RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 A0A087WYN8 130 aa10.38□□□□□ -0.75
NPM1-201ENST00000296930 CHTF8P0CG12 524 aa10.38□□□□□ -0.75
NPM1-201ENST00000296930 C10orf25Q5T742 122 aa10.38□□□□□ -0.75
NPM1-201ENST00000296930 LITAFQ99732 161 aa10.38□□□□□ -0.75
NPM1-201ENST00000296930 SERTAD4-AS1Q5TG53 156 aa10.37□□□□□ -0.75
NPM1-201ENST00000296930 UNQ6190/PRO20217Q6UXQ8 127 aa10.37□□□□□ -0.75
NPM1-201ENST00000296930 C2orf48Q96LS8 159 aa10.37□□□□□ -0.75
NPM1-201ENST00000296930 FAT3Q8TDW7 4589 aa10.37□□□□□ -0.75
NPM1-201ENST00000296930 PKHD1L1Q86WI1 4243 aa10.37□□□□□ -0.75
NPM1-201ENST00000296930 CTAG1AP78358 180 aa10.37□□□□□ -0.75
NPM1-201ENST00000296930 CAMK2N2Q96S95 79 aa10.36□□□□□ -0.75
NPM1-201ENST00000296930 TIMM17BO60830 172 aa10.35□□□□□ -0.75
NPM1-201ENST00000296930 MEIG1Q5JSS6 88 aa10.35□□□□□ -0.75
NPM1-201ENST00000296930 ADAMTSL4-AS1Q5T5F5 129 aa10.35□□□□□ -0.75
NPM1-201ENST00000296930 SPANXB1Q9NS25 103 aaPredicted RBP10.35□□□□□ -0.75
NPM1-201ENST00000296930 PLAC8Q9NZF1 115 aa10.35□□□□□ -0.75
NPM1-201ENST00000296930 TMEM238C9JI98 176 aa10.34□□□□□ -0.75
NPM1-201ENST00000296930 Q6ZRU5 148 aa10.34□□□□□ -0.75
NPM1-201ENST00000296930 LINC00587B1AMM8 73 aa10.34□□□□□ -0.75
NPM1-201ENST00000296930 F8WDY8 70 aa10.34□□□□□ -0.75
NPM1-201ENST00000296930 SMIM13P0DJ93 91 aa10.34□□□□□ -0.75
NPM1-201ENST00000296930 C9orf116Q5BN46 136 aaPredicted RBP10.34□□□□□ -0.75
NPM1-201ENST00000296930 C6orf48Q9UBA6 75 aa10.34□□□□□ -0.75
NPM1-201ENST00000296930 ERG28Q9UKR5 140 aa10.34□□□□□ -0.75
NPM1-201ENST00000296930 A0A0U1RRA0 63 aa10.33□□□□□ -0.76
NPM1-201ENST00000296930 HSD52Q0P140 79 aa10.32□□□□□ -0.76
NPM1-201ENST00000296930 SYCNQ0VAF6 134 aa10.32□□□□□ -0.76
NPM1-201ENST00000296930 TRBV30A0A0K0K1B3 111 aa10.31□□□□□ -0.76
NPM1-201ENST00000296930 PFN2P35080 140 aa10.31□□□□□ -0.76
NPM1-201ENST00000296930 DAND5Q8N907 189 aa10.31□□□□□ -0.76
NPM1-201ENST00000296930 C7orf33Q8WU49 177 aa10.31□□□□□ -0.76
NPM1-201ENST00000296930 HIST1H4GQ99525 98 aa10.31□□□□□ -0.76
NPM1-201ENST00000296930 SPANXDQ9BXN6 97 aa10.31□□□□□ -0.76
NPM1-201ENST00000296930 SPANXCQ9NY87 97 aa10.31□□□□□ -0.76
NPM1-201ENST00000296930 PKIGQ9Y2B9 76 aa10.31□□□□□ -0.76
NPM1-201ENST00000296930 IGKV2-24A0A0C4DH68 120 aa10.31□□□□□ -0.76
NPM1-201ENST00000296930 SRSF9Q13242 221 aaKnown RBP eCLIP10.31□□□□□ -0.76
NPM1-201ENST00000296930 TAL2Q16559 108 aa10.31□□□□□ -0.76
NPM1-201ENST00000296930 SMCPP49901 116 aaPredicted RBP10.3□□□□□ -0.76
NPM1-201ENST00000296930 LINC00158P58513 81 aa10.3□□□□□ -0.76
NPM1-201ENST00000296930 CARD19Q96LW7 228 aa10.3□□□□□ -0.76
NPM1-201ENST00000296930 COX17Q14061 63 aa10.29□□□□□ -0.76
NPM1-201ENST00000296930 MIR7-3HGQ8N6C7 128 aa10.29□□□□□ -0.76
NPM1-201ENST00000296930 LINC00474Q9P2X8 69 aa10.29□□□□□ -0.76
NPM1-201ENST00000296930 Q6ZVH6 145 aa10.29□□□□□ -0.76
NPM1-201ENST00000296930 A0A096LNI7 61 aa10.28□□□□□ -0.76
NPM1-201ENST00000296930 EIF4EBP3O60516 100 aaPredicted RBP10.28□□□□□ -0.76
NPM1-201ENST00000296930 HINT1P49773 126 aaPredicted RBP10.28□□□□□ -0.76
NPM1-201ENST00000296930 LCE2AQ5TA79 106 aaPredicted RBP10.28□□□□□ -0.76
NPM1-201ENST00000296930 CEND1Q8N111 149 aa10.28□□□□□ -0.76
NPM1-201ENST00000296930 NPC2P61916 151 aa10.27□□□□□ -0.77
NPM1-201ENST00000296930 BVES-AS1Q5T3Y7 98 aa10.27□□□□□ -0.77
NPM1-201ENST00000296930 FXYD2P54710 66 aa10.26□□□□□ -0.77
NPM1-201ENST00000296930 RNF151Q2KHN1 245 aa10.26□□□□□ -0.77
NPM1-201ENST00000296930 SOSTDC1Q6X4U4 206 aa10.26□□□□□ -0.77
NPM1-201ENST00000296930 MUSTN1Q8IVN3 82 aa10.26□□□□□ -0.77
NPM1-201ENST00000296930 PTTG1IPP53801 180 aa10.26□□□□□ -0.77
NPM1-201ENST00000296930 LINC00308Q8TCZ7 52 aa10.26□□□□□ -0.77
NPM1-201ENST00000296930 M0R143 59 aa10.25□□□□□ -0.77
NPM1-201ENST00000296930 SNHG12Q9BXW3 62 aa10.25□□□□□ -0.77
NPM1-201ENST00000296930 MT1HL1P0DM35 61 aa10.24□□□□□ -0.77
NPM1-201ENST00000296930 IFITM1P13164 125 aa10.24□□□□□ -0.77
NPM1-201ENST00000296930 PLA2G2DQ9UNK4 145 aa10.24□□□□□ -0.77
NPM1-201ENST00000296930 HMCN2Q8NDA2 5059 aa10.24□□□□□ -0.77
NPM1-201ENST00000296930 NDUFC2-KCTD14E9PQ53 114 aa10.24□□□□□ -0.77
NPM1-201ENST00000296930 SND1-IT1Q9HBX3 110 aa10.23□□□□□ -0.77
NPM1-201ENST00000296930 TLX1NBP0CAT3 122 aa10.22□□□□□ -0.77
NPM1-201ENST00000296930 PRR3P79522 188 aaKnown RBP10.22□□□□□ -0.77
NPM1-201ENST00000296930 BATFQ16520 125 aa10.22□□□□□ -0.77
NPM1-201ENST00000296930 Q6ZRP5 223 aa10.22□□□□□ -0.77
NPM1-201ENST00000296930 PPDPFQ9H3Y8 114 aa10.22□□□□□ -0.77
NPM1-201ENST00000296930 LOC107984156A0A0G2JMH3 177 aa10.21□□□□□ -0.78
NPM1-201ENST00000296930 LOC107984640A0A0U1RRK4 108 aa10.21□□□□□ -0.78
NPM1-201ENST00000296930 A4D1N5 150 aa10.21□□□□□ -0.78
NPM1-201ENST00000296930 RPL24P83731 157 aaKnown RBP10.21□□□□□ -0.78
NPM1-201ENST00000296930 ARL17AQ8IVW1 177 aa10.21□□□□□ -0.78
NPM1-201ENST00000296930 COPS9Q8WXC6 57 aa10.2□□□□□ -0.78
NPM1-201ENST00000296930 XAGE1AQ9HD64 81 aa10.19□□□□□ -0.78
NPM1-201ENST00000296930 RPL18AQ02543 176 aaKnown RBP10.19□□□□□ -0.78
NPM1-201ENST00000296930 TMEM238LA0A1B0GVL6 79 aa10.18□□□□□ -0.78
NPM1-201ENST00000296930 A6NJY4 79 aa10.18□□□□□ -0.78
NPM1-201ENST00000296930 GAGE2BQ13066 116 aa10.18□□□□□ -0.78
NPM1-201ENST00000296930 GAGE2EQ4V326 116 aa10.18□□□□□ -0.78
NPM1-201ENST00000296930 NHP2Q9NX24 153 aaKnown RBP10.18□□□□□ -0.78
NPM1-201ENST00000296930 GAGE2DQ9UEU5 116 aa10.18□□□□□ -0.78
NPM1-201ENST00000296930 Q8NDZ9 215 aa10.17□□□□□ -0.78
NPM1-201ENST00000296930 A0A1B0GWB2 263 aa10.16□□□□□ -0.78
NPM1-201ENST00000296930 CFC1BP0CG36 223 aa10.16□□□□□ -0.78
NPM1-201ENST00000296930 CFC1P0CG37 223 aa10.16□□□□□ -0.78
NPM1-201ENST00000296930 C9orf129Q5T035 196 aaKnown RBP10.16□□□□□ -0.78
NPM1-201ENST00000296930 K7ERJ3 54 aa10.15□□□□□ -0.78
NPM1-201ENST00000296930 LINC01600Q96MT4 127 aa10.15□□□□□ -0.78
NPM1-201ENST00000296930 A6NDN8 102 aa10.14□□□□□ -0.79
NPM1-201ENST00000296930 SPINK6Q6UWN8 80 aa10.14□□□□□ -0.79
NPM1-201ENST00000296930 IGKV2-28A0A075B6P5 120 aa10.13□□□□□ -0.79
NPM1-201ENST00000296930 A0A0B4J2C4 111 aa10.13□□□□□ -0.79
NPM1-201ENST00000296930 NDUFC2O95298 119 aa10.13□□□□□ -0.79
NPM1-201ENST00000296930 IGKV2D-28P01615 120 aa10.13□□□□□ -0.79
NPM1-201ENST00000296930 A0A1W2PNN7 141 aa10.11□□□□□ -0.79
NPM1-201ENST00000296930 REG3GQ6UW15 175 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms