RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 KRTAP11-1Q8IUC1 163 aa7.93□□□□□ -1.14
SS18-202ENST00000269138 TTTY13Q9BZ97 58 aa7.93□□□□□ -1.14
SS18-202ENST00000269138 C22orf24Q9Y442 160 aa7.93□□□□□ -1.14
SS18-202ENST00000269138 MIR7-3HGQ8N6C7 128 aa7.92□□□□□ -1.14
SS18-202ENST00000269138 Q8NDZ9 215 aa7.92□□□□□ -1.14
SS18-202ENST00000269138 PLA2G2DQ9UNK4 145 aa7.92□□□□□ -1.14
SS18-202ENST00000269138 ABCA13Q86UQ4 5058 aa7.91□□□□□ -1.14
SS18-202ENST00000269138 A0A0J9YXY3 114 aa7.91□□□□□ -1.14
SS18-202ENST00000269138 HNRNPA3P51991 378 aaKnown RBP7.91□□□□□ -1.14
SS18-202ENST00000269138 PRR3P79522 188 aaKnown RBP7.91□□□□□ -1.14
SS18-202ENST00000269138 DAND5Q8N907 189 aa7.91□□□□□ -1.14
SS18-202ENST00000269138 LINC00587B1AMM8 73 aa7.9□□□□□ -1.14
SS18-202ENST00000269138 SCGB1D1O95968 90 aa7.9□□□□□ -1.14
SS18-202ENST00000269138 INAFM2P0DMQ5 153 aa7.9□□□□□ -1.14
SS18-202ENST00000269138 ZNF815PA8K554 130 aa7.89□□□□□ -1.15
SS18-202ENST00000269138 VPREB1P12018 145 aa7.89□□□□□ -1.15
SS18-202ENST00000269138 AKR1D1P51857 326 aa7.89□□□□□ -1.15
SS18-202ENST00000269138 PSORS1C2Q9UIG4 136 aa7.89□□□□□ -1.15
SS18-202ENST00000269138 IGLV5-37A0A075B6J1 123 aa7.88□□□□□ -1.15
SS18-202ENST00000269138 GAGE10A6NGK3 116 aa7.88□□□□□ -1.15
SS18-202ENST00000269138 UBE2BP63146 152 aa7.88□□□□□ -1.15
SS18-202ENST00000269138 ADAMTSL4-AS1Q5T5F5 129 aa7.88□□□□□ -1.15
SS18-202ENST00000269138 MRPL55Q7Z7F7 128 aaKnown RBP7.88□□□□□ -1.15
SS18-202ENST00000269138 TP73-AS1Q9UF72 201 aa7.88□□□□□ -1.15
SS18-202ENST00000269138 PCP2Q8IVA1 136 aa7.88□□□□□ -1.15
SS18-202ENST00000269138 NKAPP1Q8N9T2 125 aa7.88□□□□□ -1.15
SS18-202ENST00000269138 LINC00167Q96N53 147 aa7.88□□□□□ -1.15
SS18-202ENST00000269138 RPL37AP8A6NKH3 93 aa7.87□□□□□ -1.15
SS18-202ENST00000269138 LBHQ53QV2 105 aaPredicted RBP7.87□□□□□ -1.15
SS18-202ENST00000269138 BOD1L2Q8IYS8 172 aa7.87□□□□□ -1.15
SS18-202ENST00000269138 LITAFQ99732 161 aa7.87□□□□□ -1.15
SS18-202ENST00000269138 EIF4EBP3O60516 100 aaPredicted RBP7.86□□□□□ -1.15
SS18-202ENST00000269138 RPL24P83731 157 aaKnown RBP7.86□□□□□ -1.15
SS18-202ENST00000269138 C1orf137Q5JT78 98 aa7.86□□□□□ -1.15
SS18-202ENST00000269138 FLG2Q5D862 2391 aaPredicted RBP7.85□□□□□ -1.15
SS18-202ENST00000269138 PCLOQ9Y6V0 5065 aa7.85□□□□□ -1.15
SS18-202ENST00000269138 HSBP1L1C9JCN9 74 aa7.84□□□□□ -1.15
SS18-202ENST00000269138 NPC2P61916 151 aa7.84□□□□□ -1.15
SS18-202ENST00000269138 SOSTDC1Q6X4U4 206 aa7.84□□□□□ -1.15
SS18-202ENST00000269138 LOC107984156A0A0G2JMH3 177 aa7.83□□□□□ -1.16
SS18-202ENST00000269138 TIMM17BO60830 172 aa7.83□□□□□ -1.16
SS18-202ENST00000269138 ARL17AQ8IVW1 177 aa7.83□□□□□ -1.16
SS18-202ENST00000269138 NCR3O14931 201 aa7.83□□□□□ -1.16
SS18-202ENST00000269138 JOSD1Q15040 202 aaPredicted RBP7.83□□□□□ -1.16
SS18-202ENST00000269138 IGKV2-28A0A075B6P5 120 aa7.82□□□□□ -1.16
SS18-202ENST00000269138 IGKV2D-28P01615 120 aa7.82□□□□□ -1.16
SS18-202ENST00000269138 SRSF9Q13242 221 aaKnown RBP eCLIP7.82□□□□□ -1.16
SS18-202ENST00000269138 SCGB1D4Q6XE38 83 aa7.82□□□□□ -1.16
SS18-202ENST00000269138 PKHD1L1Q86WI1 4243 aa7.82□□□□□ -1.16
SS18-202ENST00000269138 M0R378 163 aa7.81□□□□□ -1.16
SS18-202ENST00000269138 IGLV7-43P04211 117 aa7.81□□□□□ -1.16
SS18-202ENST00000269138 IGLV1-50A0A075B6I6 118 aa7.8□□□□□ -1.16
SS18-202ENST00000269138 LINC00308Q8TCZ7 52 aa7.8□□□□□ -1.16
SS18-202ENST00000269138 MIEN1Q9BRT3 115 aa7.8□□□□□ -1.16
SS18-202ENST00000269138 KRTAP3-3Q9BYR6 98 aa7.8□□□□□ -1.16
SS18-202ENST00000269138 KRTAP3-2Q9BYR7 98 aa7.8□□□□□ -1.16
SS18-202ENST00000269138 TMEM238C9JI98 176 aa7.78□□□□□ -1.16
SS18-202ENST00000269138 PYY3Q5JQD4 70 aa7.78□□□□□ -1.16
SS18-202ENST00000269138 PAM16Q9Y3D7 125 aa7.78□□□□□ -1.16
SS18-202ENST00000269138 SPINK6Q6UWN8 80 aa7.78□□□□□ -1.16
SS18-202ENST00000269138 SPANXDQ9BXN6 97 aa7.78□□□□□ -1.16
SS18-202ENST00000269138 SPANXCQ9NY87 97 aa7.78□□□□□ -1.16
SS18-202ENST00000269138 BCE1O60756 84 aa7.77□□□□□ -1.17
SS18-202ENST00000269138 NDUFC2O95298 119 aa7.77□□□□□ -1.17
SS18-202ENST00000269138 SPATA45Q537H7 98 aa7.77□□□□□ -1.17
SS18-202ENST00000269138 VAMP8Q9BV40 100 aa7.77□□□□□ -1.17
SS18-202ENST00000269138 MYCBP2O75592 4640 aa7.76□□□□□ -1.17
SS18-202ENST00000269138 TRBV10-3A0A0K0K1G6 114 aa7.76□□□□□ -1.17
SS18-202ENST00000269138 COX8AP10176 69 aa7.76□□□□□ -1.17
SS18-202ENST00000269138 C14orf144Q96I85 54 aa7.76□□□□□ -1.17
SS18-202ENST00000269138 TMEM126AQ9H061 195 aa7.76□□□□□ -1.17
SS18-202ENST00000269138 SPANXB1Q9NS25 103 aaPredicted RBP7.76□□□□□ -1.17
SS18-202ENST00000269138 TRBV10-2A0A0K0K1G8 114 aa7.75□□□□□ -1.17
SS18-202ENST00000269138 REG3GQ6UW15 175 aa7.75□□□□□ -1.17
SS18-202ENST00000269138 MUSTN1Q8IVN3 82 aa7.74□□□□□ -1.17
SS18-202ENST00000269138 ZNF861PO60384 105 aa7.73□□□□□ -1.17
SS18-202ENST00000269138 DDTP30046 118 aa7.73□□□□□ -1.17
SS18-202ENST00000269138 IFITM1P13164 125 aa7.73□□□□□ -1.17
SS18-202ENST00000269138 Q6ZVH6 145 aa7.73□□□□□ -1.17
SS18-202ENST00000269138 FAM19A1Q7Z5A9 133 aa7.73□□□□□ -1.17
SS18-202ENST00000269138 KRTAP13-1Q8IUC0 172 aa7.73□□□□□ -1.17
SS18-202ENST00000269138 DIRC1Q969H9 104 aa7.73□□□□□ -1.17
SS18-202ENST00000269138 KCNQ1DNQ9H478 68 aa7.73□□□□□ -1.17
SS18-202ENST00000269138 LRP1Q07954 4544 aaKnown RBP7.72□□□□□ -1.17
SS18-202ENST00000269138 KRTAP29-1A8MX34 341 aaPredicted RBP7.72□□□□□ -1.17
SS18-202ENST00000269138 H0Y9J4 135 aa7.72□□□□□ -1.17
SS18-202ENST00000269138 PRYO14603 147 aa7.72□□□□□ -1.17
SS18-202ENST00000269138 DLEU1O43261 78 aa7.72□□□□□ -1.17
SS18-202ENST00000269138 IGLV6-57P01721 117 aa7.72□□□□□ -1.17
SS18-202ENST00000269138 UBE2AP49459 152 aa7.72□□□□□ -1.17
SS18-202ENST00000269138 PRLHP81277 87 aa7.72□□□□□ -1.17
SS18-202ENST00000269138 S100A7L2Q5SY68 101 aa7.72□□□□□ -1.17
SS18-202ENST00000269138 RPL28P46779 137 aaKnown RBP7.71□□□□□ -1.18
SS18-202ENST00000269138 OXTP01178 125 aa7.7□□□□□ -1.18
SS18-202ENST00000269138 SPRR1AP35321 89 aa7.7□□□□□ -1.18
SS18-202ENST00000269138 LINC00337Q8N6G1 96 aa7.7□□□□□ -1.18
SS18-202ENST00000269138 FAT3Q8TDW7 4589 aa7.7□□□□□ -1.18
SS18-202ENST00000269138 KRTAP4-16G5E9R7 235 aaPredicted RBP7.69□□□□□ -1.18
SS18-202ENST00000269138 SLC25A34Q6PIV7 304 aa7.69□□□□□ -1.18
SS18-202ENST00000269138 OR13C6PQ8NH95 151 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms