RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 H0YGX0 51 aa10.72□□□□□ -0.69
SHROOM1-201ENST00000319854 DAD1P61803 113 aa10.72□□□□□ -0.69
SHROOM1-201ENST00000319854 LINC00959A0A1B0GUT2 108 aa10.71□□□□□ -0.69
SHROOM1-201ENST00000319854 OXLD1Q5BKU9 147 aa10.71□□□□□ -0.69
SHROOM1-201ENST00000319854 C6orf226Q5I0X4 101 aa10.71□□□□□ -0.69
SHROOM1-201ENST00000319854 LINC00269Q8N2A0 174 aa10.71□□□□□ -0.69
SHROOM1-201ENST00000319854 IGHV3OR16-9A0A0B4J2B5 98 aa10.7□□□□□ -0.7
SHROOM1-201ENST00000319854 GHRHP01286 108 aa10.7□□□□□ -0.7
SHROOM1-201ENST00000319854 CCKP06307 115 aa10.7□□□□□ -0.7
SHROOM1-201ENST00000319854 ANGP03950 147 aaKnown RBP10.69□□□□□ -0.7
SHROOM1-201ENST00000319854 IGHV4-30-4P0DP06 118 aa10.68□□□□□ -0.7
SHROOM1-201ENST00000319854 ENHOQ6UWT2 76 aa10.68□□□□□ -0.7
SHROOM1-201ENST00000319854 RETNQ9HD89 108 aa10.67□□□□□ -0.7
SHROOM1-201ENST00000319854 APOC4P55056 127 aa10.67□□□□□ -0.7
SHROOM1-201ENST00000319854 PRR3P79522 188 aaKnown RBP10.67□□□□□ -0.7
SHROOM1-201ENST00000319854 C1orf43Q9BWL3 253 aa10.67□□□□□ -0.7
SHROOM1-201ENST00000319854 ORMDL1Q9P0S3 153 aa10.67□□□□□ -0.7
SHROOM1-201ENST00000319854 MRAPQ8TCY5 172 aa10.66□□□□□ -0.7
SHROOM1-201ENST00000319854 C20orf197Q8N268 126 aa10.66□□□□□ -0.7
SHROOM1-201ENST00000319854 ANK2Q01484 3957 aa10.66□□□□□ -0.7
SHROOM1-201ENST00000319854 A0A087WZ39 114 aa10.65□□□□□ -0.71
SHROOM1-201ENST00000319854 LINC00612Q8N6U2 182 aa10.64□□□□□ -0.71
SHROOM1-201ENST00000319854 PKIGQ9Y2B9 76 aa10.64□□□□□ -0.71
SHROOM1-201ENST00000319854 C9orf116Q5BN46 136 aaPredicted RBP10.63□□□□□ -0.71
SHROOM1-201ENST00000319854 IBA57-AS1B1ANH7 110 aa10.63□□□□□ -0.71
SHROOM1-201ENST00000319854 MGAM2Q2M2H8 2515 aa10.63□□□□□ -0.71
SHROOM1-201ENST00000319854 LYRM9A8MSI8 78 aa10.63□□□□□ -0.71
SHROOM1-201ENST00000319854 NANOS2P60321 138 aaKnown RBP10.62□□□□□ -0.71
SHROOM1-201ENST00000319854 Q8NAQ8 132 aa10.62□□□□□ -0.71
SHROOM1-201ENST00000319854 CHCHD10Q8WYQ3 142 aaPredicted RBP10.61□□□□□ -0.71
SHROOM1-201ENST00000319854 REG3AQ06141 175 aa10.6□□□□□ -0.71
SHROOM1-201ENST00000319854 SPART-AS1P0CW21 52 aa10.6□□□□□ -0.71
SHROOM1-201ENST00000319854 LYPD5Q6UWN5 251 aa10.6□□□□□ -0.71
SHROOM1-201ENST00000319854 Q8N814 137 aa10.6□□□□□ -0.71
SHROOM1-201ENST00000319854 KLK12Q9UKR0 248 aa10.59□□□□□ -0.71
SHROOM1-201ENST00000319854 NDUFC2O95298 119 aa10.59□□□□□ -0.71
SHROOM1-201ENST00000319854 LINC00167Q96N53 147 aa10.59□□□□□ -0.71
SHROOM1-201ENST00000319854 M0R2N4 97 aa10.58□□□□□ -0.72
SHROOM1-201ENST00000319854 LINC00336Q6ZUF6 198 aa10.57□□□□□ -0.72
SHROOM1-201ENST00000319854 C6orf223Q8N319 242 aa10.57□□□□□ -0.72
SHROOM1-201ENST00000319854 A0A1B0GUV1 79 aa10.57□□□□□ -0.72
SHROOM1-201ENST00000319854 JMJD7-PLA2G4BH0Y9G9 81 aa10.57□□□□□ -0.72
SHROOM1-201ENST00000319854 H7BZZ5 65 aa10.57□□□□□ -0.72
SHROOM1-201ENST00000319854 FAM236DA0A1B0GTK5 79 aa10.56□□□□□ -0.72
SHROOM1-201ENST00000319854 PRB2P02812 416 aaPredicted RBP10.56□□□□□ -0.72
SHROOM1-201ENST00000319854 FAM236CP0DP71 79 aa10.56□□□□□ -0.72
SHROOM1-201ENST00000319854 MIFP14174 115 aa10.56□□□□□ -0.72
SHROOM1-201ENST00000319854 S100A7L2Q5SY68 101 aa10.56□□□□□ -0.72
SHROOM1-201ENST00000319854 NDUFC2-KCTD14E9PQ53 114 aa10.55□□□□□ -0.72
SHROOM1-201ENST00000319854 F8WDY8 70 aa10.55□□□□□ -0.72
SHROOM1-201ENST00000319854 KRTAP10-11P60412 298 aa10.55□□□□□ -0.72
SHROOM1-201ENST00000319854 PRO0628Q9UI54 55 aa10.55□□□□□ -0.72
SHROOM1-201ENST00000319854 TMEM256-PLSCR3K7ERE1 68 aa10.54□□□□□ -0.72
SHROOM1-201ENST00000319854 ATP5EP2Q5VTU8 51 aa10.54□□□□□ -0.72
SHROOM1-201ENST00000319854 TRAV10A0A0B4J240 114 aa10.54□□□□□ -0.72
SHROOM1-201ENST00000319854 SNURFQ9Y675 71 aa10.54□□□□□ -0.72
SHROOM1-201ENST00000319854 UBL5Q9BZL1 73 aa10.53□□□□□ -0.72
SHROOM1-201ENST00000319854 EPM2AB3EWF7 344 aa10.53□□□□□ -0.72
SHROOM1-201ENST00000319854 CD164L2Q6UWJ8 174 aa10.53□□□□□ -0.72
SHROOM1-201ENST00000319854 Q8NDZ9 215 aa10.53□□□□□ -0.72
SHROOM1-201ENST00000319854 KRTAP24-1Q3LI83 254 aa10.52□□□□□ -0.73
SHROOM1-201ENST00000319854 C10orf25Q5T742 122 aa10.52□□□□□ -0.73
SHROOM1-201ENST00000319854 BAHCC1Q9P281 2608 aa10.52□□□□□ -0.73
SHROOM1-201ENST00000319854 UNQ6190/PRO20217Q6UXQ8 127 aa10.51□□□□□ -0.73
SHROOM1-201ENST00000319854 Q6ZTC4 211 aa10.51□□□□□ -0.73
SHROOM1-201ENST00000319854 RMI2Q96E14 147 aa10.51□□□□□ -0.73
SHROOM1-201ENST00000319854 Q8IZM0 81 aa10.51□□□□□ -0.73
SHROOM1-201ENST00000319854 TRBV10-3A0A0K0K1G6 114 aa10.5□□□□□ -0.73
SHROOM1-201ENST00000319854 C6orf99Q4VX62 202 aa10.5□□□□□ -0.73
SHROOM1-201ENST00000319854 Q6ZQT0 140 aa10.49□□□□□ -0.73
SHROOM1-201ENST00000319854 SERP1Q9Y6X1 66 aa10.49□□□□□ -0.73
SHROOM1-201ENST00000319854 KIAA0087Q14695 138 aa10.49□□□□□ -0.73
SHROOM1-201ENST00000319854 WFDC10BQ8IUB3 73 aa10.49□□□□□ -0.73
SHROOM1-201ENST00000319854 TRAV7A0A075B6U4 112 aa10.48□□□□□ -0.73
SHROOM1-201ENST00000319854 LINC01547P58512 204 aaPredicted RBP10.48□□□□□ -0.73
SHROOM1-201ENST00000319854 HAMPP81172 84 aa10.48□□□□□ -0.73
SHROOM1-201ENST00000319854 SEC61GP60059 68 aa10.48□□□□□ -0.73
SHROOM1-201ENST00000319854 SPAG11BQ08648 103 aa10.48□□□□□ -0.73
SHROOM1-201ENST00000319854 FP248Q71RG6 208 aaPredicted RBP10.47□□□□□ -0.73
SHROOM1-201ENST00000319854 LELP1Q5T871 98 aa10.47□□□□□ -0.73
SHROOM1-201ENST00000319854 A0A0U1RQV1 116 aa10.47□□□□□ -0.73
SHROOM1-201ENST00000319854 HIGD2BQ4VC39 106 aa10.47□□□□□ -0.73
SHROOM1-201ENST00000319854 KPRPQ5T749 579 aaPredicted RBP10.47□□□□□ -0.73
SHROOM1-201ENST00000319854 RBM3P98179 157 aaKnown RBP10.46□□□□□ -0.74
SHROOM1-201ENST00000319854 F8WEM9 126 aa10.45□□□□□ -0.74
SHROOM1-201ENST00000319854 Q6ZVQ6 151 aa10.45□□□□□ -0.74
SHROOM1-201ENST00000319854 XAGE1AQ9HD64 81 aa10.45□□□□□ -0.74
SHROOM1-201ENST00000319854 A0A0J9YWU9 116 aa10.45□□□□□ -0.74
SHROOM1-201ENST00000319854 CYSRT1A8MQ03 144 aa10.45□□□□□ -0.74
SHROOM1-201ENST00000319854 KLKP1Q107X0 134 aa10.45□□□□□ -0.74
SHROOM1-201ENST00000319854 LINC00575Q6W349 94 aa10.44□□□□□ -0.74
SHROOM1-201ENST00000319854 LINC00474Q9P2X8 69 aa10.44□□□□□ -0.74
SHROOM1-201ENST00000319854 LAMTOR3Q9UHA4 124 aa10.44□□□□□ -0.74
SHROOM1-201ENST00000319854 SCXQ7RTU7 201 aa10.43□□□□□ -0.74
SHROOM1-201ENST00000319854 STAB2Q8WWQ8 2551 aa10.43□□□□□ -0.74
SHROOM1-201ENST00000319854 TM2D3Q9BRN9 247 aa10.42□□□□□ -0.74
SHROOM1-201ENST00000319854 V9GYY9 64 aa10.41□□□□□ -0.74
SHROOM1-201ENST00000319854 LOC110117498A0A087WWA1 95 aa10.4□□□□□ -0.75
SHROOM1-201ENST00000319854 TENM2Q9NT68 2774 aa10.39□□□□□ -0.75
SHROOM1-201ENST00000319854 ZNF561-AS1K7EIQ3 104 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms