RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 TIMM17BO60830 172 aa6.27□□□□□ -1.41
SNRNP40-201ENST00000263694 GAGE2BQ13066 116 aa6.27□□□□□ -1.41
SNRNP40-201ENST00000263694 RNF151Q2KHN1 245 aa6.27□□□□□ -1.41
SNRNP40-201ENST00000263694 MUSTN1Q8IVN3 82 aa6.27□□□□□ -1.41
SNRNP40-201ENST00000263694 C9orf163Q8N9P6 203 aa6.27□□□□□ -1.41
SNRNP40-201ENST00000263694 XAGE1AQ9HD64 81 aa6.27□□□□□ -1.41
SNRNP40-201ENST00000263694 NDUFC2-KCTD14E9PQ53 114 aa6.26□□□□□ -1.41
SNRNP40-201ENST00000263694 COX17Q14061 63 aa6.26□□□□□ -1.41
SNRNP40-201ENST00000263694 SPANXDQ9BXN6 97 aa6.26□□□□□ -1.41
SNRNP40-201ENST00000263694 SND1-IT1Q9HBX3 110 aa6.26□□□□□ -1.41
SNRNP40-201ENST00000263694 SPANXB1Q9NS25 103 aaPredicted RBP6.26□□□□□ -1.41
SNRNP40-201ENST00000263694 SPANXCQ9NY87 97 aa6.26□□□□□ -1.41
SNRNP40-201ENST00000263694 IGLV5-52A0A0A0MRZ9 124 aa6.25□□□□□ -1.41
SNRNP40-201ENST00000263694 LOC107984640A0A0U1RRK4 108 aa6.25□□□□□ -1.41
SNRNP40-201ENST00000263694 LINC00308Q8TCZ7 52 aa6.25□□□□□ -1.41
SNRNP40-201ENST00000263694 A0A096LNI7 61 aa6.24□□□□□ -1.41
SNRNP40-201ENST00000263694 IGKV2-24A0A0C4DH68 120 aa6.24□□□□□ -1.41
SNRNP40-201ENST00000263694 LINC00587B1AMM8 73 aa6.24□□□□□ -1.41
SNRNP40-201ENST00000263694 CHTF8P0CG12 524 aa6.24□□□□□ -1.41
SNRNP40-201ENST00000263694 GCSHP23434 173 aa6.24□□□□□ -1.41
SNRNP40-201ENST00000263694 HINT1P49773 126 aaPredicted RBP6.24□□□□□ -1.41
SNRNP40-201ENST00000263694 SDIM1Q6ZPB5 146 aa6.24□□□□□ -1.41
SNRNP40-201ENST00000263694 Q8NDZ9 215 aa6.24□□□□□ -1.41
SNRNP40-201ENST00000263694 RYR3Q15413 4870 aa6.24□□□□□ -1.41
SNRNP40-201ENST00000263694 PANO1I0J062 215 aa6.23□□□□□ -1.41
SNRNP40-201ENST00000263694 TLX1NBP0CAT3 122 aa6.23□□□□□ -1.41
SNRNP40-201ENST00000263694 FXYD2P54710 66 aa6.23□□□□□ -1.41
SNRNP40-201ENST00000263694 PRR3P79522 188 aaKnown RBP6.23□□□□□ -1.41
SNRNP40-201ENST00000263694 HSD52Q0P140 79 aa6.23□□□□□ -1.41
SNRNP40-201ENST00000263694 C9orf129Q5T035 196 aaKnown RBP6.23□□□□□ -1.41
SNRNP40-201ENST00000263694 LINC00336Q6ZUF6 198 aa6.23□□□□□ -1.41
SNRNP40-201ENST00000263694 CEND1Q8N111 149 aa6.23□□□□□ -1.41
SNRNP40-201ENST00000263694 FAM168BA1KXE4 195 aa6.23□□□□□ -1.41
SNRNP40-201ENST00000263694 A0A1B0GVY2 172 aa6.22□□□□□ -1.41
SNRNP40-201ENST00000263694 A4D1N5 150 aa6.22□□□□□ -1.41
SNRNP40-201ENST00000263694 PTTG1IPP53801 180 aa6.22□□□□□ -1.41
SNRNP40-201ENST00000263694 TAL2Q16559 108 aa6.22□□□□□ -1.41
SNRNP40-201ENST00000263694 DNAH5Q8TE73 4624 aa6.22□□□□□ -1.41
SNRNP40-201ENST00000263694 IFITM1P13164 125 aa6.21□□□□□ -1.42
SNRNP40-201ENST00000263694 BATFQ16520 125 aa6.21□□□□□ -1.42
SNRNP40-201ENST00000263694 BVES-AS1Q5T3Y7 98 aa6.21□□□□□ -1.42
SNRNP40-201ENST00000263694 Q6ZVH6 145 aa6.21□□□□□ -1.42
SNRNP40-201ENST00000263694 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.21□□□□□ -1.42
SNRNP40-201ENST00000263694 C16orf90A8MZG2 172 aa6.2□□□□□ -1.42
SNRNP40-201ENST00000263694 KRTAP10-1P60331 282 aa6.2□□□□□ -1.42
SNRNP40-201ENST00000263694 SERTAD4-AS1Q5TG53 156 aa6.2□□□□□ -1.42
SNRNP40-201ENST00000263694 KRTAP7-1Q8IUC3 87 aa6.2□□□□□ -1.42
SNRNP40-201ENST00000263694 KRTAP4-2Q9BYR5 136 aa6.2□□□□□ -1.42
SNRNP40-201ENST00000263694 LOC107984156A0A0G2JMH3 177 aa6.19□□□□□ -1.42
SNRNP40-201ENST00000263694 A0A1W2PNN7 141 aa6.19□□□□□ -1.42
SNRNP40-201ENST00000263694 ARL17AQ8IVW1 177 aa6.19□□□□□ -1.42
SNRNP40-201ENST00000263694 IGKV2-28A0A075B6P5 120 aa6.18□□□□□ -1.42
SNRNP40-201ENST00000263694 NCR3O14931 201 aa6.18□□□□□ -1.42
SNRNP40-201ENST00000263694 IGKV2D-28P01615 120 aa6.18□□□□□ -1.42
SNRNP40-201ENST00000263694 RPL24P83731 157 aaKnown RBP6.18□□□□□ -1.42
SNRNP40-201ENST00000263694 FAM19A5Q7Z5A7 132 aaPredicted RBP6.18□□□□□ -1.42
SNRNP40-201ENST00000263694 DPH3Q96FX2 82 aa6.18□□□□□ -1.42
SNRNP40-201ENST00000263694 FAM30AQ9NZY2 134 aa6.18□□□□□ -1.42
SNRNP40-201ENST00000263694 K7ERJ3 54 aa6.18□□□□□ -1.42
SNRNP40-201ENST00000263694 CFC1BP0CG36 223 aa6.18□□□□□ -1.42
SNRNP40-201ENST00000263694 CFC1P0CG37 223 aa6.18□□□□□ -1.42
SNRNP40-201ENST00000263694 VPREB1P12018 145 aa6.18□□□□□ -1.42
SNRNP40-201ENST00000263694 SNHG12Q9BXW3 62 aa6.18□□□□□ -1.42
SNRNP40-201ENST00000263694 NHP2Q9NX24 153 aaKnown RBP6.18□□□□□ -1.42
SNRNP40-201ENST00000263694 PKHD1P08F94 4074 aa6.17□□□□□ -1.42
SNRNP40-201ENST00000263694 M0R143 59 aa6.17□□□□□ -1.42
SNRNP40-201ENST00000263694 HAMPP81172 84 aa6.17□□□□□ -1.42
SNRNP40-201ENST00000263694 LINC00337Q8N6G1 96 aa6.17□□□□□ -1.42
SNRNP40-201ENST00000263694 GAGE10A6NGK3 116 aa6.16□□□□□ -1.42
SNRNP40-201ENST00000263694 SPACA4Q8TDM5 124 aa6.16□□□□□ -1.42
SNRNP40-201ENST00000263694 COPS9Q8WXC6 57 aa6.16□□□□□ -1.42
SNRNP40-201ENST00000263694 DNAH8Q96JB1 4490 aa6.14□□□□□ -1.43
SNRNP40-201ENST00000263694 A0A087WYN8 130 aa6.14□□□□□ -1.43
SNRNP40-201ENST00000263694 TMEM238LA0A1B0GVL6 79 aa6.14□□□□□ -1.43
SNRNP40-201ENST00000263694 NDUFC2O95298 119 aa6.14□□□□□ -1.43
SNRNP40-201ENST00000263694 OR13C6PQ8NH95 151 aa6.14□□□□□ -1.43
SNRNP40-201ENST00000263694 RAB37Q96AX2 223 aa6.14□□□□□ -1.43
SNRNP40-201ENST00000263694 PPDPFQ9H3Y8 114 aa6.14□□□□□ -1.43
SNRNP40-201ENST00000263694 PKIGQ9Y2B9 76 aa6.14□□□□□ -1.43
SNRNP40-201ENST00000263694 C22orf24Q9Y442 160 aa6.14□□□□□ -1.43
SNRNP40-201ENST00000263694 A6NDN8 102 aa6.14□□□□□ -1.43
SNRNP40-201ENST00000263694 H7C2G1 150 aa6.14□□□□□ -1.43
SNRNP40-201ENST00000263694 PHF5AQ7RTV0 110 aaKnown RBP6.14□□□□□ -1.43
SNRNP40-201ENST00000263694 NKAPP1Q8N9T2 125 aa6.14□□□□□ -1.43
SNRNP40-201ENST00000263694 C7orf33Q8WU49 177 aa6.14□□□□□ -1.43
SNRNP40-201ENST00000263694 LINC00474Q9P2X8 69 aa6.14□□□□□ -1.43
SNRNP40-201ENST00000263694 PLA2G2DQ9UNK4 145 aa6.14□□□□□ -1.43
SNRNP40-201ENST00000263694 A0A1B0GWB2 263 aa6.13□□□□□ -1.43
SNRNP40-201ENST00000263694 RPL37AP8A6NKH3 93 aa6.13□□□□□ -1.43
SNRNP40-201ENST00000263694 M0QXV9 152 aa6.13□□□□□ -1.43
SNRNP40-201ENST00000263694 IGLV5-37A0A075B6J1 123 aa6.12□□□□□ -1.43
SNRNP40-201ENST00000263694 A0A0B4J2C4 111 aa6.12□□□□□ -1.43
SNRNP40-201ENST00000263694 TRBV10-3A0A0K0K1G6 114 aa6.12□□□□□ -1.43
SNRNP40-201ENST00000263694 M0R378 163 aa6.12□□□□□ -1.43
SNRNP40-201ENST00000263694 RPL13AP40429 203 aaKnown RBP6.12□□□□□ -1.43
SNRNP40-201ENST00000263694 LINC00167Q96N53 147 aa6.12□□□□□ -1.43
SNRNP40-201ENST00000263694 NAA38Q9BRA0 125 aaKnown RBP6.12□□□□□ -1.43
SNRNP40-201ENST00000263694 S100A7L2Q5SY68 101 aa6.11□□□□□ -1.43
SNRNP40-201ENST00000263694 Q6ZSA8 131 aa6.11□□□□□ -1.43
SNRNP40-201ENST00000263694 MRPL55Q7Z7F7 128 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms