RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 C10orf25Q5T742 122 aa6.12□□□□□ -1.43
PDPN-201ENST00000294489 SMIM11BQ8TCY0 68 aa6.12□□□□□ -1.43
PDPN-201ENST00000294489 NTN5Q8WTR8 489 aaPredicted RBP6.12□□□□□ -1.43
PDPN-201ENST00000294489 LINC00588Q9Y4M8 146 aa6.12□□□□□ -1.43
PDPN-201ENST00000294489 DNAH1Q9P2D7 4330 aa6.12□□□□□ -1.43
PDPN-201ENST00000294489 GVQW2A0A096LPI5 108 aaPredicted RBP6.12□□□□□ -1.43
PDPN-201ENST00000294489 CARD19Q96LW7 228 aa6.12□□□□□ -1.43
PDPN-201ENST00000294489 TRACP01848 142 aa6.11□□□□□ -1.43
PDPN-201ENST00000294489 IGKV2D-24A0A075B6R9 120 aa6.11□□□□□ -1.43
PDPN-201ENST00000294489 H0YGX0 51 aa6.11□□□□□ -1.43
PDPN-201ENST00000294489 ANAPC13Q9BS18 74 aa6.11□□□□□ -1.43
PDPN-201ENST00000294489 CAMK2N2Q96S95 79 aa6.1□□□□□ -1.43
PDPN-201ENST00000294489 DNHD1Q96M86 4753 aa6.1□□□□□ -1.43
PDPN-201ENST00000294489 HIGD2BQ4VC39 106 aa6.1□□□□□ -1.43
PDPN-201ENST00000294489 TMEM126AQ9H061 195 aa6.1□□□□□ -1.43
PDPN-201ENST00000294489 DNAH7Q8WXX0 4024 aa6.1□□□□□ -1.43
PDPN-201ENST00000294489 C6orf48Q9UBA6 75 aa6.09□□□□□ -1.43
PDPN-201ENST00000294489 APLNQ9ULZ1 77 aa6.09□□□□□ -1.43
PDPN-201ENST00000294489 PRR3P79522 188 aaKnown RBP6.08□□□□□ -1.44
PDPN-201ENST00000294489 C2orf48Q96LS8 159 aa6.08□□□□□ -1.44
PDPN-201ENST00000294489 Q9HAA7 133 aa6.08□□□□□ -1.44
PDPN-201ENST00000294489 DNAL4O96015 105 aa6.08□□□□□ -1.44
PDPN-201ENST00000294489 FAM218AQ96MZ4 157 aa6.08□□□□□ -1.44
PDPN-201ENST00000294489 TEX49A0A1B0GTD5 131 aa6.08□□□□□ -1.44
PDPN-201ENST00000294489 S100A7L2Q5SY68 101 aa6.08□□□□□ -1.44
PDPN-201ENST00000294489 C15orf56Q8N910 161 aa6.08□□□□□ -1.44
PDPN-201ENST00000294489 PRKDCP78527 4128 aaKnown RBP6.07□□□□□ -1.44
PDPN-201ENST00000294489 NCR3O14931 201 aa6.06□□□□□ -1.44
PDPN-201ENST00000294489 BAALC-AS2P0C853 105 aa6.06□□□□□ -1.44
PDPN-201ENST00000294489 RMI2Q96E14 147 aa6.06□□□□□ -1.44
PDPN-201ENST00000294489 V9GYY9 64 aa6.06□□□□□ -1.44
PDPN-201ENST00000294489 Q6ZRU5 148 aa6.05□□□□□ -1.44
PDPN-201ENST00000294489 A0A087WYN8 130 aa6.05□□□□□ -1.44
PDPN-201ENST00000294489 MEGF8Q7Z7M0 2845 aa6.04□□□□□ -1.44
PDPN-201ENST00000294489 Q8NDZ9 215 aa6.04□□□□□ -1.44
PDPN-201ENST00000294489 XAGE1AQ9HD64 81 aa6.04□□□□□ -1.44
PDPN-201ENST00000294489 CSMD3Q7Z407 3707 aa6.04□□□□□ -1.44
PDPN-201ENST00000294489 NUPR2A6NF83 97 aa6.04□□□□□ -1.44
PDPN-201ENST00000294489 NDUFC2-KCTD14E9PQ53 114 aa6.04□□□□□ -1.44
PDPN-201ENST00000294489 LECT2O14960 151 aa6.04□□□□□ -1.44
PDPN-201ENST00000294489 SNCGO76070 127 aa6.04□□□□□ -1.44
PDPN-201ENST00000294489 SYCNQ0VAF6 134 aa6.04□□□□□ -1.44
PDPN-201ENST00000294489 RPL18AQ02543 176 aaKnown RBP6.03□□□□□ -1.44
PDPN-201ENST00000294489 A0A1B0GX51 115 aa6.03□□□□□ -1.44
PDPN-201ENST00000294489 C6orf99Q4VX62 202 aa6.02□□□□□ -1.45
PDPN-201ENST00000294489 CDIP1Q9H305 208 aa6.02□□□□□ -1.45
PDPN-201ENST00000294489 IGLV6-57P01721 117 aa6.02□□□□□ -1.45
PDPN-201ENST00000294489 GAGE2EQ4V326 116 aa6.01□□□□□ -1.45
PDPN-201ENST00000294489 GAGE2DQ9UEU5 116 aa6.01□□□□□ -1.45
PDPN-201ENST00000294489 USP17L23D6RBM5 183 aa6.01□□□□□ -1.45
PDPN-201ENST00000294489 UBE2DNLQ8IWF7 75 aa6.01□□□□□ -1.45
PDPN-201ENST00000294489 ORMDL1Q9P0S3 153 aa6.01□□□□□ -1.45
PDPN-201ENST00000294489 INAFM2P0DMQ5 153 aa6□□□□□ -1.45
PDPN-201ENST00000294489 PKIGQ9Y2B9 76 aa6□□□□□ -1.45
PDPN-201ENST00000294489 STAB2Q8WWQ8 2551 aa6□□□□□ -1.45
PDPN-201ENST00000294489 Q8N814 137 aa6□□□□□ -1.45
PDPN-201ENST00000294489 TRBV10-3A0A0K0K1G6 114 aa5.99□□□□□ -1.45
PDPN-201ENST00000294489 VPREB1P12018 145 aa5.99□□□□□ -1.45
PDPN-201ENST00000294489 Q6ZRP5 223 aa5.99□□□□□ -1.45
PDPN-201ENST00000294489 KRTAP1-5Q9BYS1 174 aa5.99□□□□□ -1.45
PDPN-201ENST00000294489 TRAV23DV6A0A075B6W5 121 aa5.99□□□□□ -1.45
PDPN-201ENST00000294489 FAM240AA0A1B0GVK7 77 aa5.99□□□□□ -1.45
PDPN-201ENST00000294489 C4orf48Q5BLP8 95 aa5.99□□□□□ -1.45
PDPN-201ENST00000294489 M0R378 163 aa5.99□□□□□ -1.45
PDPN-201ENST00000294489 SLPIP03973 132 aa5.99□□□□□ -1.45
PDPN-201ENST00000294489 C22orf24Q9Y442 160 aa5.99□□□□□ -1.45
PDPN-201ENST00000294489 DIRC1Q969H9 104 aa5.98□□□□□ -1.45
PDPN-201ENST00000294489 LINC00167Q96N53 147 aa5.98□□□□□ -1.45
PDPN-201ENST00000294489 PLECQ15149 4684 aaKnown RBP5.98□□□□□ -1.45
PDPN-201ENST00000294489 LYSTQ99698 3801 aa5.98□□□□□ -1.45
PDPN-201ENST00000294489 CASC10Q5T4H9 136 aa5.98□□□□□ -1.45
PDPN-201ENST00000294489 LINC00575Q6W349 94 aa5.98□□□□□ -1.45
PDPN-201ENST00000294489 FAM19A5Q7Z5A7 132 aaPredicted RBP5.98□□□□□ -1.45
PDPN-201ENST00000294489 STARD9Q9P2P6 4700 aa5.98□□□□□ -1.45
PDPN-201ENST00000294489 VPS13DQ5THJ4 4388 aa5.97□□□□□ -1.45
PDPN-201ENST00000294489 ACYP1P07311 99 aa5.97□□□□□ -1.45
PDPN-201ENST00000294489 TLX1NBP0CAT3 122 aa5.97□□□□□ -1.45
PDPN-201ENST00000294489 LOC107984640A0A0U1RRK4 108 aa5.97□□□□□ -1.45
PDPN-201ENST00000294489 CCDC179H3BU77 68 aa5.97□□□□□ -1.45
PDPN-201ENST00000294489 TMEM256-PLSCR3K7ERE1 68 aa5.97□□□□□ -1.45
PDPN-201ENST00000294489 XGP55808 180 aa5.97□□□□□ -1.45
PDPN-201ENST00000294489 hADV29S1A0JD25 119 aa5.96□□□□□ -1.45
PDPN-201ENST00000294489 ZNF73O43830 326 aaPredicted RBP5.96□□□□□ -1.45
PDPN-201ENST00000294489 MT-ATP8P03928 68 aa5.96□□□□□ -1.46
PDPN-201ENST00000294489 C9orf129Q5T035 196 aaKnown RBP5.96□□□□□ -1.46
PDPN-201ENST00000294489 NKAPP1Q8N9T2 125 aa5.96□□□□□ -1.46
PDPN-201ENST00000294489 PSCAO43653 123 aa5.95□□□□□ -1.46
PDPN-201ENST00000294489 TRBV7-6A0A0J9YX20 115 aa5.94□□□□□ -1.46
PDPN-201ENST00000294489 COX7BP24311 80 aa5.94□□□□□ -1.46
PDPN-201ENST00000294489 OBSCN-AS1Q96MR7 158 aa5.94□□□□□ -1.46
PDPN-201ENST00000294489 JMJD7-PLA2G4BH0Y9G9 81 aa5.94□□□□□ -1.46
PDPN-201ENST00000294489 DNAH6Q9C0G6 4158 aa5.93□□□□□ -1.46
PDPN-201ENST00000294489 NBDYA0A0U1RRE5 68 aa5.93□□□□□ -1.46
PDPN-201ENST00000294489 H3BQ85 93 aa5.93□□□□□ -1.46
PDPN-201ENST00000294489 TTC32Q5I0X7 151 aa5.93□□□□□ -1.46
PDPN-201ENST00000294489 GAGE2AQ6NT46 116 aa5.93□□□□□ -1.46
PDPN-201ENST00000294489 C14orf132Q9NPU4 83 aa5.93□□□□□ -1.46
PDPN-201ENST00000294489 PLA2G2DQ9UNK4 145 aa5.93□□□□□ -1.46
PDPN-201ENST00000294489 ELOF1P60002 83 aaKnown RBP5.93□□□□□ -1.46
PDPN-201ENST00000294489 GHRHP01286 108 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms