RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 KPRPQ5T749 579 aaPredicted RBP11.26□□□□□ -0.61
VPS54-201ENST00000272322 H0YGX0 51 aa11.26□□□□□ -0.61
VPS54-201ENST00000272322 LYPD5Q6UWN5 251 aa11.26□□□□□ -0.61
VPS54-201ENST00000272322 WFDC9Q8NEX5 89 aa11.26□□□□□ -0.61
VPS54-201ENST00000272322 A0A087WVE0 104 aa11.25□□□□□ -0.61
VPS54-201ENST00000272322 LINC00846Q9NV44 126 aa11.25□□□□□ -0.61
VPS54-201ENST00000272322 ORMDL1Q9P0S3 153 aa11.25□□□□□ -0.61
VPS54-201ENST00000272322 LELP1Q5T871 98 aa11.24□□□□□ -0.61
VPS54-201ENST00000272322 INAFM2P0DMQ5 153 aa11.24□□□□□ -0.61
VPS54-201ENST00000272322 DEFB121Q5J5C9 76 aa11.23□□□□□ -0.61
VPS54-201ENST00000272322 TMEM126AQ9H061 195 aa11.23□□□□□ -0.61
VPS54-201ENST00000272322 A0A0J9YWU9 116 aa11.22□□□□□ -0.61
VPS54-201ENST00000272322 ZNF561-AS1K7EIQ3 104 aa11.22□□□□□ -0.61
VPS54-201ENST00000272322 IGKV2D-24A0A075B6R9 120 aa11.21□□□□□ -0.61
VPS54-201ENST00000272322 FAM240AA0A1B0GVK7 77 aa11.21□□□□□ -0.62
VPS54-201ENST00000272322 HIST1H4AP62805 103 aaKnown RBP11.21□□□□□ -0.62
VPS54-201ENST00000272322 LINC01600Q96MT4 127 aa11.21□□□□□ -0.62
VPS54-201ENST00000272322 LAMTOR3Q9UHA4 124 aa11.21□□□□□ -0.62
VPS54-201ENST00000272322 Q8N814 137 aa11.2□□□□□ -0.62
VPS54-201ENST00000272322 CAMK2N2Q96S95 79 aa11.2□□□□□ -0.62
VPS54-201ENST00000272322 C6orf48Q9UBA6 75 aa11.19□□□□□ -0.62
VPS54-201ENST00000272322 LINC00643Q86TS7 51 aa11.18□□□□□ -0.62
VPS54-201ENST00000272322 TRBV10-3A0A0K0K1G6 114 aa11.18□□□□□ -0.62
VPS54-201ENST00000272322 ESRGQ1W209 222 aa11.18□□□□□ -0.62
VPS54-201ENST00000272322 KRTAP24-1Q3LI83 254 aa11.18□□□□□ -0.62
VPS54-201ENST00000272322 ACYP1P07311 99 aa11.16□□□□□ -0.62
VPS54-201ENST00000272322 Q6ZQY7 126 aa11.16□□□□□ -0.62
VPS54-201ENST00000272322 KLK5Q9Y337 293 aaPredicted RBP11.15□□□□□ -0.62
VPS54-201ENST00000272322 DEFB131BA0A096LNP1 70 aa11.14□□□□□ -0.63
VPS54-201ENST00000272322 Q6ZRU5 148 aa11.14□□□□□ -0.63
VPS54-201ENST00000272322 M0R2N4 97 aa11.13□□□□□ -0.63
VPS54-201ENST00000272322 Q6Q795 121 aa11.12□□□□□ -0.63
VPS54-201ENST00000272322 COX17Q14061 63 aa11.12□□□□□ -0.63
VPS54-201ENST00000272322 TRBV7-7A0A0K0K1E9 115 aa11.11□□□□□ -0.63
VPS54-201ENST00000272322 hADV29S1A0JD25 119 aa11.11□□□□□ -0.63
VPS54-201ENST00000272322 C11orf45Q8TAV5 145 aa11.11□□□□□ -0.63
VPS54-201ENST00000272322 PRR34Q9NV39 138 aa11.11□□□□□ -0.63
VPS54-201ENST00000272322 C1orf43Q9BWL3 253 aa11.11□□□□□ -0.63
VPS54-201ENST00000272322 LINC01561Q8N1V8 128 aa11.09□□□□□ -0.63
VPS54-201ENST00000272322 TMEM256-PLSCR3K7ERE1 68 aa11.08□□□□□ -0.64
VPS54-201ENST00000272322 DEFB105AQ8NG35 78 aa11.08□□□□□ -0.64
VPS54-201ENST00000272322 NDUFC2O95298 119 aa11.08□□□□□ -0.64
VPS54-201ENST00000272322 LINC00575Q6W349 94 aa11.08□□□□□ -0.64
VPS54-201ENST00000272322 FAM19A1Q7Z5A9 133 aa11.07□□□□□ -0.64
VPS54-201ENST00000272322 SCXQ7RTU7 201 aa11.07□□□□□ -0.64
VPS54-201ENST00000272322 HAMPP81172 84 aa11.07□□□□□ -0.64
VPS54-201ENST00000272322 C9orf153Q5TBE3 101 aa11.07□□□□□ -0.64
VPS54-201ENST00000272322 TRAV23DV6A0A075B6W5 121 aa11.06□□□□□ -0.64
VPS54-201ENST00000272322 A0A1B0GX51 115 aa11.05□□□□□ -0.64
VPS54-201ENST00000272322 SMIM20Q8N5G0 67 aa11.05□□□□□ -0.64
VPS54-201ENST00000272322 CASC10Q5T4H9 136 aa11.05□□□□□ -0.64
VPS54-201ENST00000272322 RBM3P98179 157 aaKnown RBP11.04□□□□□ -0.64
VPS54-201ENST00000272322 RPL37AP8A6NKH3 93 aa11.04□□□□□ -0.64
VPS54-201ENST00000272322 CCKP06307 115 aa11.04□□□□□ -0.64
VPS54-201ENST00000272322 DIRC1Q969H9 104 aa11.04□□□□□ -0.64
VPS54-201ENST00000272322 PPDPFQ9H3Y8 114 aa11.04□□□□□ -0.64
VPS54-201ENST00000272322 ZNF73O43830 326 aaPredicted RBP11.03□□□□□ -0.64
VPS54-201ENST00000272322 Q6ZRP5 223 aa11.03□□□□□ -0.64
VPS54-201ENST00000272322 C15orf56Q8N910 161 aa11.03□□□□□ -0.64
VPS54-201ENST00000272322 IGLV6-57P01721 117 aa11.01□□□□□ -0.65
VPS54-201ENST00000272322 JMJD7-PLA2G4BH0Y9G9 81 aa11□□□□□ -0.65
VPS54-201ENST00000272322 SRRM2Q9UQ35 2752 aaKnown RBP11□□□□□ -0.65
VPS54-201ENST00000272322 OBSCN-AS1Q96MR7 158 aa11□□□□□ -0.65
VPS54-201ENST00000272322 LYSTQ99698 3801 aa11□□□□□ -0.65
VPS54-201ENST00000272322 FAM168BA1KXE4 195 aa10.99□□□□□ -0.65
VPS54-201ENST00000272322 DSCR8Q96T75 97 aa10.99□□□□□ -0.65
VPS54-201ENST00000272322 COX7BP24311 80 aa10.99□□□□□ -0.65
VPS54-201ENST00000272322 IMUPQ9GZP8 106 aa10.99□□□□□ -0.65
VPS54-201ENST00000272322 CYSTM1Q9H1C7 97 aa10.98□□□□□ -0.65
VPS54-201ENST00000272322 C3orf22Q8N5N4 141 aa10.97□□□□□ -0.65
VPS54-201ENST00000272322 UBL5Q9BZL1 73 aa10.97□□□□□ -0.65
VPS54-201ENST00000272322 SYCNQ0VAF6 134 aa10.97□□□□□ -0.65
VPS54-201ENST00000272322 VPREB1P12018 145 aa10.97□□□□□ -0.65
VPS54-201ENST00000272322 USP17L23D6RBM5 183 aa10.96□□□□□ -0.65
VPS54-201ENST00000272322 SERTAD4-AS1Q5TG53 156 aa10.96□□□□□ -0.66
VPS54-201ENST00000272322 KRTAP26-1Q6PEX3 210 aa10.96□□□□□ -0.66
VPS54-201ENST00000272322 NDUFC2-KCTD14E9PQ53 114 aa10.95□□□□□ -0.66
VPS54-201ENST00000272322 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.95□□□□□ -0.66
VPS54-201ENST00000272322 NKAPP1Q8N9T2 125 aa10.95□□□□□ -0.66
VPS54-201ENST00000272322 COL7A1Q02388 2944 aa10.95□□□□□ -0.66
VPS54-201ENST00000272322 Q6JHZ5 121 aa10.93□□□□□ -0.66
VPS54-201ENST00000272322 EGFEM1PQ0D2K5 195 aa10.93□□□□□ -0.66
VPS54-201ENST00000272322 LINC00167Q96N53 147 aa10.93□□□□□ -0.66
VPS54-201ENST00000272322 WIPF1O43516 503 aa10.93□□□□□ -0.66
VPS54-201ENST00000272322 LINC00588Q9Y4M8 146 aa10.93□□□□□ -0.66
VPS54-201ENST00000272322 Q8N9L7 120 aa10.92□□□□□ -0.66
VPS54-201ENST00000272322 Q6ZQT0 140 aa10.92□□□□□ -0.66
VPS54-201ENST00000272322 UPK3BQ9BT76 320 aa10.92□□□□□ -0.66
VPS54-201ENST00000272322 C3orf84H3BNL1 204 aa10.91□□□□□ -0.66
VPS54-201ENST00000272322 FAM19A5Q7Z5A7 132 aaPredicted RBP10.91□□□□□ -0.66
VPS54-201ENST00000272322 CMYA5Q8N3K9 4069 aa10.91□□□□□ -0.66
VPS54-201ENST00000272322 GHRHP01286 108 aa10.9□□□□□ -0.66
VPS54-201ENST00000272322 IGKV2-24A0A0C4DH68 120 aa10.9□□□□□ -0.66
VPS54-201ENST00000272322 M0R378 163 aa10.9□□□□□ -0.66
VPS54-201ENST00000272322 UQCRQO14949 82 aa10.89□□□□□ -0.67
VPS54-201ENST00000272322 GVQW2A0A096LPI5 108 aaPredicted RBP10.89□□□□□ -0.67
VPS54-201ENST00000272322 COX7CP15954 63 aa10.89□□□□□ -0.67
VPS54-201ENST00000272322 LINC01556Q5JQF7 62 aa10.89□□□□□ -0.67
VPS54-201ENST00000272322 ATOX1O00244 68 aa10.89□□□□□ -0.67
VPS54-201ENST00000272322 MUC7Q8TAX7 377 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms