RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 UPK3BQ9BT76 320 aa9.28□□□□□ -0.92
VAMP2-201ENST00000316509 IGKV2D-24A0A075B6R9 120 aa9.27□□□□□ -0.92
VAMP2-201ENST00000316509 PRB2P02812 416 aaPredicted RBP9.27□□□□□ -0.92
VAMP2-201ENST00000316509 C15orf56Q8N910 161 aa9.27□□□□□ -0.92
VAMP2-201ENST00000316509 MRAPQ8TCY5 172 aa9.27□□□□□ -0.92
VAMP2-201ENST00000316509 LINC00167Q96N53 147 aa9.27□□□□□ -0.92
VAMP2-201ENST00000316509 A0A087WYN8 130 aa9.27□□□□□ -0.93
VAMP2-201ENST00000316509 LINC00526Q96FQ7 95 aa9.27□□□□□ -0.93
VAMP2-201ENST00000316509 LINC00588Q9Y4M8 146 aa9.27□□□□□ -0.93
VAMP2-201ENST00000316509 PRR3P79522 188 aaKnown RBP9.26□□□□□ -0.93
VAMP2-201ENST00000316509 IGLV6-57P01721 117 aa9.26□□□□□ -0.93
VAMP2-201ENST00000316509 LECT2O14960 151 aa9.25□□□□□ -0.93
VAMP2-201ENST00000316509 Q9HAA7 133 aa9.25□□□□□ -0.93
VAMP2-201ENST00000316509 NDUFC2-KCTD14E9PQ53 114 aa9.24□□□□□ -0.93
VAMP2-201ENST00000316509 HIGD2BQ4VC39 106 aa9.24□□□□□ -0.93
VAMP2-201ENST00000316509 ORMDL1Q9P0S3 153 aa9.24□□□□□ -0.93
VAMP2-201ENST00000316509 NCR3O14931 201 aa9.24□□□□□ -0.93
VAMP2-201ENST00000316509 C22orf24Q9Y442 160 aa9.24□□□□□ -0.93
VAMP2-201ENST00000316509 H3BQ85 93 aa9.23□□□□□ -0.93
VAMP2-201ENST00000316509 Q6ZRU5 148 aa9.23□□□□□ -0.93
VAMP2-201ENST00000316509 Q8N814 137 aa9.23□□□□□ -0.93
VAMP2-201ENST00000316509 Q8NDZ9 215 aa9.23□□□□□ -0.93
VAMP2-201ENST00000316509 XGP55808 180 aa9.22□□□□□ -0.93
VAMP2-201ENST00000316509 SYCNQ0VAF6 134 aa9.22□□□□□ -0.93
VAMP2-201ENST00000316509 SVIPQ8NHG7 77 aa9.22□□□□□ -0.93
VAMP2-201ENST00000316509 C6orf99Q4VX62 202 aa9.22□□□□□ -0.93
VAMP2-201ENST00000316509 OBSCN-AS1Q96MR7 158 aa9.22□□□□□ -0.93
VAMP2-201ENST00000316509 TRBV7-6A0A0J9YX20 115 aa9.21□□□□□ -0.94
VAMP2-201ENST00000316509 TMEM256-PLSCR3K7ERE1 68 aa9.21□□□□□ -0.94
VAMP2-201ENST00000316509 M0R378 163 aa9.2□□□□□ -0.94
VAMP2-201ENST00000316509 TLX1NBP0CAT3 122 aa9.2□□□□□ -0.94
VAMP2-201ENST00000316509 RPL18AQ02543 176 aaKnown RBP9.2□□□□□ -0.94
VAMP2-201ENST00000316509 LINC00575Q6W349 94 aa9.2□□□□□ -0.94
VAMP2-201ENST00000316509 B9D2Q9BPU9 175 aa9.2□□□□□ -0.94
VAMP2-201ENST00000316509 MT-ATP8P03928 68 aa9.2□□□□□ -0.94
VAMP2-201ENST00000316509 VPREB1P12018 145 aa9.19□□□□□ -0.94
VAMP2-201ENST00000316509 ANK2Q01484 3957 aa9.19□□□□□ -0.94
VAMP2-201ENST00000316509 XAGE1AQ9HD64 81 aa9.19□□□□□ -0.94
VAMP2-201ENST00000316509 JMJD7-PLA2G4BH0Y9G9 81 aa9.18□□□□□ -0.94
VAMP2-201ENST00000316509 GHRHP01286 108 aa9.18□□□□□ -0.94
VAMP2-201ENST00000316509 TRAV23DV6A0A075B6W5 121 aa9.17□□□□□ -0.94
VAMP2-201ENST00000316509 Q6Q795 121 aa9.17□□□□□ -0.94
VAMP2-201ENST00000316509 hADV29S1A0JD25 119 aa9.17□□□□□ -0.94
VAMP2-201ENST00000316509 DIRC1Q969H9 104 aa9.17□□□□□ -0.94
VAMP2-201ENST00000316509 PLA2G2DQ9UNK4 145 aa9.17□□□□□ -0.94
VAMP2-201ENST00000316509 TRBV10-3A0A0K0K1G6 114 aa9.16□□□□□ -0.94
VAMP2-201ENST00000316509 NHLRC4P0CG21 123 aaPredicted RBP9.16□□□□□ -0.94
VAMP2-201ENST00000316509 PKD1L1Q8TDX9 2849 aa9.15□□□□□ -0.94
VAMP2-201ENST00000316509 SLPIP03973 132 aa9.14□□□□□ -0.95
VAMP2-201ENST00000316509 Q6ZRP5 223 aa9.14□□□□□ -0.95
VAMP2-201ENST00000316509 USP17L23D6RBM5 183 aa9.14□□□□□ -0.95
VAMP2-201ENST00000316509 KRTAP21-3Q3LHN1 58 aa9.14□□□□□ -0.95
VAMP2-201ENST00000316509 SDIM1Q6ZPB5 146 aa9.14□□□□□ -0.95
VAMP2-201ENST00000316509 ZNF73O43830 326 aaPredicted RBP9.13□□□□□ -0.95
VAMP2-201ENST00000316509 COX7BP24311 80 aa9.13□□□□□ -0.95
VAMP2-201ENST00000316509 GAGE2BQ13066 116 aa9.13□□□□□ -0.95
VAMP2-201ENST00000316509 GAGE2EQ4V326 116 aa9.13□□□□□ -0.95
VAMP2-201ENST00000316509 GAGE2DQ9UEU5 116 aa9.13□□□□□ -0.95
VAMP2-201ENST00000316509 LINC00643Q86TS7 51 aa9.12□□□□□ -0.95
VAMP2-201ENST00000316509 IMUPQ9GZP8 106 aa9.12□□□□□ -0.95
VAMP2-201ENST00000316509 APLNQ9ULZ1 77 aa9.12□□□□□ -0.95
VAMP2-201ENST00000316509 ELOF1P60002 83 aaKnown RBP9.11□□□□□ -0.95
VAMP2-201ENST00000316509 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.11□□□□□ -0.95
VAMP2-201ENST00000316509 IGLV5-37A0A075B6J1 123 aa9.1□□□□□ -0.95
VAMP2-201ENST00000316509 GAGE2AQ6NT46 116 aa9.1□□□□□ -0.95
VAMP2-201ENST00000316509 C9orf129Q5T035 196 aaKnown RBP9.1□□□□□ -0.95
VAMP2-201ENST00000316509 NKAPP1Q8N9T2 125 aa9.09□□□□□ -0.95
VAMP2-201ENST00000316509 C14orf132Q9NPU4 83 aa9.09□□□□□ -0.95
VAMP2-201ENST00000316509 HUWE1Q7Z6Z7 4374 aaKnown RBP9.09□□□□□ -0.95
VAMP2-201ENST00000316509 TRBV7-7A0A0K0K1E9 115 aa9.09□□□□□ -0.95
VAMP2-201ENST00000316509 CCKP06307 115 aa9.09□□□□□ -0.95
VAMP2-201ENST00000316509 KCNQ1DNQ9H478 68 aa9.08□□□□□ -0.96
VAMP2-201ENST00000316509 MGAM2Q2M2H8 2515 aa9.08□□□□□ -0.96
VAMP2-201ENST00000316509 UBE2DNLQ8IWF7 75 aa9.07□□□□□ -0.96
VAMP2-201ENST00000316509 TENM3Q9P273 2699 aa9.07□□□□□ -0.96
VAMP2-201ENST00000316509 LOC107984640A0A0U1RRK4 108 aa9.07□□□□□ -0.96
VAMP2-201ENST00000316509 NUPR2A6NF83 97 aa9.07□□□□□ -0.96
VAMP2-201ENST00000316509 NOTCH1P46531 2555 aa9.07□□□□□ -0.96
VAMP2-201ENST00000316509 TTC32Q5I0X7 151 aa9.06□□□□□ -0.96
VAMP2-201ENST00000316509 PDE6GP18545 87 aa9.06□□□□□ -0.96
VAMP2-201ENST00000316509 CASC10Q5T4H9 136 aa9.06□□□□□ -0.96
VAMP2-201ENST00000316509 C14orf177Q52M58 125 aa9.05□□□□□ -0.96
VAMP2-201ENST00000316509 RBM3P98179 157 aaKnown RBP9.05□□□□□ -0.96
VAMP2-201ENST00000316509 Q6ZQY7 126 aa9.05□□□□□ -0.96
VAMP2-201ENST00000316509 LINC00528Q8N1L1 170 aa9.05□□□□□ -0.96
VAMP2-201ENST00000316509 ANAPC13Q9BS18 74 aa9.05□□□□□ -0.96
VAMP2-201ENST00000316509 LOC110117498A0A087WWA1 95 aa9.03□□□□□ -0.96
VAMP2-201ENST00000316509 C7orf33Q8WU49 177 aa9.03□□□□□ -0.96
VAMP2-201ENST00000316509 PRYO14603 147 aa9.03□□□□□ -0.96
VAMP2-201ENST00000316509 CNBPP62633 177 aaKnown RBP9.03□□□□□ -0.96
VAMP2-201ENST00000316509 SMCR5Q8TEV8 140 aa9.03□□□□□ -0.96
VAMP2-201ENST00000316509 SS18L2Q9UHA2 77 aa9.03□□□□□ -0.96
VAMP2-201ENST00000316509 SERTAD4-AS1Q5TG53 156 aa9.02□□□□□ -0.97
VAMP2-201ENST00000316509 LAMTOR3Q9UHA4 124 aa9.02□□□□□ -0.97
VAMP2-201ENST00000316509 NBEAL1Q6ZS30 2694 aa9.02□□□□□ -0.97
VAMP2-201ENST00000316509 PSCAO43653 123 aa9.01□□□□□ -0.97
VAMP2-201ENST00000316509 PKIGQ9Y2B9 76 aa9.01□□□□□ -0.97
VAMP2-201ENST00000316509 IGLV1-50A0A075B6I6 118 aa9□□□□□ -0.97
VAMP2-201ENST00000316509 Q6JHZ5 121 aa8.99□□□□□ -0.97
VAMP2-201ENST00000316509 DSCR8Q96T75 97 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms