RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 TMEM256-PLSCR3K7ERE1 68 aa4.78□□□□□ -1.64
RGPD3-201ENST00000304514 KRTAP24-1Q3LI83 254 aa4.78□□□□□ -1.64
RGPD3-201ENST00000304514 ESRGQ1W209 222 aa4.78□□□□□ -1.64
RGPD3-201ENST00000304514 C6orf99Q4VX62 202 aa4.78□□□□□ -1.64
RGPD3-201ENST00000304514 FAM236AA0A1B0GUQ0 79 aa4.78□□□□□ -1.64
RGPD3-201ENST00000304514 FAM236BA0A1B0GV22 79 aa4.78□□□□□ -1.64
RGPD3-201ENST00000304514 LOC110117498A0A087WWA1 95 aa4.77□□□□□ -1.65
RGPD3-201ENST00000304514 TRBV7-6A0A0J9YX20 115 aa4.77□□□□□ -1.65
RGPD3-201ENST00000304514 hADV29S1A0JD25 119 aa4.77□□□□□ -1.65
RGPD3-201ENST00000304514 VPREB1P12018 145 aa4.77□□□□□ -1.65
RGPD3-201ENST00000304514 JMJD7-PLA2G4BH0Y9G9 81 aa4.76□□□□□ -1.65
RGPD3-201ENST00000304514 ELOF1P60002 83 aaKnown RBP4.76□□□□□ -1.65
RGPD3-201ENST00000304514 Q6ZQT0 140 aa4.76□□□□□ -1.65
RGPD3-201ENST00000304514 C2orf48Q96LS8 159 aa4.76□□□□□ -1.65
RGPD3-201ENST00000304514 FAM208BQ5VWN6 2430 aa4.76□□□□□ -1.65
RGPD3-201ENST00000304514 HIVEP1P15822 2718 aa4.76□□□□□ -1.65
RGPD3-201ENST00000304514 TRAV23DV6A0A075B6W5 121 aa4.76□□□□□ -1.65
RGPD3-201ENST00000304514 TRBV10-3A0A0K0K1G6 114 aa4.76□□□□□ -1.65
RGPD3-201ENST00000304514 LINC01556Q5JQF7 62 aa4.76□□□□□ -1.65
RGPD3-201ENST00000304514 S100A7L2Q5SY68 101 aa4.76□□□□□ -1.65
RGPD3-201ENST00000304514 F8WDY8 70 aa4.76□□□□□ -1.65
RGPD3-201ENST00000304514 ZNF561-AS1K7EIQ3 104 aa4.76□□□□□ -1.65
RGPD3-201ENST00000304514 RPL18AQ02543 176 aaKnown RBP4.75□□□□□ -1.65
RGPD3-201ENST00000304514 Q6ZRU5 148 aa4.75□□□□□ -1.65
RGPD3-201ENST00000304514 SS18L2Q9UHA2 77 aa4.75□□□□□ -1.65
RGPD3-201ENST00000304514 HIGD2BQ4VC39 106 aa4.75□□□□□ -1.65
RGPD3-201ENST00000304514 B5MCH6 92 aa4.74□□□□□ -1.65
RGPD3-201ENST00000304514 HECTD4Q9Y4D8 3996 aa4.74□□□□□ -1.65
RGPD3-201ENST00000304514 DNAH6Q9C0G6 4158 aa4.74□□□□□ -1.65
RGPD3-201ENST00000304514 NSD1Q96L73 2696 aaPredicted RBP4.74□□□□□ -1.65
RGPD3-201ENST00000304514 CREBBPQ92793 2442 aa4.74□□□□□ -1.65
RGPD3-201ENST00000304514 DNAH10OSP0CZ25 163 aa4.74□□□□□ -1.65
RGPD3-201ENST00000304514 Q6ZRP5 223 aa4.74□□□□□ -1.65
RGPD3-201ENST00000304514 C3orf22Q8N5N4 141 aa4.74□□□□□ -1.65
RGPD3-201ENST00000304514 FBN1P35555 2871 aaKnown RBP4.73□□□□□ -1.65
RGPD3-201ENST00000304514 ZNF73O43830 326 aaPredicted RBP4.73□□□□□ -1.65
RGPD3-201ENST00000304514 WNK1Q9H4A3 2382 aa4.73□□□□□ -1.65
RGPD3-201ENST00000304514 H3BQ85 93 aa4.73□□□□□ -1.65
RGPD3-201ENST00000304514 NDUFC2-KCTD14E9PQ53 114 aa4.73□□□□□ -1.65
RGPD3-201ENST00000304514 M0R2N4 97 aa4.73□□□□□ -1.65
RGPD3-201ENST00000304514 CAMK2N2Q96S95 79 aa4.73□□□□□ -1.65
RGPD3-201ENST00000304514 XAGE1AQ9HD64 81 aa4.73□□□□□ -1.65
RGPD3-201ENST00000304514 M0R378 163 aa4.72□□□□□ -1.65
RGPD3-201ENST00000304514 DIRC1Q969H9 104 aa4.72□□□□□ -1.65
RGPD3-201ENST00000304514 C11orf45Q8TAV5 145 aa4.72□□□□□ -1.65
RGPD3-201ENST00000304514 FRAS1Q86XX4 4008 aa4.72□□□□□ -1.65
RGPD3-201ENST00000304514 DEFB131BA0A096LNP1 70 aa4.72□□□□□ -1.65
RGPD3-201ENST00000304514 IGKV3D-7A0A0C4DH55 119 aa4.72□□□□□ -1.65
RGPD3-201ENST00000304514 ATP5EP2Q5VTU8 51 aa4.72□□□□□ -1.65
RGPD3-201ENST00000304514 TLX1NBP0CAT3 122 aa4.71□□□□□ -1.65
RGPD3-201ENST00000304514 PLA2G2DQ9UNK4 145 aa4.71□□□□□ -1.66
RGPD3-201ENST00000304514 COX7BP24311 80 aa4.71□□□□□ -1.66
RGPD3-201ENST00000304514 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.71□□□□□ -1.66
RGPD3-201ENST00000304514 LINC00528Q8N1L1 170 aa4.71□□□□□ -1.66
RGPD3-201ENST00000304514 TM2D3Q9BRN9 247 aa4.71□□□□□ -1.66
RGPD3-201ENST00000304514 PLECQ15149 4684 aaKnown RBP4.71□□□□□ -1.66
RGPD3-201ENST00000304514 UPK3BQ9BT76 320 aa4.71□□□□□ -1.66
RGPD3-201ENST00000304514 TLN2Q9Y4G6 2542 aa4.71□□□□□ -1.66
RGPD3-201ENST00000304514 NOTCH3Q9UM47 2321 aa4.71□□□□□ -1.66
RGPD3-201ENST00000304514 A0A087WVE0 104 aa4.7□□□□□ -1.66
RGPD3-201ENST00000304514 TRBV7-4A0A0J9YYF1 115 aa4.7□□□□□ -1.66
RGPD3-201ENST00000304514 UQCRQO14949 82 aa4.7□□□□□ -1.66
RGPD3-201ENST00000304514 RBM3P98179 157 aaKnown RBP4.7□□□□□ -1.66
RGPD3-201ENST00000304514 SERTAD4-AS1Q5TG53 156 aa4.7□□□□□ -1.66
RGPD3-201ENST00000304514 LINC00588Q9Y4M8 146 aa4.7□□□□□ -1.66
RGPD3-201ENST00000304514 KRTAP7-1Q8IUC3 87 aa4.7□□□□□ -1.66
RGPD3-201ENST00000304514 VPS13DQ5THJ4 4388 aa4.7□□□□□ -1.66
RGPD3-201ENST00000304514 IGLV5-37A0A075B6J1 123 aa4.7□□□□□ -1.66
RGPD3-201ENST00000304514 ATOX1O00244 68 aa4.7□□□□□ -1.66
RGPD3-201ENST00000304514 COX7CP15954 63 aa4.7□□□□□ -1.66
RGPD3-201ENST00000304514 Q6ZQY7 126 aa4.7□□□□□ -1.66
RGPD3-201ENST00000304514 DNAH2Q9P225 4427 aa4.69□□□□□ -1.66
RGPD3-201ENST00000304514 KCNQ1DNQ9H478 68 aa4.69□□□□□ -1.66
RGPD3-201ENST00000304514 SONP18583 2426 aaKnown RBP4.69□□□□□ -1.66
RGPD3-201ENST00000304514 CRYGAP11844 174 aa4.69□□□□□ -1.66
RGPD3-201ENST00000304514 CASC10Q5T4H9 136 aa4.68□□□□□ -1.66
RGPD3-201ENST00000304514 C3orf56Q8N813 242 aa4.68□□□□□ -1.66
RGPD3-201ENST00000304514 C1orf43Q9BWL3 253 aa4.68□□□□□ -1.66
RGPD3-201ENST00000304514 CYSTM1Q9H1C7 97 aa4.68□□□□□ -1.66
RGPD3-201ENST00000304514 NBEAL2Q6ZNJ1 2754 aa4.68□□□□□ -1.66
RGPD3-201ENST00000304514 FASNP49327 2511 aaKnown RBP4.68□□□□□ -1.66
RGPD3-201ENST00000304514 ALMS1Q8TCU4 4167 aa4.68□□□□□ -1.66
RGPD3-201ENST00000304514 IGKV2D-24A0A075B6R9 120 aa4.68□□□□□ -1.66
RGPD3-201ENST00000304514 KRTAP4-16G5E9R7 235 aaPredicted RBP4.68□□□□□ -1.66
RGPD3-201ENST00000304514 LINC01547P58512 204 aaPredicted RBP4.68□□□□□ -1.66
RGPD3-201ENST00000304514 MYO9AB2RTY4 2548 aa4.68□□□□□ -1.66
RGPD3-201ENST00000304514 FN1P02751 2386 aaKnown RBP4.67□□□□□ -1.66
RGPD3-201ENST00000304514 TRAV10A0A0B4J240 114 aa4.67□□□□□ -1.66
RGPD3-201ENST00000304514 SYCNQ0VAF6 134 aa4.67□□□□□ -1.66
RGPD3-201ENST00000304514 TEP1Q99973 2627 aaKnown RBP4.67□□□□□ -1.66
RGPD3-201ENST00000304514 LAMTOR3Q9UHA4 124 aa4.66□□□□□ -1.66
RGPD3-201ENST00000304514 FAM168BA1KXE4 195 aa4.66□□□□□ -1.66
RGPD3-201ENST00000304514 K7EIL1 84 aa4.66□□□□□ -1.66
RGPD3-201ENST00000304514 C7orf33Q8WU49 177 aa4.66□□□□□ -1.66
RGPD3-201ENST00000304514 DSCR8Q96T75 97 aa4.66□□□□□ -1.66
RGPD3-201ENST00000304514 ACANP16112 2415 aa4.66□□□□□ -1.66
RGPD3-201ENST00000304514 STARD9Q9P2P6 4700 aa4.66□□□□□ -1.66
RGPD3-201ENST00000304514 PDE6GP18545 87 aa4.66□□□□□ -1.66
RGPD3-201ENST00000304514 Q6ZVQ6 151 aa4.66□□□□□ -1.66
RGPD3-201ENST00000304514 MRAPQ8TCY5 172 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms