RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 ENHOQ6UWT2 76 aa11.21□□□□□ -0.61
ZNF541-201ENST00000263351 TMEM126AQ9H061 195 aa11.21□□□□□ -0.62
ZNF541-201ENST00000263351 KLK12Q9UKR0 248 aa11.2□□□□□ -0.62
ZNF541-201ENST00000263351 S100A7L2Q5SY68 101 aa11.2□□□□□ -0.62
ZNF541-201ENST00000263351 ATOX1O00244 68 aa11.18□□□□□ -0.62
ZNF541-201ENST00000263351 CYSRT1A8MQ03 144 aa11.18□□□□□ -0.62
ZNF541-201ENST00000263351 SPAG11BQ08648 103 aa11.18□□□□□ -0.62
ZNF541-201ENST00000263351 DAD1P61803 113 aa11.17□□□□□ -0.62
ZNF541-201ENST00000263351 LINC00167Q96N53 147 aa11.17□□□□□ -0.62
ZNF541-201ENST00000263351 DSCR8Q96T75 97 aa11.15□□□□□ -0.62
ZNF541-201ENST00000263351 UPK3BQ9BT76 320 aa11.15□□□□□ -0.62
ZNF541-201ENST00000263351 CRYGAP11844 174 aa11.15□□□□□ -0.63
ZNF541-201ENST00000263351 LINC00575Q6W349 94 aa11.14□□□□□ -0.63
ZNF541-201ENST00000263351 HIGD2BQ4VC39 106 aa11.14□□□□□ -0.63
ZNF541-201ENST00000263351 TMEM256-PLSCR3K7ERE1 68 aa11.13□□□□□ -0.63
ZNF541-201ENST00000263351 OXTP01178 125 aa11.13□□□□□ -0.63
ZNF541-201ENST00000263351 Q6ZQY7 126 aa11.13□□□□□ -0.63
ZNF541-201ENST00000263351 LAMTOR3Q9UHA4 124 aa11.13□□□□□ -0.63
ZNF541-201ENST00000263351 SERP2Q8N6R1 65 aa11.12□□□□□ -0.63
ZNF541-201ENST00000263351 TRBV10-3A0A0K0K1G6 114 aa11.12□□□□□ -0.63
ZNF541-201ENST00000263351 NDUFC2O95298 119 aa11.12□□□□□ -0.63
ZNF541-201ENST00000263351 SCXQ7RTU7 201 aa11.12□□□□□ -0.63
ZNF541-201ENST00000263351 GHRHP01286 108 aa11.11□□□□□ -0.63
ZNF541-201ENST00000263351 Q8NAQ8 132 aa11.11□□□□□ -0.63
ZNF541-201ENST00000263351 FBN1P35555 2871 aaKnown RBP11.1□□□□□ -0.63
ZNF541-201ENST00000263351 C6orf48Q9UBA6 75 aa11.1□□□□□ -0.63
ZNF541-201ENST00000263351 JMJD7-PLA2G4BH0Y9G9 81 aa11.09□□□□□ -0.63
ZNF541-201ENST00000263351 RETNQ9HD89 108 aa11.09□□□□□ -0.63
ZNF541-201ENST00000263351 LYRM9A8MSI8 78 aa11.09□□□□□ -0.63
ZNF541-201ENST00000263351 COX17Q14061 63 aa11.09□□□□□ -0.63
ZNF541-201ENST00000263351 Q6ZQT0 140 aa11.09□□□□□ -0.63
ZNF541-201ENST00000263351 FLNBO75369 2602 aaKnown RBP11.08□□□□□ -0.64
ZNF541-201ENST00000263351 INAFM1C9JVW0 142 aa11.08□□□□□ -0.64
ZNF541-201ENST00000263351 FAM19A5Q7Z5A7 132 aaPredicted RBP11.08□□□□□ -0.64
ZNF541-201ENST00000263351 MAST4O15021 2626 aa11.08□□□□□ -0.64
ZNF541-201ENST00000263351 BAHCC1Q9P281 2608 aa11.08□□□□□ -0.64
ZNF541-201ENST00000263351 NOTCH1P46531 2555 aa11.07□□□□□ -0.64
ZNF541-201ENST00000263351 HAMPP81172 84 aa11.07□□□□□ -0.64
ZNF541-201ENST00000263351 SMIM9A6NGZ8 99 aa11.07□□□□□ -0.64
ZNF541-201ENST00000263351 RBM3P98179 157 aaKnown RBP11.07□□□□□ -0.64
ZNF541-201ENST00000263351 WFDC10BQ8IUB3 73 aa11.07□□□□□ -0.64
ZNF541-201ENST00000263351 F8P00451 2351 aa11.07□□□□□ -0.64
ZNF541-201ENST00000263351 STAB1Q9NY15 2570 aa11.06□□□□□ -0.64
ZNF541-201ENST00000263351 IGLV6-57P01721 117 aa11.05□□□□□ -0.64
ZNF541-201ENST00000263351 C20orf197Q8N268 126 aa11.05□□□□□ -0.64
ZNF541-201ENST00000263351 TRAV10A0A0B4J240 114 aa11.04□□□□□ -0.64
ZNF541-201ENST00000263351 UBL5Q9BZL1 73 aa11.04□□□□□ -0.64
ZNF541-201ENST00000263351 LELP1Q5T871 98 aa11.02□□□□□ -0.65
ZNF541-201ENST00000263351 DPH3Q96FX2 82 aa11.02□□□□□ -0.65
ZNF541-201ENST00000263351 J3KT08 172 aa11.02□□□□□ -0.65
ZNF541-201ENST00000263351 IGHV4-30-4P0DP06 118 aa11.02□□□□□ -0.65
ZNF541-201ENST00000263351 LINC01547P58512 204 aaPredicted RBP11.02□□□□□ -0.65
ZNF541-201ENST00000263351 Q6ZVQ6 151 aa11.02□□□□□ -0.65
ZNF541-201ENST00000263351 ZNF561-AS1K7EIQ3 104 aa11.01□□□□□ -0.65
ZNF541-201ENST00000263351 A0A0J9YWU9 116 aa11.01□□□□□ -0.65
ZNF541-201ENST00000263351 C9orf66Q5T8R8 295 aa11.01□□□□□ -0.65
ZNF541-201ENST00000263351 LYPD5Q6UWN5 251 aa11.01□□□□□ -0.65
ZNF541-201ENST00000263351 PRR34Q9NV39 138 aa11.01□□□□□ -0.65
ZNF541-201ENST00000263351 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11□□□□□ -0.65
ZNF541-201ENST00000263351 SPART-AS1P0CW21 52 aa10.99□□□□□ -0.65
ZNF541-201ENST00000263351 Q8N9L7 120 aa10.99□□□□□ -0.65
ZNF541-201ENST00000263351 APOC4P55056 127 aa10.98□□□□□ -0.65
ZNF541-201ENST00000263351 Q6ZRU5 148 aa10.98□□□□□ -0.65
ZNF541-201ENST00000263351 SNURFQ9Y675 71 aa10.98□□□□□ -0.65
ZNF541-201ENST00000263351 CSMD3Q7Z407 3707 aa10.98□□□□□ -0.65
ZNF541-201ENST00000263351 ZNF73O43830 326 aaPredicted RBP10.98□□□□□ -0.65
ZNF541-201ENST00000263351 MUC7Q8TAX7 377 aa10.97□□□□□ -0.65
ZNF541-201ENST00000263351 DIRC1Q969H9 104 aa10.97□□□□□ -0.65
ZNF541-201ENST00000263351 KMT2BQ9UMN6 2715 aaPredicted RBP10.97□□□□□ -0.65
ZNF541-201ENST00000263351 CAMK2N2Q96S95 79 aa10.96□□□□□ -0.65
ZNF541-201ENST00000263351 OXLD1Q5BKU9 147 aa10.95□□□□□ -0.66
ZNF541-201ENST00000263351 MIFP14174 115 aa10.94□□□□□ -0.66
ZNF541-201ENST00000263351 LOC110117498A0A087WWA1 95 aa10.94□□□□□ -0.66
ZNF541-201ENST00000263351 VPREB1P12018 145 aa10.94□□□□□ -0.66
ZNF541-201ENST00000263351 TMEM258P61165 79 aa10.94□□□□□ -0.66
ZNF541-201ENST00000263351 Q6ZTC4 211 aa10.94□□□□□ -0.66
ZNF541-201ENST00000263351 COX7BP24311 80 aa10.93□□□□□ -0.66
ZNF541-201ENST00000263351 C4orf26Q17RF5 130 aa10.93□□□□□ -0.66
ZNF541-201ENST00000263351 C15orf56Q8N910 161 aa10.93□□□□□ -0.66
ZNF541-201ENST00000263351 RMI2Q96E14 147 aa10.93□□□□□ -0.66
ZNF541-201ENST00000263351 KPRPQ5T749 579 aaPredicted RBP10.92□□□□□ -0.66
ZNF541-201ENST00000263351 LYSTQ99698 3801 aa10.92□□□□□ -0.66
ZNF541-201ENST00000263351 ATP5EP2Q5VTU8 51 aa10.92□□□□□ -0.66
ZNF541-201ENST00000263351 COL6A5A8TX70 2615 aa10.92□□□□□ -0.66
ZNF541-201ENST00000263351 KRTAP26-1Q6PEX3 210 aa10.91□□□□□ -0.66
ZNF541-201ENST00000263351 Q6ZRP5 223 aa10.91□□□□□ -0.66
ZNF541-201ENST00000263351 DEFB105AQ8NG35 78 aa10.9□□□□□ -0.66
ZNF541-201ENST00000263351 TM2D3Q9BRN9 247 aa10.9□□□□□ -0.66
ZNF541-201ENST00000263351 ELOF1P60002 83 aaKnown RBP10.9□□□□□ -0.66
ZNF541-201ENST00000263351 J3QKU1 62 aa10.89□□□□□ -0.67
ZNF541-201ENST00000263351 CMYA5Q8N3K9 4069 aa10.88□□□□□ -0.67
ZNF541-201ENST00000263351 ESRGQ1W209 222 aa10.88□□□□□ -0.67
ZNF541-201ENST00000263351 TRBV7-4A0A0J9YYF1 115 aa10.88□□□□□ -0.67
ZNF541-201ENST00000263351 C3orf84H3BNL1 204 aa10.88□□□□□ -0.67
ZNF541-201ENST00000263351 GVQW2A0A096LPI5 108 aaPredicted RBP10.87□□□□□ -0.67
ZNF541-201ENST00000263351 IGKV2D-24A0A075B6R9 120 aa10.86□□□□□ -0.67
ZNF541-201ENST00000263351 H7BZZ5 65 aa10.86□□□□□ -0.67
ZNF541-201ENST00000263351 BPY2O14599 106 aa10.86□□□□□ -0.67
ZNF541-201ENST00000263351 KRTAP10-11P60412 298 aa10.86□□□□□ -0.67
ZNF541-201ENST00000263351 SERTAD4-AS1Q5TG53 156 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms