12A1-201ENST00000322507 IGLV5-45A0A087WSX0 123 aa6.9□□□□□ -1.31
COL12A1-201ENST00000322507 A0A087WSZ3 146 aa6.89□□□□□ -1.31
COL12A1-201ENST00000322507 PRR9Q5T870 116 aa6.89□□□□□ -1.31
COL12A1-201ENST00000322507 EPM2AB3EWF7 344 aa6.89□□□□□ -1.31
COL12A1-201ENST00000322507 KIAA0087Q14695 138 aa6.88□□□□□ -1.31
COL12A1-201ENST00000322507 IGLV8-61A0A075B6I0 122 aa6.88□□□□□ -1.31
COL12A1-201ENST00000322507 C11orf21Q9P2W6 132 aa6.87□□□□□ -1.31
COL12A1-201ENST00000322507 LY6G6DO95868 133 aa6.87□□□□□ -1.31
COL12A1-201ENST00000322507 IGLV7-46A0A075B6I9 117 aa6.87□□□□□ -1.31
COL12A1-201ENST00000322507 CIRBP-AS1Q8TBR5 109 aa6.87□□□□□ -1.31
COL12A1-201ENST00000322507 Q6ZRU5 148 aa6.86□□□□□ -1.31
COL12A1-201ENST00000322507 PROK1P58294 105 aa6.86□□□□□ -1.31
COL12A1-201ENST00000322507 KRTAP16-1A8MUX0 517 aa6.86□□□□□ -1.31
COL12A1-201ENST00000322507 CENPFP49454 3210 aa6.86□□□□□ -1.31
COL12A1-201ENST00000322507 SPATA3Q8NHX4 192 aa6.86□□□□□ -1.31
COL12A1-201ENST00000322507 Q6ZQT0 140 aa6.86□□□□□ -1.31
COL12A1-201ENST00000322507 PRO3102Q9H379 93 aa6.85□□□□□ -1.31
COL12A1-201ENST00000322507 ODF3L2Q3SX64 289 aa6.85□□□□□ -1.31
COL12A1-201ENST00000322507 MAST4O15021 2626 aa6.85□□□□□ -1.31
COL12A1-201ENST00000322507 ADAMTSL4-AS1Q5T5F5 129 aa6.84□□□□□ -1.31
COL12A1-201ENST00000322507 IGLV5-52A0A0A0MRZ9 124 aa6.84□□□□□ -1.31
COL12A1-201ENST00000322507 H7BZZ5 65 aa6.84□□□□□ -1.32
COL12A1-201ENST00000322507 LINC00310P59036 64 aa6.83□□□□□ -1.32
COL12A1-201ENST00000322507 UNQ6190/PRO20217Q6UXQ8 127 aa6.83□□□□□ -1.32
COL12A1-201ENST00000322507 IGLV2-18A0A075B6J9 118 aa6.83□□□□□ -1.32
COL12A1-201ENST00000322507 C10orf142B7Z368 130 aa6.83□□□□□ -1.32
COL12A1-201ENST00000322507 Q75L30 129 aa6.82□□□□□ -1.32
COL12A1-201ENST00000322507 H3BNG1 76 aa6.82□□□□□ -1.32
COL12A1-201ENST00000322507 FLNBO75369 2602 aaKnown RBP6.82□□□□□ -1.32
COL12A1-201ENST00000322507 HECTD1Q9ULT8 2610 aa6.82□□□□□ -1.32
COL12A1-201ENST00000322507 TSPEAR-AS2P59090 65 aa6.81□□□□□ -1.32
COL12A1-201ENST00000322507 C1orf134Q5TEV5 83 aa6.81□□□□□ -1.32
COL12A1-201ENST00000322507 AKAP13Q12802 2813 aa6.81□□□□□ -1.32
COL12A1-201ENST00000322507 FAM229AH3BQW9 127 aa6.81□□□□□ -1.32
COL12A1-201ENST00000322507 CENPEQ02224 2701 aa6.8□□□□□ -1.32
COL12A1-201ENST00000322507 IGLV5-39A0A0G2JS06 123 aa6.8□□□□□ -1.32
COL12A1-201ENST00000322507 ASB16-AS1Q495Z4 193 aa6.8□□□□□ -1.32
COL12A1-201ENST00000322507 SMCPP49901 116 aaPredicted RBP6.8□□□□□ -1.32
COL12A1-201ENST00000322507 ATRQ13535 2644 aa6.8□□□□□ -1.32
COL12A1-201ENST00000322507 APLNQ9ULZ1 77 aa6.79□□□□□ -1.32
COL12A1-201ENST00000322507 LY6G6CO95867 125 aa6.79□□□□□ -1.32
COL12A1-201ENST00000322507 LINC00337Q8N6G1 96 aa6.79□□□□□ -1.32
COL12A1-201ENST00000322507 IGHV3OR16-9A0A0B4J2B5 98 aa6.78□□□□□ -1.32
COL12A1-201ENST00000322507 C6orf223Q8N319 242 aa6.78□□□□□ -1.32
COL12A1-201ENST00000322507 C10orf99Q6UWK7 81 aa6.78□□□□□ -1.32
COL12A1-201ENST00000322507 Q8NBF4 154 aa6.78□□□□□ -1.32
COL12A1-201ENST00000322507 C9orf129Q5T035 196 aaKnown RBP6.78□□□□□ -1.32
COL12A1-201ENST00000322507 RPL37AP61513 92 aaKnown RBP6.78□□□□□ -1.32
COL12A1-201ENST00000322507 COX6A2Q02221 97 aa6.77□□□□□ -1.33
COL12A1-201ENST00000322507 MGAM2Q2M2H8 2515 aa6.77□□□□□ -1.33
COL12A1-201ENST00000322507 PLA2G2DQ9UNK4 145 aa6.77□□□□□ -1.33
COL12A1-201ENST00000322507 LINC01556Q5JQF7 62 aa6.77□□□□□ -1.33
COL12A1-201ENST00000322507 URB1-AS1Q96HZ7 61 aa6.76□□□□□ -1.33
COL12A1-201ENST00000322507 DEFB116Q30KQ4 102 aa6.76□□□□□ -1.33
COL12A1-201ENST00000322507 A8MWP4 228 aa6.76□□□□□ -1.33
COL12A1-201ENST00000322507 TRBV7-4A0A0J9YYF1 115 aa6.76□□□□□ -1.33
COL12A1-201ENST00000322507 WISP2O76076 250 aa6.76□□□□□ -1.33
COL12A1-201ENST00000322507 GAS8-AS1O95177 125 aa6.75□□□□□ -1.33
COL12A1-201ENST00000322507 FLNAP21333 2647 aaKnown RBP6.75□□□□□ -1.33
COL12A1-201ENST00000322507 IGLV4-60A0A075B6I1 120 aa6.75□□□□□ -1.33
COL12A1-201ENST00000322507 FHL3Q13643 280 aa6.74□□□□□ -1.33
COL12A1-201ENST00000322507 CDSNQ15517 529 aa6.74□□□□□ -1.33
COL12A1-201ENST00000322507 LINC00313P59037 77 aa6.74□□□□□ -1.33
COL12A1-201ENST00000322507 A0A096LNJ9 63 aa6.73□□□□□ -1.33
COL12A1-201ENST00000322507 C18orf65Q6ZTR6 163 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms