RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 ADAMTSL4-AS1Q5T5F5 129 aa14.15□□□□□ -0.14
LINC01116-201ENST00000295549 ARL17AQ8IVW1 177 aa14.15□□□□□ -0.14
LINC01116-201ENST00000295549 LINC00528Q8N1L1 170 aa14.15□□□□□ -0.14
LINC01116-201ENST00000295549 DAND5Q8N907 189 aa14.15□□□□□ -0.14
LINC01116-201ENST00000295549 VAMP8Q9BV40 100 aa14.15□□□□□ -0.14
LINC01116-201ENST00000295549 SCGB1D4Q6XE38 83 aa14.14□□□□□ -0.15
LINC01116-201ENST00000295549 KRTAP17-1Q9BYP8 105 aa14.14□□□□□ -0.15
LINC01116-201ENST00000295549 IGLV5-37A0A075B6J1 123 aa14.13□□□□□ -0.15
LINC01116-201ENST00000295549 M0QXV9 152 aa14.13□□□□□ -0.15
LINC01116-201ENST00000295549 C7orf33Q8WU49 177 aa14.13□□□□□ -0.15
LINC01116-201ENST00000295549 C22orf24Q9Y442 160 aa14.13□□□□□ -0.15
LINC01116-201ENST00000295549 PHF5AQ7RTV0 110 aaKnown RBP14.12□□□□□ -0.15
LINC01116-201ENST00000295549 TP73-AS1Q9UF72 201 aa14.12□□□□□ -0.15
LINC01116-201ENST00000295549 PAM16Q9Y3D7 125 aa14.12□□□□□ -0.15
LINC01116-201ENST00000295549 VPS13BQ7Z7G8 4022 aa14.12□□□□□ -0.15
LINC01116-201ENST00000295549 FAM229AH3BQW9 127 aa14.11□□□□□ -0.15
LINC01116-201ENST00000295549 RPL24P83731 157 aaKnown RBP14.11□□□□□ -0.15
LINC01116-201ENST00000295549 SPATA45Q537H7 98 aa14.11□□□□□ -0.15
LINC01116-201ENST00000295549 COX8AP10176 69 aa14.1□□□□□ -0.15
LINC01116-201ENST00000295549 VPREB1P12018 145 aa14.1□□□□□ -0.15
LINC01116-201ENST00000295549 BOD1L2Q8IYS8 172 aa14.09□□□□□ -0.15
LINC01116-201ENST00000295549 TMEM238C9JI98 176 aa14.08□□□□□ -0.15
LINC01116-201ENST00000295549 LBHQ53QV2 105 aaPredicted RBP14.08□□□□□ -0.15
LINC01116-201ENST00000295549 Q8NDZ9 215 aa14.08□□□□□ -0.15
LINC01116-201ENST00000295549 DLEU1O43261 78 aa14.07□□□□□ -0.16
LINC01116-201ENST00000295549 Q5VSD8 79 aa14.07□□□□□ -0.16
LINC01116-201ENST00000295549 MRPL55Q7Z7F7 128 aaKnown RBP14.07□□□□□ -0.16
LINC01116-201ENST00000295549 NKAPP1Q8N9T2 125 aa14.07□□□□□ -0.16
LINC01116-201ENST00000295549 MIEN1Q9BRT3 115 aa14.07□□□□□ -0.16
LINC01116-201ENST00000295549 SPANXDQ9BXN6 97 aa14.06□□□□□ -0.16
LINC01116-201ENST00000295549 SPANXCQ9NY87 97 aa14.06□□□□□ -0.16
LINC01116-201ENST00000295549 PLA2G1BP04054 148 aaKnown RBP14.05□□□□□ -0.16
LINC01116-201ENST00000295549 SOSTDC1Q6X4U4 206 aa14.05□□□□□ -0.16
LINC01116-201ENST00000295549 Q6ZVH6 145 aa14.05□□□□□ -0.16
LINC01116-201ENST00000295549 LINC00308Q8TCZ7 52 aa14.05□□□□□ -0.16
LINC01116-201ENST00000295549 EIF4EBP3O60516 100 aaPredicted RBP14.04□□□□□ -0.16
LINC01116-201ENST00000295549 RPL37AP61513 92 aaKnown RBP14.04□□□□□ -0.16
LINC01116-201ENST00000295549 C14orf144Q96I85 54 aa14.04□□□□□ -0.16
LINC01116-201ENST00000295549 NPC2P61916 151 aa14.03□□□□□ -0.16
LINC01116-201ENST00000295549 LINC00167Q96N53 147 aa14.03□□□□□ -0.16
LINC01116-201ENST00000295549 UBE2BP63146 152 aa14.02□□□□□ -0.16
LINC01116-201ENST00000295549 LOC105371267A0A1B0GV96 52 aa14.01□□□□□ -0.17
LINC01116-201ENST00000295549 NDUFC2O95298 119 aa14.01□□□□□ -0.17
LINC01116-201ENST00000295549 KRTAP10-4P60372 401 aaPredicted RBP14.01□□□□□ -0.17
LINC01116-201ENST00000295549 M0R378 163 aa14□□□□□ -0.17
LINC01116-201ENST00000295549 IFITM1P13164 125 aa14□□□□□ -0.17
LINC01116-201ENST00000295549 PRR3P79522 188 aaKnown RBP14□□□□□ -0.17
LINC01116-201ENST00000295549 S100A12P80511 92 aa14□□□□□ -0.17
LINC01116-201ENST00000295549 SLC25A34Q6PIV7 304 aa14□□□□□ -0.17
LINC01116-201ENST00000295549 KRTAP11-1Q8IUC1 163 aa14□□□□□ -0.17
LINC01116-201ENST00000295549 COPS9Q8WXC6 57 aa14□□□□□ -0.17
LINC01116-201ENST00000295549 PPDPFQ9H3Y8 114 aa14□□□□□ -0.17
LINC01116-201ENST00000295549 SPANXB1Q9NS25 103 aaPredicted RBP14□□□□□ -0.17
LINC01116-201ENST00000295549 PSORS1C2Q9UIG4 136 aa13.99□□□□□ -0.17
LINC01116-201ENST00000295549 GAGE10A6NGK3 116 aa13.98□□□□□ -0.17
LINC01116-201ENST00000295549 TRBV10-2A0A0K0K1G8 114 aa13.98□□□□□ -0.17
LINC01116-201ENST00000295549 KRTAP4-5Q9BYR2 181 aa13.98□□□□□ -0.17
LINC01116-201ENST00000295549 SRRM2Q9UQ35 2752 aaKnown RBP13.97□□□□□ -0.17
LINC01116-201ENST00000295549 RPL37AP8A6NKH3 93 aa13.97□□□□□ -0.17
LINC01116-201ENST00000295549 SMIM6P0DI80 62 aa13.97□□□□□ -0.17
LINC01116-201ENST00000295549 SRSF9Q13242 221 aaKnown RBP eCLIP13.97□□□□□ -0.17
LINC01116-201ENST00000295549 IGLV1-50A0A075B6I6 118 aa13.96□□□□□ -0.18
LINC01116-201ENST00000295549 NCR3O14931 201 aa13.95□□□□□ -0.18
LINC01116-201ENST00000295549 MUSTN1Q8IVN3 82 aa13.95□□□□□ -0.18
LINC01116-201ENST00000295549 HIGD1BQ9P298 99 aa13.94□□□□□ -0.18
LINC01116-201ENST00000295549 IGKV2-28A0A075B6P5 120 aa13.93□□□□□ -0.18
LINC01116-201ENST00000295549 IGKV2D-28P01615 120 aa13.93□□□□□ -0.18
LINC01116-201ENST00000295549 C1orf137Q5JT78 98 aa13.92□□□□□ -0.18
LINC01116-201ENST00000295549 C2orf91Q6ZV80 131 aa13.9□□□□□ -0.18
LINC01116-201ENST00000295549 LINC00518Q8N0U6 118 aa13.9□□□□□ -0.19
LINC01116-201ENST00000295549 HIST1H4GQ99525 98 aa13.9□□□□□ -0.19
LINC01116-201ENST00000295549 TRBV10-3A0A0K0K1G6 114 aa13.89□□□□□ -0.19
LINC01116-201ENST00000295549 IGLV6-57P01721 117 aa13.88□□□□□ -0.19
LINC01116-201ENST00000295549 DDTP30046 118 aa13.87□□□□□ -0.19
LINC01116-201ENST00000295549 KCNQ1DNQ9H478 68 aa13.87□□□□□ -0.19
LINC01116-201ENST00000295549 IGLV7-43P04211 117 aa13.86□□□□□ -0.19
LINC01116-201ENST00000295549 S100A7L2Q5SY68 101 aa13.86□□□□□ -0.19
LINC01116-201ENST00000295549 UQCR10Q9UDW1 63 aa13.86□□□□□ -0.19
LINC01116-201ENST00000295549 BCE1O60756 84 aa13.85□□□□□ -0.19
LINC01116-201ENST00000295549 REG3GQ6UW15 175 aa13.85□□□□□ -0.19
LINC01116-201ENST00000295549 TMEM126AQ9H061 195 aa13.85□□□□□ -0.19
LINC01116-201ENST00000295549 ABCA13Q86UQ4 5058 aa13.84□□□□□ -0.19
LINC01116-201ENST00000295549 HNRNPA3P51991 378 aaKnown RBP13.84□□□□□ -0.19
LINC01116-201ENST00000295549 PRYO14603 147 aa13.83□□□□□ -0.2
LINC01116-201ENST00000295549 LINC00337Q8N6G1 96 aa13.83□□□□□ -0.2
LINC01116-201ENST00000295549 TAL2Q16559 108 aa13.82□□□□□ -0.2
LINC01116-201ENST00000295549 A4D1N5 150 aa13.81□□□□□ -0.2
LINC01116-201ENST00000295549 INAFM2P0DMQ5 153 aa13.81□□□□□ -0.2
LINC01116-201ENST00000295549 SPRR1AP35321 89 aa13.8□□□□□ -0.2
LINC01116-201ENST00000295549 SPINK6Q6UWN8 80 aa13.8□□□□□ -0.2
LINC01116-201ENST00000295549 OR13C6PQ8NH95 151 aa13.8□□□□□ -0.2
LINC01116-201ENST00000295549 CBY1Q9Y3M2 126 aa13.8□□□□□ -0.2
LINC01116-201ENST00000295549 ZNF861PO60384 105 aa13.79□□□□□ -0.2
LINC01116-201ENST00000295549 C12orf57Q99622 126 aa13.79□□□□□ -0.2
LINC01116-201ENST00000295549 PKHD1L1Q86WI1 4243 aa13.79□□□□□ -0.2
LINC01116-201ENST00000295549 TRAV23DV6A0A075B6W5 121 aa13.77□□□□□ -0.21
LINC01116-201ENST00000295549 TRAV13-2A0A0B4J235 113 aa13.77□□□□□ -0.21
LINC01116-201ENST00000295549 KRTAP13-1Q8IUC0 172 aa13.77□□□□□ -0.21
LINC01116-201ENST00000295549 PRO1933Q9H354 126 aa13.77□□□□□ -0.21
LINC01116-201ENST00000295549 KRTAP4-16G5E9R7 235 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms