RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 LINC01556Q5JQF7 62 aa7.58□□□□□ -1.2
PBRM1-201ENST00000296302 PTPRBP23467 1997 aa7.58□□□□□ -1.2
PBRM1-201ENST00000296302 LINC00167Q96N53 147 aa7.58□□□□□ -1.2
PBRM1-201ENST00000296302 NUPR2A6NF83 97 aa7.57□□□□□ -1.2
PBRM1-201ENST00000296302 ABCA12Q86UK0 2595 aa7.56□□□□□ -1.2
PBRM1-201ENST00000296302 Q6ZRX8 168 aa7.55□□□□□ -1.2
PBRM1-201ENST00000296302 TLN2Q9Y4G6 2542 aa7.55□□□□□ -1.2
PBRM1-201ENST00000296302 A0A1B0GU69 56 aa7.55□□□□□ -1.2
PBRM1-201ENST00000296302 SPINK1P00995 79 aa7.54□□□□□ -1.2
PBRM1-201ENST00000296302 ACYP2P14621 99 aa7.54□□□□□ -1.2
PBRM1-201ENST00000296302 RETNLBQ9BQ08 111 aa7.54□□□□□ -1.2
PBRM1-201ENST00000296302 GVQW2A0A096LPI5 108 aaPredicted RBP7.54□□□□□ -1.2
PBRM1-201ENST00000296302 H3BNG1 76 aa7.53□□□□□ -1.2
PBRM1-201ENST00000296302 SMR3AQ99954 134 aa7.53□□□□□ -1.2
PBRM1-201ENST00000296302 TRAV22A0A0B4J277 110 aa7.53□□□□□ -1.2
PBRM1-201ENST00000296302 LINC00476Q8WZB0 136 aa7.53□□□□□ -1.2
PBRM1-201ENST00000296302 KLKP1Q107X0 134 aa7.53□□□□□ -1.2
PBRM1-201ENST00000296302 IGLV6-57P01721 117 aa7.52□□□□□ -1.21
PBRM1-201ENST00000296302 SPAG11AQ6PDA7 123 aa7.52□□□□□ -1.21
PBRM1-201ENST00000296302 USP9YO00507 2555 aaPredicted RBP7.52□□□□□ -1.21
PBRM1-201ENST00000296302 IGLV5-52A0A0A0MRZ9 124 aa7.52□□□□□ -1.21
PBRM1-201ENST00000296302 LY6G6CO95867 125 aa7.51□□□□□ -1.21
PBRM1-201ENST00000296302 X6R8D5 127 aa7.51□□□□□ -1.21
PBRM1-201ENST00000296302 SETD2Q9BYW2 2564 aaPredicted RBP7.51□□□□□ -1.21
PBRM1-201ENST00000296302 MUC4Q99102 2169 aa7.5□□□□□ -1.21
PBRM1-201ENST00000296302 TRBV7-4A0A0J9YYF1 115 aa7.5□□□□□ -1.21
PBRM1-201ENST00000296302 PKD1L2Q7Z442 2459 aa7.5□□□□□ -1.21
PBRM1-201ENST00000296302 EIF4EBP3O60516 100 aaPredicted RBP7.49□□□□□ -1.21
PBRM1-201ENST00000296302 CYP4F30PQ9H0H9 118 aa7.48□□□□□ -1.21
PBRM1-201ENST00000296302 JMJD1CQ15652 2540 aa7.48□□□□□ -1.21
PBRM1-201ENST00000296302 VPREB1P12018 145 aa7.47□□□□□ -1.21
PBRM1-201ENST00000296302 IGKV2D-30A0A075B6S6 120 aa7.47□□□□□ -1.21
PBRM1-201ENST00000296302 IGKV2-30P06310 120 aa7.47□□□□□ -1.21
PBRM1-201ENST00000296302 FSHBP01225 129 aa7.46□□□□□ -1.22
PBRM1-201ENST00000296302 C7orf65Q6ZTY9 151 aa7.46□□□□□ -1.22
PBRM1-201ENST00000296302 ST20-AS1Q8NBB2 130 aa7.46□□□□□ -1.22
PBRM1-201ENST00000296302 SERTAD4-AS1Q5TG53 156 aa7.45□□□□□ -1.22
PBRM1-201ENST00000296302 C8orf87E5RJ46 101 aa7.45□□□□□ -1.22
PBRM1-201ENST00000296302 COL27A1Q8IZC6 1860 aaPredicted RBP7.45□□□□□ -1.22
PBRM1-201ENST00000296302 A8MUN3 132 aa7.45□□□□□ -1.22
PBRM1-201ENST00000296302 H7BZZ5 65 aa7.45□□□□□ -1.22
PBRM1-201ENST00000296302 ZNF462Q96JM2 2506 aa7.44□□□□□ -1.22
PBRM1-201ENST00000296302 MOBPQ13875 183 aa7.44□□□□□ -1.22
PBRM1-201ENST00000296302 CEP295Q9C0D2 2601 aa7.44□□□□□ -1.22
PBRM1-201ENST00000296302 ATP11AUNQ6ZP68 121 aa7.43□□□□□ -1.22
PBRM1-201ENST00000296302 LINC00336Q6ZUF6 198 aa7.43□□□□□ -1.22
PBRM1-201ENST00000296302 K7EQZ3 153 aa7.43□□□□□ -1.22
PBRM1-201ENST00000296302 A8MWP4 228 aa7.42□□□□□ -1.22
PBRM1-201ENST00000296302 LINC00528Q8N1L1 170 aa7.42□□□□□ -1.22
PBRM1-201ENST00000296302 ANKRD11Q6UB99 2663 aaPredicted RBP7.42□□□□□ -1.22
PBRM1-201ENST00000296302 ZFYVE26Q68DK2 2539 aa7.42□□□□□ -1.22
PBRM1-201ENST00000296302 LOC101927531A0A1B0GV80 90 aa7.42□□□□□ -1.22
PBRM1-201ENST00000296302 C1orf134Q5TEV5 83 aa7.42□□□□□ -1.22
PBRM1-201ENST00000296302 Q6ZRP5 223 aa7.42□□□□□ -1.22
PBRM1-201ENST00000296302 RPL37AP61513 92 aaKnown RBP7.41□□□□□ -1.22
PBRM1-201ENST00000296302 EPM2AB3EWF7 344 aa7.41□□□□□ -1.22
PBRM1-201ENST00000296302 COL4A2P08572 1712 aa7.41□□□□□ -1.22
PBRM1-201ENST00000296302 COA5Q86WW8 74 aa7.41□□□□□ -1.22
PBRM1-201ENST00000296302 C16orf90A8MZG2 172 aa7.41□□□□□ -1.22
PBRM1-201ENST00000296302 LINC01600Q96MT4 127 aa7.41□□□□□ -1.22
PBRM1-201ENST00000296302 KCNQ1DNQ9H478 68 aa7.41□□□□□ -1.22
PBRM1-201ENST00000296302 Q8NAQ8 132 aa7.4□□□□□ -1.22
PBRM1-201ENST00000296302 LRRK2Q5S007 2527 aa7.4□□□□□ -1.22
PBRM1-201ENST00000296302 PHF5AQ7RTV0 110 aaKnown RBP7.38□□□□□ -1.23
PBRM1-201ENST00000296302 IGLV1-50A0A075B6I6 118 aa7.36□□□□□ -1.23
PBRM1-201ENST00000296302 CD164Q04900 197 aa7.36□□□□□ -1.23
PBRM1-201ENST00000296302 LINC00313P59037 77 aa7.36□□□□□ -1.23
PBRM1-201ENST00000296302 CENPFP49454 3210 aa7.35□□□□□ -1.23
PBRM1-201ENST00000296302 CSNK1G2-AS1Q8NCQ2 148 aa7.35□□□□□ -1.23
PBRM1-201ENST00000296302 MRPL34Q9BQ48 92 aaKnown RBP7.35□□□□□ -1.23
PBRM1-201ENST00000296302 PCSK5Q92824 1860 aa7.34□□□□□ -1.23
PBRM1-201ENST00000296302 SPACA4Q8TDM5 124 aa7.34□□□□□ -1.23
PBRM1-201ENST00000296302 FAM229AH3BQW9 127 aa7.34□□□□□ -1.23
PBRM1-201ENST00000296302 DNAH10OSP0CZ25 163 aa7.34□□□□□ -1.23
PBRM1-201ENST00000296302 PRR15Q8IV56 129 aa7.34□□□□□ -1.23
PBRM1-201ENST00000296302 PRR34Q9NV39 138 aa7.34□□□□□ -1.23
PBRM1-201ENST00000296302 EP400Q96L91 3159 aa7.33□□□□□ -1.24
PBRM1-201ENST00000296302 C9orf129Q5T035 196 aaKnown RBP7.33□□□□□ -1.24
PBRM1-201ENST00000296302 IGFL1Q6UW32 110 aa7.32□□□□□ -1.24
PBRM1-201ENST00000296302 MTORP42345 2549 aa7.32□□□□□ -1.24
PBRM1-201ENST00000296302 Q8N377 158 aa7.32□□□□□ -1.24
PBRM1-201ENST00000296302 OBSCN-AS1Q96MR7 158 aa7.32□□□□□ -1.24
PBRM1-201ENST00000296302 LINC00588Q9Y4M8 146 aa7.32□□□□□ -1.24
PBRM1-201ENST00000296302 UQCR11O14957 56 aa7.32□□□□□ -1.24
PBRM1-201ENST00000296302 MDFIQ99750 246 aa7.32□□□□□ -1.24
PBRM1-201ENST00000296302 FAM168BA1KXE4 195 aa7.31□□□□□ -1.24
PBRM1-201ENST00000296302 WIPF1O43516 503 aa7.3□□□□□ -1.24
PBRM1-201ENST00000296302 KTN1-AS1Q86SY8 53 aa7.3□□□□□ -1.24
PBRM1-201ENST00000296302 IGLV8-61A0A075B6I0 122 aa7.28□□□□□ -1.24
PBRM1-201ENST00000296302 LINC00612Q8N6U2 182 aa7.28□□□□□ -1.24
PBRM1-201ENST00000296302 C8orf17Q9NRJ1 99 aa7.28□□□□□ -1.24
PBRM1-201ENST00000296302 SPANXA2-OT1Q8N9U9 137 aa7.27□□□□□ -1.25
PBRM1-201ENST00000296302 C15orf56Q8N910 161 aa7.27□□□□□ -1.25
PBRM1-201ENST00000296302 PLA2G2DQ9UNK4 145 aa7.27□□□□□ -1.25
PBRM1-201ENST00000296302 NBDYA0A0U1RRE5 68 aa7.26□□□□□ -1.25
PBRM1-201ENST00000296302 CHTF8P0CG12 524 aa7.26□□□□□ -1.25
PBRM1-201ENST00000296302 GIG44P09565 113 aaPredicted RBP7.26□□□□□ -1.25
PBRM1-201ENST00000296302 RTL8CO15255 209 aa7.25□□□□□ -1.25
PBRM1-201ENST00000296302 TLX1NBP0CAT3 122 aa7.25□□□□□ -1.25
PBRM1-201ENST00000296302 ZNF575Q86XF7 245 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms