RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 CD164L2Q6UWJ8 174 aa11.43□□□□□ -0.58
SQLE-201ENST00000265896 SPAG11BQ08648 103 aa11.43□□□□□ -0.58
SQLE-201ENST00000265896 HIGD2BQ4VC39 106 aa11.43□□□□□ -0.58
SQLE-201ENST00000265896 SVIPQ8NHG7 77 aa11.43□□□□□ -0.58
SQLE-201ENST00000265896 A0A1B0GUV1 79 aa11.42□□□□□ -0.58
SQLE-201ENST00000265896 CYSRT1A8MQ03 144 aa11.42□□□□□ -0.58
SQLE-201ENST00000265896 TMEM126AQ9H061 195 aa11.42□□□□□ -0.58
SQLE-201ENST00000265896 LY6G6DO95868 133 aa11.41□□□□□ -0.58
SQLE-201ENST00000265896 NBEAL1Q6ZS30 2694 aa11.41□□□□□ -0.58
SQLE-201ENST00000265896 FAM110AQ9BQ89 295 aa11.41□□□□□ -0.58
SQLE-201ENST00000265896 C16orf95Q9H693 158 aa11.41□□□□□ -0.58
SQLE-201ENST00000265896 SCXQ7RTU7 201 aa11.4□□□□□ -0.58
SQLE-201ENST00000265896 OBSCN-AS1Q96MR7 158 aa11.4□□□□□ -0.58
SQLE-201ENST00000265896 CCKP06307 115 aa11.4□□□□□ -0.58
SQLE-201ENST00000265896 ANK2Q01484 3957 aa11.4□□□□□ -0.59
SQLE-201ENST00000265896 DSCR8Q96T75 97 aa11.4□□□□□ -0.59
SQLE-201ENST00000265896 ATOX1O00244 68 aa11.38□□□□□ -0.59
SQLE-201ENST00000265896 HAMPP81172 84 aa11.38□□□□□ -0.59
SQLE-201ENST00000265896 Q6ZQY7 126 aa11.38□□□□□ -0.59
SQLE-201ENST00000265896 COL6A5A8TX70 2615 aa11.38□□□□□ -0.59
SQLE-201ENST00000265896 INAFM1C9JVW0 142 aa11.37□□□□□ -0.59
SQLE-201ENST00000265896 Q6JHZ5 121 aa11.37□□□□□ -0.59
SQLE-201ENST00000265896 RETNQ9HD89 108 aa11.37□□□□□ -0.59
SQLE-201ENST00000265896 LINC00612Q8N6U2 182 aa11.36□□□□□ -0.59
SQLE-201ENST00000265896 CSMD3Q7Z407 3707 aa11.35□□□□□ -0.59
SQLE-201ENST00000265896 TRBV10-3A0A0K0K1G6 114 aa11.35□□□□□ -0.59
SQLE-201ENST00000265896 TMEM256-PLSCR3K7ERE1 68 aa11.35□□□□□ -0.59
SQLE-201ENST00000265896 GHRHP01286 108 aa11.35□□□□□ -0.59
SQLE-201ENST00000265896 LINC00575Q6W349 94 aa11.33□□□□□ -0.6
SQLE-201ENST00000265896 RBM3P98179 157 aaKnown RBP11.31□□□□□ -0.6
SQLE-201ENST00000265896 SERP2Q8N6R1 65 aa11.31□□□□□ -0.6
SQLE-201ENST00000265896 UPK3BQ9BT76 320 aa11.31□□□□□ -0.6
SQLE-201ENST00000265896 WFDC10BQ8IUB3 73 aa11.31□□□□□ -0.6
SQLE-201ENST00000265896 C20orf197Q8N268 126 aa11.31□□□□□ -0.6
SQLE-201ENST00000265896 JMJD7-PLA2G4BH0Y9G9 81 aa11.3□□□□□ -0.6
SQLE-201ENST00000265896 UBL5Q9BZL1 73 aa11.3□□□□□ -0.6
SQLE-201ENST00000265896 C6orf48Q9UBA6 75 aa11.3□□□□□ -0.6
SQLE-201ENST00000265896 LYRM9A8MSI8 78 aa11.29□□□□□ -0.6
SQLE-201ENST00000265896 CRYGAP11844 174 aa11.29□□□□□ -0.6
SQLE-201ENST00000265896 FAM19A5Q7Z5A7 132 aaPredicted RBP11.29□□□□□ -0.6
SQLE-201ENST00000265896 Q8NAQ8 132 aa11.29□□□□□ -0.6
SQLE-201ENST00000265896 NDUFC2O95298 119 aa11.27□□□□□ -0.61
SQLE-201ENST00000265896 IGHV4-30-4P0DP06 118 aa11.27□□□□□ -0.61
SQLE-201ENST00000265896 COX17Q14061 63 aa11.26□□□□□ -0.61
SQLE-201ENST00000265896 OXTP01178 125 aa11.26□□□□□ -0.61
SQLE-201ENST00000265896 Q8N9L7 120 aa11.26□□□□□ -0.61
SQLE-201ENST00000265896 LINC00167Q96N53 147 aa11.26□□□□□ -0.61
SQLE-201ENST00000265896 SMIM9A6NGZ8 99 aa11.25□□□□□ -0.61
SQLE-201ENST00000265896 OXLD1Q5BKU9 147 aa11.25□□□□□ -0.61
SQLE-201ENST00000265896 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.25□□□□□ -0.61
SQLE-201ENST00000265896 TRAV10A0A0B4J240 114 aa11.25□□□□□ -0.61
SQLE-201ENST00000265896 SPART-AS1P0CW21 52 aa11.25□□□□□ -0.61
SQLE-201ENST00000265896 Q6ZQT0 140 aa11.25□□□□□ -0.61
SQLE-201ENST00000265896 SNURFQ9Y675 71 aa11.25□□□□□ -0.61
SQLE-201ENST00000265896 KMT2BQ9UMN6 2715 aaPredicted RBP11.25□□□□□ -0.61
SQLE-201ENST00000265896 C9orf66Q5T8R8 295 aa11.24□□□□□ -0.61
SQLE-201ENST00000265896 DEFB105AQ8NG35 78 aa11.24□□□□□ -0.61
SQLE-201ENST00000265896 CAMK2N2Q96S95 79 aa11.24□□□□□ -0.61
SQLE-201ENST00000265896 APOC4P55056 127 aa11.23□□□□□ -0.61
SQLE-201ENST00000265896 ZNF561-AS1K7EIQ3 104 aa11.23□□□□□ -0.61
SQLE-201ENST00000265896 LYPD5Q6UWN5 251 aa11.23□□□□□ -0.61
SQLE-201ENST00000265896 LELP1Q5T871 98 aa11.22□□□□□ -0.61
SQLE-201ENST00000265896 Q6ZVQ6 151 aa11.22□□□□□ -0.61
SQLE-201ENST00000265896 J3KT08 172 aa11.22□□□□□ -0.61
SQLE-201ENST00000265896 LINC01547P58512 204 aaPredicted RBP11.22□□□□□ -0.61
SQLE-201ENST00000265896 IGLV6-57P01721 117 aa11.21□□□□□ -0.62
SQLE-201ENST00000265896 Q6ZRU5 148 aa11.21□□□□□ -0.62
SQLE-201ENST00000265896 ZNF73O43830 326 aaPredicted RBP11.2□□□□□ -0.62
SQLE-201ENST00000265896 Q6ZTC4 211 aa11.2□□□□□ -0.62
SQLE-201ENST00000265896 DIRC1Q969H9 104 aa11.2□□□□□ -0.62
SQLE-201ENST00000265896 DPH3Q96FX2 82 aa11.19□□□□□ -0.62
SQLE-201ENST00000265896 SRRM2Q9UQ35 2752 aaKnown RBP11.19□□□□□ -0.62
SQLE-201ENST00000265896 J3QKU1 62 aa11.18□□□□□ -0.62
SQLE-201ENST00000265896 KPRPQ5T749 579 aaPredicted RBP11.17□□□□□ -0.62
SQLE-201ENST00000265896 A0A0J9YWU9 116 aa11.17□□□□□ -0.62
SQLE-201ENST00000265896 IGKV2D-24A0A075B6R9 120 aa11.16□□□□□ -0.62
SQLE-201ENST00000265896 MUC7Q8TAX7 377 aa11.16□□□□□ -0.62
SQLE-201ENST00000265896 C3orf84H3BNL1 204 aa11.16□□□□□ -0.62
SQLE-201ENST00000265896 PRR34Q9NV39 138 aa11.16□□□□□ -0.62
SQLE-201ENST00000265896 TENM2Q9NT68 2774 aa11.16□□□□□ -0.62
SQLE-201ENST00000265896 MIFP14174 115 aa11.16□□□□□ -0.62
SQLE-201ENST00000265896 COX7BP24311 80 aa11.16□□□□□ -0.62
SQLE-201ENST00000265896 C4orf26Q17RF5 130 aa11.15□□□□□ -0.62
SQLE-201ENST00000265896 RMI2Q96E14 147 aa11.15□□□□□ -0.62
SQLE-201ENST00000265896 PRB2P02812 416 aaPredicted RBP11.13□□□□□ -0.63
SQLE-201ENST00000265896 RPL37AP8A6NKH3 93 aa11.13□□□□□ -0.63
SQLE-201ENST00000265896 Q6ZRP5 223 aa11.13□□□□□ -0.63
SQLE-201ENST00000265896 TM2D3Q9BRN9 247 aa11.12□□□□□ -0.63
SQLE-201ENST00000265896 MGAM2Q2M2H8 2515 aa11.12□□□□□ -0.63
SQLE-201ENST00000265896 ESRGQ1W209 222 aa11.11□□□□□ -0.63
SQLE-201ENST00000265896 VPREB1P12018 145 aa11.11□□□□□ -0.63
SQLE-201ENST00000265896 TMEM258P61165 79 aa11.11□□□□□ -0.63
SQLE-201ENST00000265896 LYSTQ99698 3801 aa11.1□□□□□ -0.63
SQLE-201ENST00000265896 HRCT1Q6UXD1 115 aa11.1□□□□□ -0.63
SQLE-201ENST00000265896 C15orf56Q8N910 161 aa11.1□□□□□ -0.63
SQLE-201ENST00000265896 BPY2O14599 106 aa11.09□□□□□ -0.63
SQLE-201ENST00000265896 FAM168BA1KXE4 195 aa11.08□□□□□ -0.64
SQLE-201ENST00000265896 LOC110117498A0A087WWA1 95 aa11.07□□□□□ -0.64
SQLE-201ENST00000265896 ATP5EP2Q5VTU8 51 aa11.07□□□□□ -0.64
SQLE-201ENST00000265896 SERTAD4-AS1Q5TG53 156 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms