RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 IMUPQ9GZP8 106 aa13.88□□□□□ -0.19
TTC39C-202ENST00000317571 NDUFC2O95298 119 aa13.87□□□□□ -0.19
TTC39C-202ENST00000317571 CYSRT1A8MQ03 144 aa13.86□□□□□ -0.19
TTC39C-202ENST00000317571 SLPIP03973 132 aa13.86□□□□□ -0.19
TTC39C-202ENST00000317571 FAM236AA0A1B0GUQ0 79 aa13.86□□□□□ -0.19
TTC39C-202ENST00000317571 FAM236BA0A1B0GV22 79 aa13.86□□□□□ -0.19
TTC39C-202ENST00000317571 NCR3O14931 201 aa13.85□□□□□ -0.19
TTC39C-202ENST00000317571 C14orf132Q9NPU4 83 aa13.84□□□□□ -0.19
TTC39C-202ENST00000317571 A0A0J9YWU9 116 aa13.83□□□□□ -0.2
TTC39C-202ENST00000317571 H3BNG1 76 aa13.81□□□□□ -0.2
TTC39C-202ENST00000317571 KRTAP26-1Q6PEX3 210 aa13.81□□□□□ -0.2
TTC39C-202ENST00000317571 OBSCN-AS1Q96MR7 158 aa13.81□□□□□ -0.2
TTC39C-202ENST00000317571 C6orf48Q9UBA6 75 aa13.8□□□□□ -0.2
TTC39C-202ENST00000317571 ESRGQ1W209 222 aa13.8□□□□□ -0.2
TTC39C-202ENST00000317571 C3orf56Q8N813 242 aa13.8□□□□□ -0.2
TTC39C-202ENST00000317571 TMEM126AQ9H061 195 aa13.79□□□□□ -0.2
TTC39C-202ENST00000317571 SMIM20Q8N5G0 67 aa13.78□□□□□ -0.2
TTC39C-202ENST00000317571 LINC00167Q96N53 147 aa13.78□□□□□ -0.2
TTC39C-202ENST00000317571 MAST4O15021 2626 aa13.77□□□□□ -0.2
TTC39C-202ENST00000317571 C6orf99Q4VX62 202 aa13.76□□□□□ -0.21
TTC39C-202ENST00000317571 GVQW2A0A096LPI5 108 aaPredicted RBP13.75□□□□□ -0.21
TTC39C-202ENST00000317571 HIGD2BQ4VC39 106 aa13.75□□□□□ -0.21
TTC39C-202ENST00000317571 Q8N814 137 aa13.75□□□□□ -0.21
TTC39C-202ENST00000317571 ORMDL1Q9P0S3 153 aa13.75□□□□□ -0.21
TTC39C-202ENST00000317571 NOTCH1P46531 2555 aa13.74□□□□□ -0.21
TTC39C-202ENST00000317571 XAGE1AQ9HD64 81 aa13.73□□□□□ -0.21
TTC39C-202ENST00000317571 LINC00846Q9NV44 126 aa13.73□□□□□ -0.21
TTC39C-202ENST00000317571 RPL18AQ02543 176 aaKnown RBP13.72□□□□□ -0.21
TTC39C-202ENST00000317571 S100A7L2Q5SY68 101 aa13.72□□□□□ -0.21
TTC39C-202ENST00000317571 C15orf56Q8N910 161 aa13.72□□□□□ -0.21
TTC39C-202ENST00000317571 DEFB131BA0A096LNP1 70 aa13.71□□□□□ -0.21
TTC39C-202ENST00000317571 MUC7Q8TAX7 377 aa13.71□□□□□ -0.21
TTC39C-202ENST00000317571 IGLV6-57P01721 117 aa13.7□□□□□ -0.22
TTC39C-202ENST00000317571 C11orf45Q8TAV5 145 aa13.7□□□□□ -0.22
TTC39C-202ENST00000317571 A0A1B0GX51 115 aa13.69□□□□□ -0.22
TTC39C-202ENST00000317571 PRB2P02812 416 aaPredicted RBP13.69□□□□□ -0.22
TTC39C-202ENST00000317571 IGKV3D-7A0A0C4DH55 119 aa13.68□□□□□ -0.22
TTC39C-202ENST00000317571 BAHCC1Q9P281 2608 aa13.68□□□□□ -0.22
TTC39C-202ENST00000317571 Q6ZRU5 148 aa13.68□□□□□ -0.22
TTC39C-202ENST00000317571 LINC00575Q6W349 94 aa13.67□□□□□ -0.22
TTC39C-202ENST00000317571 CAMK2N2Q96S95 79 aa13.66□□□□□ -0.22
TTC39C-202ENST00000317571 ZNF561-AS1K7EIQ3 104 aa13.66□□□□□ -0.22
TTC39C-202ENST00000317571 HUWE1Q7Z6Z7 4374 aaKnown RBP13.66□□□□□ -0.22
TTC39C-202ENST00000317571 TRBV10-3A0A0K0K1G6 114 aa13.65□□□□□ -0.22
TTC39C-202ENST00000317571 HIST1H4AP62805 103 aaKnown RBP13.65□□□□□ -0.22
TTC39C-202ENST00000317571 LINC01556Q5JQF7 62 aa13.65□□□□□ -0.22
TTC39C-202ENST00000317571 C3orf22Q8N5N4 141 aa13.65□□□□□ -0.22
TTC39C-202ENST00000317571 Q6JHZ5 121 aa13.64□□□□□ -0.23
TTC39C-202ENST00000317571 CCKP06307 115 aa13.64□□□□□ -0.23
TTC39C-202ENST00000317571 COL6A5A8TX70 2615 aa13.63□□□□□ -0.23
TTC39C-202ENST00000317571 NBEAL1Q6ZS30 2694 aa13.62□□□□□ -0.23
TTC39C-202ENST00000317571 TMEM256-PLSCR3K7ERE1 68 aa13.62□□□□□ -0.23
TTC39C-202ENST00000317571 UQCRQO14949 82 aa13.61□□□□□ -0.23
TTC39C-202ENST00000317571 C9orf153Q5TBE3 101 aa13.61□□□□□ -0.23
TTC39C-202ENST00000317571 DNAH1Q9P2D7 4330 aa13.61□□□□□ -0.23
TTC39C-202ENST00000317571 VPREB1P12018 145 aa13.61□□□□□ -0.23
TTC39C-202ENST00000317571 C1orf43Q9BWL3 253 aa13.61□□□□□ -0.23
TTC39C-202ENST00000317571 IGKV2D-24A0A075B6R9 120 aa13.6□□□□□ -0.23
TTC39C-202ENST00000317571 JMJD7-PLA2G4BH0Y9G9 81 aa13.6□□□□□ -0.23
TTC39C-202ENST00000317571 A0A087WVE0 104 aa13.59□□□□□ -0.23
TTC39C-202ENST00000317571 C2orf48Q96LS8 159 aa13.59□□□□□ -0.23
TTC39C-202ENST00000317571 TRAV23DV6A0A075B6W5 121 aa13.58□□□□□ -0.24
TTC39C-202ENST00000317571 hADV29S1A0JD25 119 aa13.58□□□□□ -0.24
TTC39C-202ENST00000317571 ATOX1O00244 68 aa13.57□□□□□ -0.24
TTC39C-202ENST00000317571 COX7CP15954 63 aa13.57□□□□□ -0.24
TTC39C-202ENST00000317571 DNAH10OSP0CZ25 163 aa13.56□□□□□ -0.24
TTC39C-202ENST00000317571 Q6ZRP5 223 aa13.56□□□□□ -0.24
TTC39C-202ENST00000317571 NDUFC2-KCTD14E9PQ53 114 aa13.55□□□□□ -0.24
TTC39C-202ENST00000317571 K7EIL1 84 aa13.54□□□□□ -0.24
TTC39C-202ENST00000317571 LINC00588Q9Y4M8 146 aa13.54□□□□□ -0.24
TTC39C-202ENST00000317571 TM2D3Q9BRN9 247 aa13.54□□□□□ -0.24
TTC39C-202ENST00000317571 Q6ZQY7 126 aa13.53□□□□□ -0.24
TTC39C-202ENST00000317571 MRAPQ8TCY5 172 aa13.53□□□□□ -0.24
TTC39C-202ENST00000317571 ZNF73O43830 326 aaPredicted RBP13.53□□□□□ -0.24
TTC39C-202ENST00000317571 DIRC1Q969H9 104 aa13.53□□□□□ -0.24
TTC39C-202ENST00000317571 CASC10Q5T4H9 136 aa13.52□□□□□ -0.25
TTC39C-202ENST00000317571 TRAV10A0A0B4J240 114 aa13.51□□□□□ -0.25
TTC39C-202ENST00000317571 ELOF1P60002 83 aaKnown RBP13.49□□□□□ -0.25
TTC39C-202ENST00000317571 SYCNQ0VAF6 134 aa13.49□□□□□ -0.25
TTC39C-202ENST00000317571 M0R378 163 aa13.48□□□□□ -0.25
TTC39C-202ENST00000317571 M0R2N4 97 aa13.48□□□□□ -0.25
TTC39C-202ENST00000317571 USP17L23D6RBM5 183 aa13.47□□□□□ -0.25
TTC39C-202ENST00000317571 CRYGAP11844 174 aa13.47□□□□□ -0.25
TTC39C-202ENST00000317571 COX7BP24311 80 aa13.47□□□□□ -0.25
TTC39C-202ENST00000317571 RBM3P98179 157 aaKnown RBP13.45□□□□□ -0.26
TTC39C-202ENST00000317571 Q6ZQT0 140 aa13.45□□□□□ -0.26
TTC39C-202ENST00000317571 SERTAD4-AS1Q5TG53 156 aa13.45□□□□□ -0.26
TTC39C-202ENST00000317571 CYSTM1Q9H1C7 97 aa13.44□□□□□ -0.26
TTC39C-202ENST00000317571 LAMTOR3Q9UHA4 124 aa13.44□□□□□ -0.26
TTC39C-202ENST00000317571 SERP2Q8N6R1 65 aa13.43□□□□□ -0.26
TTC39C-202ENST00000317571 ATP5EP2Q5VTU8 51 aa13.43□□□□□ -0.26
TTC39C-202ENST00000317571 FAM19A1Q7Z5A9 133 aa13.43□□□□□ -0.26
TTC39C-202ENST00000317571 F8WDY8 70 aa13.42□□□□□ -0.26
TTC39C-202ENST00000317571 UBL5Q9BZL1 73 aa13.42□□□□□ -0.26
TTC39C-202ENST00000317571 MGAM2Q2M2H8 2515 aa13.42□□□□□ -0.26
TTC39C-202ENST00000317571 LINC00528Q8N1L1 170 aa13.42□□□□□ -0.26
TTC39C-202ENST00000317571 TRBV7-6A0A0J9YX20 115 aa13.41□□□□□ -0.26
TTC39C-202ENST00000317571 LOC110117498A0A087WWA1 95 aa13.41□□□□□ -0.26
TTC39C-202ENST00000317571 LYSTQ99698 3801 aa13.41□□□□□ -0.26
TTC39C-202ENST00000317571 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms