RNA–Protein interactions for RNA: ENST00000293845.7

CCDC42-201, Transcript of coiled-coil domain containing 42, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC42, Length 1,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-201ENST00000293845 IGLV5-37A0A075B6J1 123 aa8.27□□□□□ -1.09
CCDC42-201ENST00000293845 LOC107984156A0A0G2JMH3 177 aa8.27□□□□□ -1.09
CCDC42-201ENST00000293845 M0QXV9 152 aa8.27□□□□□ -1.09
CCDC42-201ENST00000293845 ARL17AQ8IVW1 177 aa8.27□□□□□ -1.09
CCDC42-201ENST00000293845 LITAFQ99732 161 aa8.27□□□□□ -1.09
CCDC42-201ENST00000293845 TP73-AS1Q9UF72 201 aa8.27□□□□□ -1.09
CCDC42-201ENST00000293845 VPS13BQ7Z7G8 4022 aa8.27□□□□□ -1.09
CCDC42-201ENST00000293845 FAM229AH3BQW9 127 aa8.26□□□□□ -1.09
CCDC42-201ENST00000293845 Q5VSD8 79 aa8.26□□□□□ -1.09
CCDC42-201ENST00000293845 PHF5AQ7RTV0 110 aaKnown RBP8.26□□□□□ -1.09
CCDC42-201ENST00000293845 C7orf33Q8WU49 177 aa8.26□□□□□ -1.09
CCDC42-201ENST00000293845 VPREB1P12018 145 aa8.25□□□□□ -1.09
CCDC42-201ENST00000293845 ADAMTSL4-AS1Q5T5F5 129 aa8.25□□□□□ -1.09
CCDC42-201ENST00000293845 DAND5Q8N907 189 aa8.25□□□□□ -1.09
CCDC42-201ENST00000293845 C22orf24Q9Y442 160 aa8.25□□□□□ -1.09
CCDC42-201ENST00000293845 RPL24P83731 157 aaKnown RBP8.24□□□□□ -1.09
CCDC42-201ENST00000293845 SCGB1D4Q6XE38 83 aa8.24□□□□□ -1.09
CCDC42-201ENST00000293845 Q8NDZ9 215 aa8.24□□□□□ -1.09
CCDC42-201ENST00000293845 VAMP8Q9BV40 100 aa8.24□□□□□ -1.09
CCDC42-201ENST00000293845 PLA2G1BP04054 148 aaKnown RBP8.23□□□□□ -1.09
CCDC42-201ENST00000293845 KRTAP10-4P60372 401 aaPredicted RBP8.23□□□□□ -1.09
CCDC42-201ENST00000293845 MRPL55Q7Z7F7 128 aaKnown RBP8.23□□□□□ -1.09
CCDC42-201ENST00000293845 PAM16Q9Y3D7 125 aa8.23□□□□□ -1.09
CCDC42-201ENST00000293845 TMEM238C9JI98 176 aa8.22□□□□□ -1.09
CCDC42-201ENST00000293845 COX8AP10176 69 aa8.22□□□□□ -1.09
CCDC42-201ENST00000293845 RPL37AP61513 92 aaKnown RBP8.22□□□□□ -1.09
CCDC42-201ENST00000293845 SPATA45Q537H7 98 aa8.22□□□□□ -1.09
CCDC42-201ENST00000293845 LBHQ53QV2 105 aaPredicted RBP8.22□□□□□ -1.09
CCDC42-201ENST00000293845 BOD1L2Q8IYS8 172 aa8.22□□□□□ -1.09
CCDC42-201ENST00000293845 NKAPP1Q8N9T2 125 aa8.22□□□□□ -1.09
CCDC42-201ENST00000293845 MIEN1Q9BRT3 115 aa8.22□□□□□ -1.09
CCDC42-201ENST00000293845 SOSTDC1Q6X4U4 206 aa8.22□□□□□ -1.09
CCDC42-201ENST00000293845 SPANXDQ9BXN6 97 aa8.22□□□□□ -1.09
CCDC42-201ENST00000293845 SPANXCQ9NY87 97 aa8.22□□□□□ -1.09
CCDC42-201ENST00000293845 DLEU1O43261 78 aa8.21□□□□□ -1.1
CCDC42-201ENST00000293845 Q6ZVH6 145 aa8.21□□□□□ -1.1
CCDC42-201ENST00000293845 KRTAP11-1Q8IUC1 163 aa8.21□□□□□ -1.1
CCDC42-201ENST00000293845 LINC00308Q8TCZ7 52 aa8.21□□□□□ -1.1
CCDC42-201ENST00000293845 KRTAP4-5Q9BYR2 181 aa8.21□□□□□ -1.1
CCDC42-201ENST00000293845 EIF4EBP3O60516 100 aaPredicted RBP8.2□□□□□ -1.1
CCDC42-201ENST00000293845 NDUFC2O95298 119 aa8.2□□□□□ -1.1
CCDC42-201ENST00000293845 UBE2BP63146 152 aa8.2□□□□□ -1.1
CCDC42-201ENST00000293845 PRR3P79522 188 aaKnown RBP8.2□□□□□ -1.1
CCDC42-201ENST00000293845 LINC00167Q96N53 147 aa8.2□□□□□ -1.1
CCDC42-201ENST00000293845 PPDPFQ9H3Y8 114 aa8.2□□□□□ -1.1
CCDC42-201ENST00000293845 ABCA13Q86UQ4 5058 aa8.19□□□□□ -1.1
CCDC42-201ENST00000293845 SPANXB1Q9NS25 103 aaPredicted RBP8.19□□□□□ -1.1
CCDC42-201ENST00000293845 PSORS1C2Q9UIG4 136 aa8.19□□□□□ -1.1
CCDC42-201ENST00000293845 M0R378 163 aa8.18□□□□□ -1.1
CCDC42-201ENST00000293845 IFITM1P13164 125 aa8.18□□□□□ -1.1
CCDC42-201ENST00000293845 NPC2P61916 151 aa8.18□□□□□ -1.1
CCDC42-201ENST00000293845 TRBV10-2A0A0K0K1G8 114 aa8.17□□□□□ -1.1
CCDC42-201ENST00000293845 GAGE10A6NGK3 116 aa8.17□□□□□ -1.1
CCDC42-201ENST00000293845 COPS9Q8WXC6 57 aa8.17□□□□□ -1.1
CCDC42-201ENST00000293845 C14orf144Q96I85 54 aa8.17□□□□□ -1.1
CCDC42-201ENST00000293845 IGLV1-50A0A075B6I6 118 aa8.16□□□□□ -1.1
CCDC42-201ENST00000293845 RPL37AP8A6NKH3 93 aa8.16□□□□□ -1.1
CCDC42-201ENST00000293845 NCR3O14931 201 aa8.16□□□□□ -1.1
CCDC42-201ENST00000293845 LOC105371267A0A1B0GV96 52 aa8.15□□□□□ -1.1
CCDC42-201ENST00000293845 C1orf137Q5JT78 98 aa8.15□□□□□ -1.1
CCDC42-201ENST00000293845 SLC25A34Q6PIV7 304 aa8.15□□□□□ -1.1
CCDC42-201ENST00000293845 SRRM2Q9UQ35 2752 aaKnown RBP8.15□□□□□ -1.1
CCDC42-201ENST00000293845 SMIM6P0DI80 62 aa8.14□□□□□ -1.11
CCDC42-201ENST00000293845 S100A12P80511 92 aa8.14□□□□□ -1.11
CCDC42-201ENST00000293845 HIGD1BQ9P298 99 aa8.14□□□□□ -1.11
CCDC42-201ENST00000293845 PKHD1L1Q86WI1 4243 aa8.14□□□□□ -1.11
CCDC42-201ENST00000293845 IGKV2-28A0A075B6P5 120 aa8.13□□□□□ -1.11
CCDC42-201ENST00000293845 IGKV2D-28P01615 120 aa8.13□□□□□ -1.11
CCDC42-201ENST00000293845 SRSF9Q13242 221 aaKnown RBP eCLIP8.13□□□□□ -1.11
CCDC42-201ENST00000293845 MUSTN1Q8IVN3 82 aa8.13□□□□□ -1.11
CCDC42-201ENST00000293845 HNRNPA3P51991 378 aaKnown RBP8.12□□□□□ -1.11
CCDC42-201ENST00000293845 TRBV10-3A0A0K0K1G6 114 aa8.11□□□□□ -1.11
CCDC42-201ENST00000293845 IGLV7-43P04211 117 aa8.11□□□□□ -1.11
CCDC42-201ENST00000293845 C2orf91Q6ZV80 131 aa8.11□□□□□ -1.11
CCDC42-201ENST00000293845 LINC00518Q8N0U6 118 aa8.11□□□□□ -1.11
CCDC42-201ENST00000293845 PRYO14603 147 aa8.1□□□□□ -1.11
CCDC42-201ENST00000293845 BCE1O60756 84 aa8.1□□□□□ -1.11
CCDC42-201ENST00000293845 IGLV6-57P01721 117 aa8.1□□□□□ -1.11
CCDC42-201ENST00000293845 INAFM2P0DMQ5 153 aa8.1□□□□□ -1.11
CCDC42-201ENST00000293845 DDTP30046 118 aa8.1□□□□□ -1.11
CCDC42-201ENST00000293845 TMEM126AQ9H061 195 aa8.1□□□□□ -1.11
CCDC42-201ENST00000293845 KCNQ1DNQ9H478 68 aa8.1□□□□□ -1.11
CCDC42-201ENST00000293845 FLG2Q5D862 2391 aaPredicted RBP8.1□□□□□ -1.11
CCDC42-201ENST00000293845 REG3GQ6UW15 175 aa8.1□□□□□ -1.11
CCDC42-201ENST00000293845 PCLOQ9Y6V0 5065 aa8.09□□□□□ -1.11
CCDC42-201ENST00000293845 SPRR1AP35321 89 aa8.09□□□□□ -1.12
CCDC42-201ENST00000293845 S100A7L2Q5SY68 101 aa8.09□□□□□ -1.12
CCDC42-201ENST00000293845 SPINK6Q6UWN8 80 aa8.09□□□□□ -1.12
CCDC42-201ENST00000293845 HIST1H4GQ99525 98 aa8.09□□□□□ -1.12
CCDC42-201ENST00000293845 LINC00337Q8N6G1 96 aa8.08□□□□□ -1.12
CCDC42-201ENST00000293845 UQCR10Q9UDW1 63 aa8.08□□□□□ -1.12
CCDC42-201ENST00000293845 ZNF861PO60384 105 aa8.07□□□□□ -1.12
CCDC42-201ENST00000293845 TAL2Q16559 108 aa8.07□□□□□ -1.12
CCDC42-201ENST00000293845 KRTAP13-1Q8IUC0 172 aa8.07□□□□□ -1.12
CCDC42-201ENST00000293845 A4D1N5 150 aa8.06□□□□□ -1.12
CCDC42-201ENST00000293845 KRTAP4-16G5E9R7 235 aaPredicted RBP8.06□□□□□ -1.12
CCDC42-201ENST00000293845 CBY1Q9Y3M2 126 aa8.06□□□□□ -1.12
CCDC42-201ENST00000293845 TRAV23DV6A0A075B6W5 121 aa8.05□□□□□ -1.12
CCDC42-201ENST00000293845 RPL28P46779 137 aaKnown RBP8.05□□□□□ -1.12
CCDC42-201ENST00000293845 TRAV13-2A0A0B4J235 113 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms