RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 STAB2Q8WWQ8 2551 aa13.76□□□□□ -0.21
LYSMD2-201ENST00000267838 PFN2P35080 140 aa13.76□□□□□ -0.21
LYSMD2-201ENST00000267838 BAALC-AS2P0C853 105 aa13.75□□□□□ -0.21
LYSMD2-201ENST00000267838 APLNQ9ULZ1 77 aa13.75□□□□□ -0.21
LYSMD2-201ENST00000267838 IGKV2D-24A0A075B6R9 120 aa13.73□□□□□ -0.21
LYSMD2-201ENST00000267838 INAFM2P0DMQ5 153 aa13.73□□□□□ -0.21
LYSMD2-201ENST00000267838 C6orf223Q8N319 242 aa13.73□□□□□ -0.21
LYSMD2-201ENST00000267838 LINC00337Q8N6G1 96 aa13.73□□□□□ -0.21
LYSMD2-201ENST00000267838 IGKV2-28A0A075B6P5 120 aa13.72□□□□□ -0.21
LYSMD2-201ENST00000267838 TRBV7-7A0A0K0K1E9 115 aa13.72□□□□□ -0.21
LYSMD2-201ENST00000267838 H0YGX0 51 aa13.72□□□□□ -0.21
LYSMD2-201ENST00000267838 IGKV2D-28P01615 120 aa13.72□□□□□ -0.21
LYSMD2-201ENST00000267838 Q9HAA7 133 aa13.72□□□□□ -0.21
LYSMD2-201ENST00000267838 LINC00526Q96FQ7 95 aa13.71□□□□□ -0.22
LYSMD2-201ENST00000267838 FAM218AQ96MZ4 157 aa13.71□□□□□ -0.22
LYSMD2-201ENST00000267838 NUPR2A6NF83 97 aa13.7□□□□□ -0.22
LYSMD2-201ENST00000267838 COX17Q14061 63 aa13.69□□□□□ -0.22
LYSMD2-201ENST00000267838 IMUPQ9GZP8 106 aa13.69□□□□□ -0.22
LYSMD2-201ENST00000267838 DNAL4O96015 105 aa13.68□□□□□ -0.22
LYSMD2-201ENST00000267838 C10orf25Q5T742 122 aa13.68□□□□□ -0.22
LYSMD2-201ENST00000267838 UNQ6190/PRO20217Q6UXQ8 127 aa13.68□□□□□ -0.22
LYSMD2-201ENST00000267838 SMIM11BQ8TCY0 68 aa13.68□□□□□ -0.22
LYSMD2-201ENST00000267838 UBE2DNLQ8IWF7 75 aa13.67□□□□□ -0.22
LYSMD2-201ENST00000267838 C15orf56Q8N910 161 aa13.67□□□□□ -0.22
LYSMD2-201ENST00000267838 ZNF561-AS1K7EIQ3 104 aa13.66□□□□□ -0.22
LYSMD2-201ENST00000267838 HIGD2BQ4VC39 106 aa13.66□□□□□ -0.22
LYSMD2-201ENST00000267838 C9orf116Q5BN46 136 aaPredicted RBP13.66□□□□□ -0.22
LYSMD2-201ENST00000267838 LINC00643Q86TS7 51 aa13.66□□□□□ -0.22
LYSMD2-201ENST00000267838 RMI2Q96E14 147 aa13.64□□□□□ -0.23
LYSMD2-201ENST00000267838 C22orf24Q9Y442 160 aa13.64□□□□□ -0.23
LYSMD2-201ENST00000267838 DYNC2H1Q8NCM8 4307 aaKnown RBP13.64□□□□□ -0.23
LYSMD2-201ENST00000267838 GVQW2A0A096LPI5 108 aaPredicted RBP13.63□□□□□ -0.23
LYSMD2-201ENST00000267838 SDIM1Q6ZPB5 146 aa13.63□□□□□ -0.23
LYSMD2-201ENST00000267838 C2orf48Q96LS8 159 aa13.61□□□□□ -0.23
LYSMD2-201ENST00000267838 CAMK2N2Q96S95 79 aa13.61□□□□□ -0.23
LYSMD2-201ENST00000267838 C6orf48Q9UBA6 75 aa13.61□□□□□ -0.23
LYSMD2-201ENST00000267838 A0A087WYN8 130 aa13.6□□□□□ -0.23
LYSMD2-201ENST00000267838 MUC7Q8TAX7 377 aa13.6□□□□□ -0.23
LYSMD2-201ENST00000267838 OR13C6PQ8NH95 151 aa13.59□□□□□ -0.23
LYSMD2-201ENST00000267838 FBN3Q75N90 2809 aa13.58□□□□□ -0.24
LYSMD2-201ENST00000267838 F8WDY8 70 aa13.57□□□□□ -0.24
LYSMD2-201ENST00000267838 SMCR5Q8TEV8 140 aa13.57□□□□□ -0.24
LYSMD2-201ENST00000267838 KRTAP1-5Q9BYS1 174 aa13.57□□□□□ -0.24
LYSMD2-201ENST00000267838 CASC10Q5T4H9 136 aa13.56□□□□□ -0.24
LYSMD2-201ENST00000267838 GAGE2AQ6NT46 116 aa13.56□□□□□ -0.24
LYSMD2-201ENST00000267838 Q6ZRU5 148 aa13.56□□□□□ -0.24
LYSMD2-201ENST00000267838 A0A1B0GX51 115 aa13.55□□□□□ -0.24
LYSMD2-201ENST00000267838 NDUFC2O95298 119 aa13.55□□□□□ -0.24
LYSMD2-201ENST00000267838 B5MCH6 92 aa13.55□□□□□ -0.24
LYSMD2-201ENST00000267838 LECT2O14960 151 aa13.55□□□□□ -0.24
LYSMD2-201ENST00000267838 OBSCN-AS1Q96MR7 158 aa13.55□□□□□ -0.24
LYSMD2-201ENST00000267838 CSMD3Q7Z407 3707 aa13.54□□□□□ -0.24
LYSMD2-201ENST00000267838 CCDC179H3BU77 68 aa13.54□□□□□ -0.24
LYSMD2-201ENST00000267838 DNAH1Q9P2D7 4330 aa13.54□□□□□ -0.24
LYSMD2-201ENST00000267838 USP17L23D6RBM5 183 aa13.53□□□□□ -0.24
LYSMD2-201ENST00000267838 SYCNQ0VAF6 134 aa13.52□□□□□ -0.25
LYSMD2-201ENST00000267838 ORMDL1Q9P0S3 153 aa13.52□□□□□ -0.25
LYSMD2-201ENST00000267838 DNAH7Q8WXX0 4024 aa13.51□□□□□ -0.25
LYSMD2-201ENST00000267838 FAM236AA0A1B0GUQ0 79 aa13.5□□□□□ -0.25
LYSMD2-201ENST00000267838 FAM236BA0A1B0GV22 79 aa13.5□□□□□ -0.25
LYSMD2-201ENST00000267838 LINC00167Q96N53 147 aa13.5□□□□□ -0.25
LYSMD2-201ENST00000267838 TGP01266 2768 aa13.5□□□□□ -0.25
LYSMD2-201ENST00000267838 TMEM126AQ9H061 195 aa13.48□□□□□ -0.25
LYSMD2-201ENST00000267838 LYSTQ99698 3801 aa13.48□□□□□ -0.25
LYSMD2-201ENST00000267838 PRR3P79522 188 aaKnown RBP13.48□□□□□ -0.25
LYSMD2-201ENST00000267838 SS18L2Q9UHA2 77 aa13.48□□□□□ -0.25
LYSMD2-201ENST00000267838 PLECQ15149 4684 aaKnown RBP13.47□□□□□ -0.25
LYSMD2-201ENST00000267838 NDUFC2-KCTD14E9PQ53 114 aa13.47□□□□□ -0.25
LYSMD2-201ENST00000267838 Q8NDZ9 215 aa13.47□□□□□ -0.25
LYSMD2-201ENST00000267838 C14orf132Q9NPU4 83 aa13.47□□□□□ -0.25
LYSMD2-201ENST00000267838 NBDYA0A0U1RRE5 68 aa13.46□□□□□ -0.25
LYSMD2-201ENST00000267838 XAGE1AQ9HD64 81 aa13.45□□□□□ -0.26
LYSMD2-201ENST00000267838 SLPIP03973 132 aa13.45□□□□□ -0.26
LYSMD2-201ENST00000267838 PSCAO43653 123 aa13.44□□□□□ -0.26
LYSMD2-201ENST00000267838 STARD9Q9P2P6 4700 aa13.44□□□□□ -0.26
LYSMD2-201ENST00000267838 JMJD7-PLA2G4BH0Y9G9 81 aa13.43□□□□□ -0.26
LYSMD2-201ENST00000267838 NCR3O14931 201 aa13.43□□□□□ -0.26
LYSMD2-201ENST00000267838 Q6JHZ5 121 aa13.43□□□□□ -0.26
LYSMD2-201ENST00000267838 C9orf129Q5T035 196 aaKnown RBP13.42□□□□□ -0.26
LYSMD2-201ENST00000267838 Q6ZRP5 223 aa13.42□□□□□ -0.26
LYSMD2-201ENST00000267838 Q8N814 137 aa13.42□□□□□ -0.26
LYSMD2-201ENST00000267838 TMEM256-PLSCR3K7ERE1 68 aa13.41□□□□□ -0.26
LYSMD2-201ENST00000267838 TLX1NBP0CAT3 122 aa13.39□□□□□ -0.27
LYSMD2-201ENST00000267838 CCKP06307 115 aa13.38□□□□□ -0.27
LYSMD2-201ENST00000267838 S100A7L2Q5SY68 101 aa13.37□□□□□ -0.27
LYSMD2-201ENST00000267838 HIST1H4AP62805 103 aaKnown RBP13.37□□□□□ -0.27
LYSMD2-201ENST00000267838 RPL18AQ02543 176 aaKnown RBP13.37□□□□□ -0.27
LYSMD2-201ENST00000267838 LINC00846Q9NV44 126 aa13.37□□□□□ -0.27
LYSMD2-201ENST00000267838 ATOX1O00244 68 aa13.36□□□□□ -0.27
LYSMD2-201ENST00000267838 UQCRQO14949 82 aa13.36□□□□□ -0.27
LYSMD2-201ENST00000267838 C3orf22Q8N5N4 141 aa13.36□□□□□ -0.27
LYSMD2-201ENST00000267838 VPREB1P12018 145 aa13.35□□□□□ -0.27
LYSMD2-201ENST00000267838 TENM2Q9NT68 2774 aa13.35□□□□□ -0.27
LYSMD2-201ENST00000267838 WWC2-AS2Q96NR7 200 aa13.34□□□□□ -0.27
LYSMD2-201ENST00000267838 M0R2N4 97 aa13.33□□□□□ -0.28
LYSMD2-201ENST00000267838 C14orf177Q52M58 125 aa13.33□□□□□ -0.28
LYSMD2-201ENST00000267838 IGLV6-57P01721 117 aa13.32□□□□□ -0.28
LYSMD2-201ENST00000267838 C6orf99Q4VX62 202 aa13.32□□□□□ -0.28
LYSMD2-201ENST00000267838 ATP5EP2Q5VTU8 51 aa13.32□□□□□ -0.28
LYSMD2-201ENST00000267838 Q6ZRN7 208 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms