RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 PPDPFQ9H3Y8 114 aa8.97□□□□□ -0.97
SSBP1-201ENST00000265304 XAGE1AQ9HD64 81 aa8.97□□□□□ -0.97
SSBP1-201ENST00000265304 FAT1Q14517 4588 aa8.97□□□□□ -0.97
SSBP1-201ENST00000265304 LOC105371267A0A1B0GV96 52 aa8.96□□□□□ -0.98
SSBP1-201ENST00000265304 COX8AP10176 69 aa8.96□□□□□ -0.98
SSBP1-201ENST00000265304 LINC00158P58513 81 aa8.96□□□□□ -0.98
SSBP1-201ENST00000265304 MEIG1Q5JSS6 88 aa8.96□□□□□ -0.98
SSBP1-201ENST00000265304 ADAMTSL4-AS1Q5T5F5 129 aa8.96□□□□□ -0.98
SSBP1-201ENST00000265304 MIR7-3HGQ8N6C7 128 aa8.96□□□□□ -0.98
SSBP1-201ENST00000265304 TP73-AS1Q9UF72 201 aa8.96□□□□□ -0.98
SSBP1-201ENST00000265304 VAMP8Q9BV40 100 aa8.95□□□□□ -0.98
SSBP1-201ENST00000265304 VPS13BQ7Z7G8 4022 aa8.95□□□□□ -0.98
SSBP1-201ENST00000265304 FAM168BA1KXE4 195 aa8.94□□□□□ -0.98
SSBP1-201ENST00000265304 Q6ZVH6 145 aa8.94□□□□□ -0.98
SSBP1-201ENST00000265304 VPREB1P12018 145 aa8.93□□□□□ -0.98
SSBP1-201ENST00000265304 SERTAD4-AS1Q5TG53 156 aa8.93□□□□□ -0.98
SSBP1-201ENST00000265304 DPH3Q96FX2 82 aa8.93□□□□□ -0.98
SSBP1-201ENST00000265304 KRTAP17-1Q9BYP8 105 aa8.93□□□□□ -0.98
SSBP1-201ENST00000265304 SRRM2Q9UQ35 2752 aaKnown RBP8.92□□□□□ -0.98
SSBP1-201ENST00000265304 SPATA45Q537H7 98 aa8.92□□□□□ -0.98
SSBP1-201ENST00000265304 SPANXDQ9BXN6 97 aa8.92□□□□□ -0.98
SSBP1-201ENST00000265304 SPANXCQ9NY87 97 aa8.92□□□□□ -0.98
SSBP1-201ENST00000265304 A0A0U1RRA0 63 aa8.91□□□□□ -0.98
SSBP1-201ENST00000265304 Q8NDZ9 215 aa8.91□□□□□ -0.98
SSBP1-201ENST00000265304 PAM16Q9Y3D7 125 aa8.91□□□□□ -0.98
SSBP1-201ENST00000265304 HERC2O95714 4834 aa8.91□□□□□ -0.98
SSBP1-201ENST00000265304 TMEM238C9JI98 176 aa8.9□□□□□ -0.98
SSBP1-201ENST00000265304 EIF4EBP3O60516 100 aaPredicted RBP8.9□□□□□ -0.98
SSBP1-201ENST00000265304 NDUFC2O95298 119 aa8.9□□□□□ -0.98
SSBP1-201ENST00000265304 SMIM6P0DI80 62 aa8.9□□□□□ -0.98
SSBP1-201ENST00000265304 HAMPP81172 84 aa8.9□□□□□ -0.98
SSBP1-201ENST00000265304 RPL24P83731 157 aaKnown RBP8.9□□□□□ -0.98
SSBP1-201ENST00000265304 SOSTDC1Q6X4U4 206 aa8.9□□□□□ -0.98
SSBP1-201ENST00000265304 Q8N1X5 172 aa8.9□□□□□ -0.98
SSBP1-201ENST00000265304 SPANXB1Q9NS25 103 aaPredicted RBP8.9□□□□□ -0.98
SSBP1-201ENST00000265304 C22orf24Q9Y442 160 aa8.9□□□□□ -0.98
SSBP1-201ENST00000265304 IFITM1P13164 125 aa8.89□□□□□ -0.99
SSBP1-201ENST00000265304 KRTAP10-4P60372 401 aaPredicted RBP8.89□□□□□ -0.99
SSBP1-201ENST00000265304 SCGB1D4Q6XE38 83 aa8.89□□□□□ -0.99
SSBP1-201ENST00000265304 LINC00528Q8N1L1 170 aa8.89□□□□□ -0.99
SSBP1-201ENST00000265304 DAND5Q8N907 189 aa8.89□□□□□ -0.99
SSBP1-201ENST00000265304 LINC00308Q8TCZ7 52 aa8.89□□□□□ -0.99
SSBP1-201ENST00000265304 HIGD1BQ9P298 99 aa8.89□□□□□ -0.99
SSBP1-201ENST00000265304 LBHQ53QV2 105 aaPredicted RBP8.88□□□□□ -0.99
SSBP1-201ENST00000265304 FAM19A5Q7Z5A7 132 aaPredicted RBP8.88□□□□□ -0.99
SSBP1-201ENST00000265304 TRBV10-2A0A0K0K1G8 114 aa8.87□□□□□ -0.99
SSBP1-201ENST00000265304 M0QXV9 152 aa8.87□□□□□ -0.99
SSBP1-201ENST00000265304 SLC25A34Q6PIV7 304 aa8.87□□□□□ -0.99
SSBP1-201ENST00000265304 MRPL55Q7Z7F7 128 aaKnown RBP8.87□□□□□ -0.99
SSBP1-201ENST00000265304 C14orf144Q96I85 54 aa8.87□□□□□ -0.99
SSBP1-201ENST00000265304 SMR3BP02814 79 aaPredicted RBP8.86□□□□□ -0.99
SSBP1-201ENST00000265304 PHF5AQ7RTV0 110 aaKnown RBP8.86□□□□□ -0.99
SSBP1-201ENST00000265304 S100A12P80511 92 aa8.85□□□□□ -0.99
SSBP1-201ENST00000265304 C2orf91Q6ZV80 131 aa8.85□□□□□ -0.99
SSBP1-201ENST00000265304 KRTAP11-1Q8IUC1 163 aa8.85□□□□□ -0.99
SSBP1-201ENST00000265304 C7orf33Q8WU49 177 aa8.85□□□□□ -0.99
SSBP1-201ENST00000265304 COPS9Q8WXC6 57 aa8.85□□□□□ -0.99
SSBP1-201ENST00000265304 LINC00167Q96N53 147 aa8.85□□□□□ -0.99
SSBP1-201ENST00000265304 M0R378 163 aa8.84□□□□□ -0.99
SSBP1-201ENST00000265304 IGLV1-50A0A075B6I6 118 aa8.83□□□□□ -1
SSBP1-201ENST00000265304 FAM229AH3BQW9 127 aa8.83□□□□□ -1
SSBP1-201ENST00000265304 NKAPP1Q8N9T2 125 aa8.83□□□□□ -1
SSBP1-201ENST00000265304 MIEN1Q9BRT3 115 aa8.83□□□□□ -1
SSBP1-201ENST00000265304 PRR3P79522 188 aaKnown RBP8.82□□□□□ -1
SSBP1-201ENST00000265304 IGKV2-28A0A075B6P5 120 aa8.81□□□□□ -1
SSBP1-201ENST00000265304 IGKV2D-28P01615 120 aa8.81□□□□□ -1
SSBP1-201ENST00000265304 MUSTN1Q8IVN3 82 aa8.81□□□□□ -1
SSBP1-201ENST00000265304 LINC00518Q8N0U6 118 aa8.81□□□□□ -1
SSBP1-201ENST00000265304 PSORS1C2Q9UIG4 136 aa8.81□□□□□ -1
SSBP1-201ENST00000265304 IGLV6-57P01721 117 aa8.8□□□□□ -1
SSBP1-201ENST00000265304 PLA2G1BP04054 148 aaKnown RBP8.8□□□□□ -1
SSBP1-201ENST00000265304 TAL2Q16559 108 aa8.8□□□□□ -1
SSBP1-201ENST00000265304 UQCR10Q9UDW1 63 aa8.8□□□□□ -1
SSBP1-201ENST00000265304 SRSF9Q13242 221 aaKnown RBP eCLIP8.79□□□□□ -1
SSBP1-201ENST00000265304 Q5VSD8 79 aa8.79□□□□□ -1
SSBP1-201ENST00000265304 KCNQ1DNQ9H478 68 aa8.79□□□□□ -1
SSBP1-201ENST00000265304 RPL37AP61513 92 aaKnown RBP8.78□□□□□ -1
SSBP1-201ENST00000265304 NPC2P61916 151 aa8.78□□□□□ -1
SSBP1-201ENST00000265304 FLG2Q5D862 2391 aaPredicted RBP8.77□□□□□ -1.01
SSBP1-201ENST00000265304 SPRR1AP35321 89 aa8.77□□□□□ -1.01
SSBP1-201ENST00000265304 KRTAP4-5Q9BYR2 181 aa8.77□□□□□ -1.01
SSBP1-201ENST00000265304 PKHD1L1Q86WI1 4243 aa8.76□□□□□ -1.01
SSBP1-201ENST00000265304 TRBV10-3A0A0K0K1G6 114 aa8.76□□□□□ -1.01
SSBP1-201ENST00000265304 KRTAP4-16G5E9R7 235 aaPredicted RBP8.76□□□□□ -1.01
SSBP1-201ENST00000265304 UBE2BP63146 152 aa8.76□□□□□ -1.01
SSBP1-201ENST00000265304 LINC00337Q8N6G1 96 aa8.76□□□□□ -1.01
SSBP1-201ENST00000265304 HIST1H4GQ99525 98 aa8.76□□□□□ -1.01
SSBP1-201ENST00000265304 GAGE10A6NGK3 116 aa8.75□□□□□ -1.01
SSBP1-201ENST00000265304 RPL37AP8A6NKH3 93 aa8.75□□□□□ -1.01
SSBP1-201ENST00000265304 C12orf57Q99622 126 aa8.75□□□□□ -1.01
SSBP1-201ENST00000265304 A4D1N5 150 aa8.74□□□□□ -1.01
SSBP1-201ENST00000265304 PRYO14603 147 aa8.74□□□□□ -1.01
SSBP1-201ENST00000265304 NCR3O14931 201 aa8.74□□□□□ -1.01
SSBP1-201ENST00000265304 DDTP30046 118 aa8.74□□□□□ -1.01
SSBP1-201ENST00000265304 KRTAP13-1Q8IUC0 172 aa8.74□□□□□ -1.01
SSBP1-201ENST00000265304 TMEM126AQ9H061 195 aa8.74□□□□□ -1.01
SSBP1-201ENST00000265304 H0Y9J4 135 aa8.73□□□□□ -1.01
SSBP1-201ENST00000265304 BCE1O60756 84 aa8.73□□□□□ -1.01
SSBP1-201ENST00000265304 IGLV7-43P04211 117 aa8.73□□□□□ -1.01
SSBP1-201ENST00000265304 REG3GQ6UW15 175 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms