RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 LOC107984156A0A0G2JMH3 177 aa5.99□□□□□ -1.45
RFX3-201ENST00000302303 FAM168BA1KXE4 195 aa5.99□□□□□ -1.45
RFX3-201ENST00000302303 TIMM17BO60830 172 aa5.99□□□□□ -1.45
RFX3-201ENST00000302303 LINC00158P58513 81 aa5.99□□□□□ -1.45
RFX3-201ENST00000302303 RPL18AQ02543 176 aaKnown RBP5.99□□□□□ -1.45
RFX3-201ENST00000302303 GAGE2EQ4V326 116 aa5.99□□□□□ -1.45
RFX3-201ENST00000302303 C2orf91Q6ZV80 131 aa5.99□□□□□ -1.45
RFX3-201ENST00000302303 ARL17AQ8IVW1 177 aa5.99□□□□□ -1.45
RFX3-201ENST00000302303 MIR7-3HGQ8N6C7 128 aa5.99□□□□□ -1.45
RFX3-201ENST00000302303 GAGE2DQ9UEU5 116 aa5.99□□□□□ -1.45
RFX3-201ENST00000302303 MEIG1Q5JSS6 88 aa5.99□□□□□ -1.45
RFX3-201ENST00000302303 LINC00518Q8N0U6 118 aa5.99□□□□□ -1.45
RFX3-201ENST00000302303 KRTAP17-1Q9BYP8 105 aa5.99□□□□□ -1.45
RFX3-201ENST00000302303 A0A087WYN8 130 aa5.98□□□□□ -1.45
RFX3-201ENST00000302303 HAMPP81172 84 aa5.98□□□□□ -1.45
RFX3-201ENST00000302303 SERTAD4-AS1Q5TG53 156 aa5.98□□□□□ -1.45
RFX3-201ENST00000302303 CIRBP-AS1Q8TBR5 109 aa5.98□□□□□ -1.45
RFX3-201ENST00000302303 C12orf57Q99622 126 aa5.98□□□□□ -1.45
RFX3-201ENST00000302303 LINC00587B1AMM8 73 aa5.97□□□□□ -1.45
RFX3-201ENST00000302303 FAT1Q14517 4588 aa5.97□□□□□ -1.45
RFX3-201ENST00000302303 KIAA1109Q2LD37 5005 aa5.97□□□□□ -1.45
RFX3-201ENST00000302303 SLC25A34Q6PIV7 304 aa5.97□□□□□ -1.45
RFX3-201ENST00000302303 SCXQ7RTU7 201 aa5.97□□□□□ -1.45
RFX3-201ENST00000302303 SPANXDQ9BXN6 97 aa5.97□□□□□ -1.45
RFX3-201ENST00000302303 SPANXCQ9NY87 97 aa5.97□□□□□ -1.45
RFX3-201ENST00000302303 PLAC8Q9NZF1 115 aa5.97□□□□□ -1.45
RFX3-201ENST00000302303 VPREB1P12018 145 aa5.96□□□□□ -1.46
RFX3-201ENST00000302303 S100A12P80511 92 aa5.96□□□□□ -1.46
RFX3-201ENST00000302303 SCGB1D4Q6XE38 83 aa5.96□□□□□ -1.46
RFX3-201ENST00000302303 SPANXB1Q9NS25 103 aaPredicted RBP5.96□□□□□ -1.46
RFX3-201ENST00000302303 PLA2G2DQ9UNK4 145 aa5.96□□□□□ -1.46
RFX3-201ENST00000302303 PRR3P79522 188 aaKnown RBP5.95□□□□□ -1.46
RFX3-201ENST00000302303 LINC00308Q8TCZ7 52 aa5.95□□□□□ -1.46
RFX3-201ENST00000302303 PRO1933Q9H354 126 aa5.95□□□□□ -1.46
RFX3-201ENST00000302303 HIGD1BQ9P298 99 aa5.95□□□□□ -1.46
RFX3-201ENST00000302303 LINC00474Q9P2X8 69 aa5.95□□□□□ -1.46
RFX3-201ENST00000302303 RYR1P21817 5038 aa5.95□□□□□ -1.46
RFX3-201ENST00000302303 BIRC6Q9NR09 4857 aa5.95□□□□□ -1.46
RFX3-201ENST00000302303 IGLV5-37A0A075B6J1 123 aa5.94□□□□□ -1.46
RFX3-201ENST00000302303 NPC2P61916 151 aa5.94□□□□□ -1.46
RFX3-201ENST00000302303 KRTAP11-1Q8IUC1 163 aa5.94□□□□□ -1.46
RFX3-201ENST00000302303 PKIGQ9Y2B9 76 aa5.94□□□□□ -1.46
RFX3-201ENST00000302303 MUSTN1Q8IVN3 82 aa5.94□□□□□ -1.46
RFX3-201ENST00000302303 PPDPFQ9H3Y8 114 aa5.94□□□□□ -1.46
RFX3-201ENST00000302303 TMEM238C9JI98 176 aa5.93□□□□□ -1.46
RFX3-201ENST00000302303 CDK2AP2O75956 126 aa5.93□□□□□ -1.46
RFX3-201ENST00000302303 Q6ZVH6 145 aa5.93□□□□□ -1.46
RFX3-201ENST00000302303 UQCR10Q9UDW1 63 aa5.93□□□□□ -1.46
RFX3-201ENST00000302303 C22orf24Q9Y442 160 aa5.93□□□□□ -1.46
RFX3-201ENST00000302303 IGKV2-28A0A075B6P5 120 aa5.92□□□□□ -1.46
RFX3-201ENST00000302303 IGKV2D-28P01615 120 aa5.92□□□□□ -1.46
RFX3-201ENST00000302303 PHF5AQ7RTV0 110 aaKnown RBP5.92□□□□□ -1.46
RFX3-201ENST00000302303 FAM19A5Q7Z5A7 132 aaPredicted RBP5.92□□□□□ -1.46
RFX3-201ENST00000302303 MIEN1Q9BRT3 115 aa5.92□□□□□ -1.46
RFX3-201ENST00000302303 VPS13BQ7Z7G8 4022 aa5.91□□□□□ -1.46
RFX3-201ENST00000302303 NDUFC2O95298 119 aa5.91□□□□□ -1.46
RFX3-201ENST00000302303 IFITM1P13164 125 aa5.91□□□□□ -1.46
RFX3-201ENST00000302303 DPH3Q96FX2 82 aa5.91□□□□□ -1.46
RFX3-201ENST00000302303 LCE2AQ5TA79 106 aaPredicted RBP5.9□□□□□ -1.46
RFX3-201ENST00000302303 C7orf33Q8WU49 177 aa5.9□□□□□ -1.46
RFX3-201ENST00000302303 LINC00167Q96N53 147 aa5.9□□□□□ -1.46
RFX3-201ENST00000302303 M0QXV9 152 aa5.89□□□□□ -1.47
RFX3-201ENST00000302303 SRSF9Q13242 221 aaKnown RBP eCLIP5.89□□□□□ -1.47
RFX3-201ENST00000302303 A4D1N5 150 aa5.89□□□□□ -1.47
RFX3-201ENST00000302303 SMR3BP02814 79 aaPredicted RBP5.89□□□□□ -1.47
RFX3-201ENST00000302303 KRTAP10-4P60372 401 aaPredicted RBP5.89□□□□□ -1.47
RFX3-201ENST00000302303 MRPL55Q7Z7F7 128 aaKnown RBP5.89□□□□□ -1.47
RFX3-201ENST00000302303 HIST1H4GQ99525 98 aa5.89□□□□□ -1.47
RFX3-201ENST00000302303 NCR3O14931 201 aa5.88□□□□□ -1.47
RFX3-201ENST00000302303 FXYD2P54710 66 aa5.88□□□□□ -1.47
RFX3-201ENST00000302303 RPL24P83731 157 aaKnown RBP5.88□□□□□ -1.47
RFX3-201ENST00000302303 TAL2Q16559 108 aa5.88□□□□□ -1.47
RFX3-201ENST00000302303 CEND1Q8N111 149 aa5.88□□□□□ -1.47
RFX3-201ENST00000302303 LINC00337Q8N6G1 96 aa5.88□□□□□ -1.47
RFX3-201ENST00000302303 IGLV1-50A0A075B6I6 118 aa5.87□□□□□ -1.47
RFX3-201ENST00000302303 TRBV10-2A0A0K0K1G8 114 aa5.87□□□□□ -1.47
RFX3-201ENST00000302303 GAGE10A6NGK3 116 aa5.87□□□□□ -1.47
RFX3-201ENST00000302303 M0R378 163 aa5.87□□□□□ -1.47
RFX3-201ENST00000302303 RPL37AP8A6NKH3 93 aa5.86□□□□□ -1.47
RFX3-201ENST00000302303 IGLV6-57P01721 117 aa5.86□□□□□ -1.47
RFX3-201ENST00000302303 HNRNPA3P51991 378 aaKnown RBP5.86□□□□□ -1.47
RFX3-201ENST00000302303 HSD52Q0P140 79 aa5.86□□□□□ -1.47
RFX3-201ENST00000302303 HERC2O95714 4834 aa5.86□□□□□ -1.47
RFX3-201ENST00000302303 TRBV10-3A0A0K0K1G6 114 aa5.85□□□□□ -1.47
RFX3-201ENST00000302303 TSTD3H0UI37 97 aa5.85□□□□□ -1.47
RFX3-201ENST00000302303 H3BS24 57 aa5.85□□□□□ -1.47
RFX3-201ENST00000302303 CFC1BP0CG36 223 aa5.85□□□□□ -1.47
RFX3-201ENST00000302303 CFC1P0CG37 223 aa5.85□□□□□ -1.47
RFX3-201ENST00000302303 CTAG1AP78358 180 aa5.85□□□□□ -1.47
RFX3-201ENST00000302303 NKAPP1Q8N9T2 125 aa5.85□□□□□ -1.47
RFX3-201ENST00000302303 LORP23490 312 aaPredicted RBP5.84□□□□□ -1.47
RFX3-201ENST00000302303 LBHQ53QV2 105 aaPredicted RBP5.84□□□□□ -1.47
RFX3-201ENST00000302303 PSORS1C2Q9UIG4 136 aa5.84□□□□□ -1.47
RFX3-201ENST00000302303 KRTAP4-16G5E9R7 235 aaPredicted RBP5.84□□□□□ -1.48
RFX3-201ENST00000302303 DDTP30046 118 aa5.84□□□□□ -1.48
RFX3-201ENST00000302303 BVES-AS1Q5T3Y7 98 aa5.84□□□□□ -1.48
RFX3-201ENST00000302303 COPS9Q8WXC6 57 aa5.84□□□□□ -1.48
RFX3-201ENST00000302303 KCNQ1DNQ9H478 68 aa5.84□□□□□ -1.48
RFX3-201ENST00000302303 A0A1B0GWB2 263 aa5.83□□□□□ -1.48
RFX3-201ENST00000302303 SPRR1AP35321 89 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms