RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 LINC01546A6NGU7 62 aa10.97□□□□□ -0.65
HCFC1-201ENST00000310441 LYPD5Q6UWN5 251 aa10.95□□□□□ -0.66
HCFC1-201ENST00000310441 ATP11AUNQ6ZP68 121 aa10.94□□□□□ -0.66
HCFC1-201ENST00000310441 SMIM29Q86T20 159 aa10.93□□□□□ -0.66
HCFC1-201ENST00000310441 LOC110117498A0A087WWA1 95 aa10.93□□□□□ -0.66
HCFC1-201ENST00000310441 PRM2P04554 102 aa10.93□□□□□ -0.66
HCFC1-201ENST00000310441 C11orf72Q8NBR9 251 aa10.93□□□□□ -0.66
HCFC1-201ENST00000310441 CR1P17927 2039 aa10.92□□□□□ -0.66
HCFC1-201ENST00000310441 OXLD1Q5BKU9 147 aa10.91□□□□□ -0.66
HCFC1-201ENST00000310441 LINC00310P59036 64 aa10.91□□□□□ -0.66
HCFC1-201ENST00000310441 IGLV5-39A0A0G2JS06 123 aa10.91□□□□□ -0.66
HCFC1-201ENST00000310441 DEFB116Q30KQ4 102 aa10.9□□□□□ -0.66
HCFC1-201ENST00000310441 PLA2G1BP04054 148 aaKnown RBP10.89□□□□□ -0.67
HCFC1-201ENST00000310441 LINC00313P59037 77 aa10.89□□□□□ -0.67
HCFC1-201ENST00000310441 MOBPQ13875 183 aa10.88□□□□□ -0.67
HCFC1-201ENST00000310441 C22orf24Q9Y442 160 aa10.88□□□□□ -0.67
HCFC1-201ENST00000310441 URB1-AS1Q96HZ7 61 aa10.88□□□□□ -0.67
HCFC1-201ENST00000310441 SPATA3Q8NHX4 192 aa10.88□□□□□ -0.67
HCFC1-201ENST00000310441 SMCR5Q8TEV8 140 aa10.87□□□□□ -0.67
HCFC1-201ENST00000310441 C4orf26Q17RF5 130 aa10.87□□□□□ -0.67
HCFC1-201ENST00000310441 CDIP1Q9H305 208 aa10.87□□□□□ -0.67
HCFC1-201ENST00000310441 KIAA0087Q14695 138 aa10.87□□□□□ -0.67
HCFC1-201ENST00000310441 WISP2O76076 250 aa10.86□□□□□ -0.67
HCFC1-201ENST00000310441 CYP4F30PQ9H0H9 118 aa10.86□□□□□ -0.67
HCFC1-201ENST00000310441 LOC101927531A0A1B0GV80 90 aa10.86□□□□□ -0.67
HCFC1-201ENST00000310441 ERC2-IT1O76042 136 aa10.86□□□□□ -0.67
HCFC1-201ENST00000310441 Q6ZRU5 148 aa10.86□□□□□ -0.67
HCFC1-201ENST00000310441 H3BNG1 76 aa10.86□□□□□ -0.67
HCFC1-201ENST00000310441 EDN2P20800 178 aa10.85□□□□□ -0.67
HCFC1-201ENST00000310441 Q8NBF4 154 aa10.85□□□□□ -0.67
HCFC1-201ENST00000310441 ELOF1P60002 83 aaKnown RBP10.84□□□□□ -0.67
HCFC1-201ENST00000310441 KIF25-AS1Q9Y6Z4 181 aa10.84□□□□□ -0.67
HCFC1-201ENST00000310441 A8MTW9 85 aa10.83□□□□□ -0.68
HCFC1-201ENST00000310441 Q6ZRX8 168 aa10.81□□□□□ -0.68
HCFC1-201ENST00000310441 SPACA4Q8TDM5 124 aa10.81□□□□□ -0.68
HCFC1-201ENST00000310441 IGLV5-45A0A087WSX0 123 aa10.81□□□□□ -0.68
HCFC1-201ENST00000310441 A0A096LNJ9 63 aa10.8□□□□□ -0.68
HCFC1-201ENST00000310441 Q6ZQT0 140 aa10.8□□□□□ -0.68
HCFC1-201ENST00000310441 IGHV3OR16-9A0A0B4J2B5 98 aa10.8□□□□□ -0.68
HCFC1-201ENST00000310441 FHL3Q13643 280 aa10.79□□□□□ -0.68
HCFC1-201ENST00000310441 Q9UF83 564 aa10.78□□□□□ -0.68
HCFC1-201ENST00000310441 FAM229AH3BQW9 127 aa10.78□□□□□ -0.68
HCFC1-201ENST00000310441 CRIPTQ9P021 101 aa10.77□□□□□ -0.68
HCFC1-201ENST00000310441 TRBV7-4A0A0J9YYF1 115 aa10.77□□□□□ -0.68
HCFC1-201ENST00000310441 Q6ZSN1 163 aa10.77□□□□□ -0.69
HCFC1-201ENST00000310441 UQCR11O14957 56 aa10.76□□□□□ -0.69
HCFC1-201ENST00000310441 CD164Q04900 197 aa10.76□□□□□ -0.69
HCFC1-201ENST00000310441 Q6ZRP5 223 aa10.76□□□□□ -0.69
HCFC1-201ENST00000310441 C16orf90A8MZG2 172 aa10.75□□□□□ -0.69
HCFC1-201ENST00000310441 LINC00167Q96N53 147 aa10.74□□□□□ -0.69
HCFC1-201ENST00000310441 SSBP3-AS1Q7Z2R9 100 aa10.74□□□□□ -0.69
HCFC1-201ENST00000310441 LINC00476Q8WZB0 136 aa10.73□□□□□ -0.69
HCFC1-201ENST00000310441 A8MWP4 228 aa10.73□□□□□ -0.69
HCFC1-201ENST00000310441 TYMSOSQ8TAI1 123 aa10.72□□□□□ -0.69
HCFC1-201ENST00000310441 MDFIQ99750 246 aa10.71□□□□□ -0.69
HCFC1-201ENST00000310441 AVPP01185 164 aa10.71□□□□□ -0.69
HCFC1-201ENST00000310441 LINC01600Q96MT4 127 aa10.69□□□□□ -0.7
HCFC1-201ENST00000310441 GVQW2A0A096LPI5 108 aaPredicted RBP10.67□□□□□ -0.7
HCFC1-201ENST00000310441 FAM19A4Q96LR4 140 aa10.67□□□□□ -0.7
HCFC1-201ENST00000310441 EPM2AB3EWF7 344 aa10.67□□□□□ -0.7
HCFC1-201ENST00000310441 COL4A2P08572 1712 aa10.65□□□□□ -0.7
HCFC1-201ENST00000310441 EPG5Q9HCE0 2579 aa10.65□□□□□ -0.7
HCFC1-201ENST00000310441 IGLV8-61A0A075B6I0 122 aa10.65□□□□□ -0.71
HCFC1-201ENST00000310441 TM2D3Q9BRN9 247 aa10.65□□□□□ -0.71
HCFC1-201ENST00000310441 COA5Q86WW8 74 aa10.63□□□□□ -0.71
HCFC1-201ENST00000310441 KTN1-AS1Q86SY8 53 aa10.62□□□□□ -0.71
HCFC1-201ENST00000310441 Q96NJ1 140 aa10.62□□□□□ -0.71
HCFC1-201ENST00000310441 CENPFP49454 3210 aa10.62□□□□□ -0.71
HCFC1-201ENST00000310441 IGLV6-57P01721 117 aa10.62□□□□□ -0.71
HCFC1-201ENST00000310441 PRO0461Q9UI25 63 aa10.61□□□□□ -0.71
HCFC1-201ENST00000310441 SMR3AQ99954 134 aa10.6□□□□□ -0.71
HCFC1-201ENST00000310441 MIR22HGQ0VDD5 57 aa10.59□□□□□ -0.71
HCFC1-201ENST00000310441 FAM218AQ96MZ4 157 aa10.59□□□□□ -0.71
HCFC1-201ENST00000310441 MRPL34Q9BQ48 92 aaKnown RBP10.59□□□□□ -0.71
HCFC1-201ENST00000310441 RTL8CO15255 209 aa10.59□□□□□ -0.71
HCFC1-201ENST00000310441 HECTD1Q9ULT8 2610 aa10.58□□□□□ -0.72
HCFC1-201ENST00000310441 AKAP13Q12802 2813 aa10.57□□□□□ -0.72
HCFC1-201ENST00000310441 ST20-AS1Q8NBB2 130 aa10.56□□□□□ -0.72
HCFC1-201ENST00000310441 SMCPP49901 116 aaPredicted RBP10.56□□□□□ -0.72
HCFC1-201ENST00000310441 RPL37AP61513 92 aaKnown RBP10.56□□□□□ -0.72
HCFC1-201ENST00000310441 KLKP1Q107X0 134 aa10.55□□□□□ -0.72
HCFC1-201ENST00000310441 CDSNQ15517 529 aa10.55□□□□□ -0.72
HCFC1-201ENST00000310441 LUZP6Q538Z0 58 aa10.55□□□□□ -0.72
HCFC1-201ENST00000310441 NBDYA0A0U1RRE5 68 aa10.54□□□□□ -0.72
HCFC1-201ENST00000310441 DNAH10OSP0CZ25 163 aa10.54□□□□□ -0.72
HCFC1-201ENST00000310441 LCA10Q71F78 164 aa10.53□□□□□ -0.72
HCFC1-201ENST00000310441 LINC00315P59091 139 aa10.52□□□□□ -0.72
HCFC1-201ENST00000310441 MAST4O15021 2626 aa10.52□□□□□ -0.73
HCFC1-201ENST00000310441 PHF5AQ7RTV0 110 aaKnown RBP10.51□□□□□ -0.73
HCFC1-201ENST00000310441 APLNQ9ULZ1 77 aa10.5□□□□□ -0.73
HCFC1-201ENST00000310441 MGAM2Q2M2H8 2515 aa10.49□□□□□ -0.73
HCFC1-201ENST00000310441 K7EQZ3 153 aa10.49□□□□□ -0.73
HCFC1-201ENST00000310441 CDC42SE1Q9NRR8 79 aa10.49□□□□□ -0.73
HCFC1-201ENST00000310441 CHTF8P0CG12 524 aa10.48□□□□□ -0.73
HCFC1-201ENST00000310441 PRO3102Q9H379 93 aa10.48□□□□□ -0.73
HCFC1-201ENST00000310441 PRR15Q8IV56 129 aa10.47□□□□□ -0.73
HCFC1-201ENST00000310441 ATRQ13535 2644 aa10.47□□□□□ -0.73
HCFC1-201ENST00000310441 LINC01554Q52M75 96 aa10.47□□□□□ -0.73
HCFC1-201ENST00000310441 KCNQ1DNQ9H478 68 aa10.47□□□□□ -0.73
HCFC1-201ENST00000310441 COX6B2Q6YFQ2 88 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms