RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 MAST4O15021 2626 aa6.47□□□□□ -1.37
RPA1-201ENST00000254719 A0A087WZ39 114 aa6.47□□□□□ -1.37
RPA1-201ENST00000254719 H3BS24 57 aa6.46□□□□□ -1.37
RPA1-201ENST00000254719 RPL28P46779 137 aaKnown RBP6.46□□□□□ -1.37
RPA1-201ENST00000254719 Q9HAA7 133 aa6.46□□□□□ -1.37
RPA1-201ENST00000254719 C22orf24Q9Y442 160 aa6.46□□□□□ -1.37
RPA1-201ENST00000254719 FUSP35637 526 aaKnown RBP eCLIP6.46□□□□□ -1.38
RPA1-201ENST00000254719 A0A1B0GUV1 79 aa6.45□□□□□ -1.38
RPA1-201ENST00000254719 COX7BP24311 80 aa6.45□□□□□ -1.38
RPA1-201ENST00000254719 IGLV5-45A0A087WSX0 123 aa6.45□□□□□ -1.38
RPA1-201ENST00000254719 IGLV5-39A0A0G2JS06 123 aa6.45□□□□□ -1.38
RPA1-201ENST00000254719 ETDCA0A1B0GVM5 59 aa6.44□□□□□ -1.38
RPA1-201ENST00000254719 BAHCC1Q9P281 2608 aa6.44□□□□□ -1.38
RPA1-201ENST00000254719 A0A087WVE0 104 aa6.44□□□□□ -1.38
RPA1-201ENST00000254719 IGKV3D-7A0A0C4DH55 119 aa6.44□□□□□ -1.38
RPA1-201ENST00000254719 SMCR5Q8TEV8 140 aa6.44□□□□□ -1.38
RPA1-201ENST00000254719 ATRQ13535 2644 aa6.44□□□□□ -1.38
RPA1-201ENST00000254719 DNHD1Q96M86 4753 aa6.43□□□□□ -1.38
RPA1-201ENST00000254719 UQCRQO14949 82 aa6.43□□□□□ -1.38
RPA1-201ENST00000254719 NCR3O14931 201 aa6.43□□□□□ -1.38
RPA1-201ENST00000254719 FHL2Q14192 279 aa6.43□□□□□ -1.38
RPA1-201ENST00000254719 VPS13DQ5THJ4 4388 aa6.43□□□□□ -1.38
RPA1-201ENST00000254719 NBEAL1Q6ZS30 2694 aa6.43□□□□□ -1.38
RPA1-201ENST00000254719 FAM19A3Q7Z5A8 133 aa6.43□□□□□ -1.38
RPA1-201ENST00000254719 IGHV4-28A0A0C4DH34 117 aa6.42□□□□□ -1.38
RPA1-201ENST00000254719 F8WDY8 70 aa6.42□□□□□ -1.38
RPA1-201ENST00000254719 NDUFC2O95298 119 aa6.42□□□□□ -1.38
RPA1-201ENST00000254719 SDIM1Q6ZPB5 146 aa6.42□□□□□ -1.38
RPA1-201ENST00000254719 WFDC9Q8NEX5 89 aa6.42□□□□□ -1.38
RPA1-201ENST00000254719 C14orf132Q9NPU4 83 aa6.42□□□□□ -1.38
RPA1-201ENST00000254719 LY6G6DO95868 133 aa6.41□□□□□ -1.38
RPA1-201ENST00000254719 SMIM11BQ8TCY0 68 aa6.41□□□□□ -1.38
RPA1-201ENST00000254719 C9orf129Q5T035 196 aaKnown RBP6.41□□□□□ -1.38
RPA1-201ENST00000254719 LOC100131303A0A0U1RQF7 123 aa6.41□□□□□ -1.38
RPA1-201ENST00000254719 SOSTDC1Q6X4U4 206 aa6.41□□□□□ -1.38
RPA1-201ENST00000254719 DEFB4AO15263 64 aa6.4□□□□□ -1.38
RPA1-201ENST00000254719 RPL18AQ02543 176 aaKnown RBP6.4□□□□□ -1.38
RPA1-201ENST00000254719 NREPQ16612 68 aa6.4□□□□□ -1.38
RPA1-201ENST00000254719 C11orf45Q8TAV5 145 aa6.4□□□□□ -1.38
RPA1-201ENST00000254719 LINC01600Q96MT4 127 aa6.4□□□□□ -1.39
RPA1-201ENST00000254719 C14orf177Q52M58 125 aa6.39□□□□□ -1.39
RPA1-201ENST00000254719 SERTAD4-AS1Q5TG53 156 aa6.39□□□□□ -1.39
RPA1-201ENST00000254719 FAM19A5Q7Z5A7 132 aaPredicted RBP6.39□□□□□ -1.39
RPA1-201ENST00000254719 LINC00482Q8N8I6 264 aa6.39□□□□□ -1.39
RPA1-201ENST00000254719 DNAH8Q96JB1 4490 aa6.39□□□□□ -1.39
RPA1-201ENST00000254719 INAFM1C9JVW0 142 aa6.39□□□□□ -1.39
RPA1-201ENST00000254719 C6orf99Q4VX62 202 aa6.39□□□□□ -1.39
RPA1-201ENST00000254719 RETNQ9HD89 108 aa6.39□□□□□ -1.39
RPA1-201ENST00000254719 Q6JHZ5 121 aa6.39□□□□□ -1.39
RPA1-201ENST00000254719 SLPIP03973 132 aa6.38□□□□□ -1.39
RPA1-201ENST00000254719 HIGD2BQ4VC39 106 aa6.38□□□□□ -1.39
RPA1-201ENST00000254719 M0R378 163 aa6.38□□□□□ -1.39
RPA1-201ENST00000254719 CDK2AP2O75956 126 aa6.38□□□□□ -1.39
RPA1-201ENST00000254719 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.38□□□□□ -1.39
RPA1-201ENST00000254719 MRAPQ8TCY5 172 aa6.38□□□□□ -1.39
RPA1-201ENST00000254719 J3KT08 172 aa6.37□□□□□ -1.39
RPA1-201ENST00000254719 SEC61GP60059 68 aa6.37□□□□□ -1.39
RPA1-201ENST00000254719 TENM2Q9NT68 2774 aa6.37□□□□□ -1.39
RPA1-201ENST00000254719 DEFB131BA0A096LNP1 70 aa6.37□□□□□ -1.39
RPA1-201ENST00000254719 C4orf26Q17RF5 130 aa6.37□□□□□ -1.39
RPA1-201ENST00000254719 UBE2BP63146 152 aa6.37□□□□□ -1.39
RPA1-201ENST00000254719 C3orf22Q8N5N4 141 aa6.37□□□□□ -1.39
RPA1-201ENST00000254719 FAM218AQ96MZ4 157 aa6.37□□□□□ -1.39
RPA1-201ENST00000254719 DNAH6Q9C0G6 4158 aa6.37□□□□□ -1.39
RPA1-201ENST00000254719 IGLV4-60A0A075B6I1 120 aa6.36□□□□□ -1.39
RPA1-201ENST00000254719 TRAV23DV6A0A075B6W5 121 aa6.36□□□□□ -1.39
RPA1-201ENST00000254719 V9GYY9 64 aa6.36□□□□□ -1.39
RPA1-201ENST00000254719 EGFEM1PQ0D2K5 195 aa6.36□□□□□ -1.39
RPA1-201ENST00000254719 SYCNQ0VAF6 134 aa6.36□□□□□ -1.39
RPA1-201ENST00000254719 TRAV10A0A0B4J240 114 aa6.36□□□□□ -1.39
RPA1-201ENST00000254719 IGHV3OR16-9A0A0B4J2B5 98 aa6.36□□□□□ -1.39
RPA1-201ENST00000254719 HRCT1Q6UXD1 115 aa6.36□□□□□ -1.39
RPA1-201ENST00000254719 LINC00612Q8N6U2 182 aa6.35□□□□□ -1.39
RPA1-201ENST00000254719 KPRPQ5T749 579 aaPredicted RBP6.35□□□□□ -1.39
RPA1-201ENST00000254719 STAB1Q9NY15 2570 aa6.35□□□□□ -1.39
RPA1-201ENST00000254719 DNAH17Q9UFH2 4485 aa6.34□□□□□ -1.39
RPA1-201ENST00000254719 CCKP06307 115 aa6.34□□□□□ -1.39
RPA1-201ENST00000254719 SERP2Q8N6R1 65 aa6.34□□□□□ -1.39
RPA1-201ENST00000254719 UPK3BQ9BT76 320 aa6.34□□□□□ -1.39
RPA1-201ENST00000254719 SRRM2Q9UQ35 2752 aaKnown RBP6.34□□□□□ -1.39
RPA1-201ENST00000254719 TMEM258P61165 79 aa6.34□□□□□ -1.4
RPA1-201ENST00000254719 Q8NDZ9 215 aa6.34□□□□□ -1.4
RPA1-201ENST00000254719 DHRS4-AS1Q9P1J3 65 aa6.34□□□□□ -1.4
RPA1-201ENST00000254719 IGHV4-30-4P0DP06 118 aa6.33□□□□□ -1.4
RPA1-201ENST00000254719 CYSRT1A8MQ03 144 aa6.33□□□□□ -1.4
RPA1-201ENST00000254719 OXTP01178 125 aa6.33□□□□□ -1.4
RPA1-201ENST00000254719 Q8N3U1 123 aa6.33□□□□□ -1.4
RPA1-201ENST00000254719 Q8N814 137 aa6.33□□□□□ -1.4
RPA1-201ENST00000254719 DEFB105AQ8NG35 78 aa6.33□□□□□ -1.4
RPA1-201ENST00000254719 COX7CP15954 63 aa6.33□□□□□ -1.4
RPA1-201ENST00000254719 X6R8D5 127 aa6.33□□□□□ -1.4
RPA1-201ENST00000254719 ALMS1Q8TCU4 4167 aa6.32□□□□□ -1.4
RPA1-201ENST00000254719 MRPL55Q7Z7F7 128 aaKnown RBP6.32□□□□□ -1.4
RPA1-201ENST00000254719 TRBV7-7A0A0K0K1E9 115 aa6.32□□□□□ -1.4
RPA1-201ENST00000254719 C2orf48Q96LS8 159 aa6.32□□□□□ -1.4
RPA1-201ENST00000254719 Q6ZQY7 126 aa6.31□□□□□ -1.4
RPA1-201ENST00000254719 ZNF73O43830 326 aaPredicted RBP6.31□□□□□ -1.4
RPA1-201ENST00000254719 BPY2O14599 106 aa6.31□□□□□ -1.4
RPA1-201ENST00000254719 FAT2Q9NYQ8 4349 aa6.31□□□□□ -1.4
RPA1-201ENST00000254719 NDUFC1O43677 76 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms